; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002848 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002848
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description40S ribosomal protein S20
Genome locationscaffold6:2152195..2153931
RNA-Seq ExpressionSpg002848
SyntenySpg002848
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001848 - Ribosomal protein S10
IPR005729 - Ribosomal protein S10, eukaryotic/archaeal
IPR018268 - Ribosomal protein S10, conserved site
IPR027486 - Ribosomal protein S10 domain
IPR036838 - Ribosomal protein S10 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600158.1 Glutathione S-transferase U17, partial [Cucurbita argyrosperma subsp. sororia]2.1e-5898.36Show/hide
Query:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        M+Y AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

XP_008439109.1 PREDICTED: 40S ribosomal protein S20-2-like [Cucumis melo]2.1e-5898.36Show/hide
Query:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        M+Y AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

XP_022922646.1 40S ribosomal protein S20-2-like isoform X1 [Cucurbita moschata]1.7e-5797.54Show/hide
Query:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        M+Y AMKPTK GLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

XP_022985516.1 40S ribosomal protein S20-2-like [Cucurbita maxima]1.7e-5797.54Show/hide
Query:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        M+Y AMKPTK GLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

XP_038711947.1 40S ribosomal protein S20-2-like [Tripterygium wilfordii]1.3e-5796.67Show/hide
Query:  MSYAMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVV
        M+YAMKPTKPGLE++QEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSS DVV
Subjt:  MSYAMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVV

Query:  KQITSITIEPGVEVEVTIAD
        KQITSITIEPGVEVEVTIAD
Subjt:  KQITSITIEPGVEVEVTIAD

TrEMBL top hitse value%identityAlignment
A0A1S3AXJ9 40S ribosomal protein S20-2-like1.0e-5898.36Show/hide
Query:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        M+Y AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

A0A5A7VKH9 40S ribosomal protein S20-2-like1.0e-5898.36Show/hide
Query:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        M+Y AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

A0A6J1FSX5 40S ribosomal protein S20-2-like1.0e-5898.36Show/hide
Query:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        M+Y AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

A0A6J1IAH1 40S ribosomal protein S20-2-like1.0e-5898.36Show/hide
Query:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        M+Y AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

A0A6J1J8F7 40S ribosomal protein S20-2-like8.4e-5897.54Show/hide
Query:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
        M+Y AMKPTK GLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV
Subjt:  MSY-AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADV

Query:  VKQITSITIEPGVEVEVTIADQ
        VKQITSITIEPGVEVEVTIADQ
Subjt:  VKQITSITIEPGVEVEVTIADQ

SwissProt top hitse value%identityAlignment
P23403 40S ribosomal protein S206.2e-4274.77Show/hide
Query:  DTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVE
        D +  IH+IRITL+S+NVK+LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL S +++VKQITSI+IEPGVE
Subjt:  DTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVE

Query:  VEVTIAD
        VEVTIAD
Subjt:  VEVTIAD

P35686 40S ribosomal protein S203.7e-5085.47Show/hide
Query:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT
        MK  K G E +QE  H+IRITLSSK+VKNLEKVC DLV+GAKDK L+VKGPVRMPTKVLHITTRKSPCGEGTNTWDRFE+RVHKRVIDL SSADVVKQIT
Subjt:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT

Query:  SITIEPGVEVEVTIADQ
        SITIEPGVEVEVTI+DQ
Subjt:  SITIEPGVEVEVTIADQ

P49200 40S ribosomal protein S20-19.3e-5492.24Show/hide
Query:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT
        MKP K GLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQIT
Subjt:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT

Query:  SITIEPGVEVEVTIAD
        SITIEPGVEVEVTIAD
Subjt:  SITIEPGVEVEVTIAD

Q3ZBH8 40S ribosomal protein S208.2e-4270.09Show/hide
Query:  AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQI
        A K T     + +  IH+IRITL+S+NVK+LEKVCADL+RGAK+K L+VKGPVRMPTK L ITTRK+PCGEG+ TWDRF++R+HKR+IDL S +++VKQI
Subjt:  AMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQI

Query:  TSITIEPGVEVEVTIAD
        TSI+IEPGVEVEVTIAD
Subjt:  TSITIEPGVEVEVTIAD

Q9STY6 40S ribosomal protein S20-24.2e-5493.1Show/hide
Query:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT
        MKPTK GLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQIT
Subjt:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT

Query:  SITIEPGVEVEVTIAD
        SITIEPGVEVEVTIAD
Subjt:  SITIEPGVEVEVTIAD

Arabidopsis top hitse value%identityAlignment
AT3G45030.1 Ribosomal protein S10p/S20e family protein6.6e-5592.24Show/hide
Query:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT
        MKP K GLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQIT
Subjt:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT

Query:  SITIEPGVEVEVTIAD
        SITIEPGVEVEVTIAD
Subjt:  SITIEPGVEVEVTIAD

AT3G47370.1 Ribosomal protein S10p/S20e family protein3.0e-5593.1Show/hide
Query:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT
        MKPTK GLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQIT
Subjt:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT

Query:  SITIEPGVEVEVTIAD
        SITIEPGVEVEVTIAD
Subjt:  SITIEPGVEVEVTIAD

AT3G47370.2 Ribosomal protein S10p/S20e family protein3.0e-5593.1Show/hide
Query:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT
        MKPTK GLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQIT
Subjt:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT

Query:  SITIEPGVEVEVTIAD
        SITIEPGVEVEVTIAD
Subjt:  SITIEPGVEVEVTIAD

AT3G47370.3 Ribosomal protein S10p/S20e family protein3.0e-5593.1Show/hide
Query:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT
        MKPTK GLE   EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQIT
Subjt:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT

Query:  SITIEPGVEVEVTIAD
        SITIEPGVEVEVTIAD
Subjt:  SITIEPGVEVEVTIAD

AT5G62300.1 Ribosomal protein S10p/S20e family protein6.6e-5592.24Show/hide
Query:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT
        MKP K GLE+  EQIHKIRITLSSKNVKNLEKVC DLVRGAKDKRLRVKGPVRMPTKVL ITTRK+PCGEGTNTWDRFELRVHKRVIDLFSS DVVKQIT
Subjt:  MKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQIT

Query:  SITIEPGVEVEVTIAD
        SITIEPGVEVEVTIAD
Subjt:  SITIEPGVEVEVTIAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTACGCAATGAAACCGACTAAGCCAGGCTTAGAAGATACGCAAGAGCAAATCCATAAGATCAGGATTACTCTCTCCTCCAAAAATGTTAAGAACCTTGAGAAAGT
TTGTGCCGACTTGGTTCGTGGTGCCAAGGACAAGAGGTTGAGGGTCAAGGGACCAGTAAGAATGCCTACCAAGGTTCTTCACATTACAACCAGAAAATCTCCATGTGGTG
AAGGTACCAACACATGGGACAGATTTGAGCTTCGTGTCCACAAACGAGTTATCGACCTATTCAGCTCTGCTGATGTAGTGAAGCAGATTACCTCCATCACCATTGAACCT
GGTGTGGAGGTTGAGGTCACCATTGCCGATCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGTACGCAATGAAACCGACTAAGCCAGGCTTAGAAGATACGCAAGAGCAAATCCATAAGATCAGGATTACTCTCTCCTCCAAAAATGTTAAGAACCTTGAGAAAGT
TTGTGCCGACTTGGTTCGTGGTGCCAAGGACAAGAGGTTGAGGGTCAAGGGACCAGTAAGAATGCCTACCAAGGTTCTTCACATTACAACCAGAAAATCTCCATGTGGTG
AAGGTACCAACACATGGGACAGATTTGAGCTTCGTGTCCACAAACGAGTTATCGACCTATTCAGCTCTGCTGATGTAGTGAAGCAGATTACCTCCATCACCATTGAACCT
GGTGTGGAGGTTGAGGTCACCATTGCCGATCAATGA
Protein sequenceShow/hide protein sequence
MSYAMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEP
GVEVEVTIADQ