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Spg002874 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002874
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCWF19-like protein 2-like protein
Genome locationscaffold6:82304..83782
RNA-Seq ExpressionSpg002874
SyntenySpg002874
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649297.1 hypothetical protein Csa_015271, partial [Cucumis sativus]8.3e-0830.5Show/hide
Query:  HFLKKNRDDFGVTRLSKFKSSAGWNIECAAWPPTEGRKLIQVPMGTSKRGWLIFWEMLRNF--LLKFEV-------MNQYEKTPLNPSSIKVNYIDRN--
        +F KK + + G    S+F++ +GW + C +WP T GR  I++P+G  K+ W  F +ML +F  +L++++        N   K P N   +++N + +N  
Subjt:  HFLKKNRDDFGVTRLSKFKSSAGWNIECAAWPPTEGRKLIQVPMGTSKRGWLIFWEMLRNF--LLKFEV-------MNQYEKTPLNPSSIKVNYIDRN--

Query:  YANI-ISSN---IKESNAV--HQMNPVKENFALINTMKHSS
        +  + ISSN   I  +N++   Q NP K +  L+N +   S
Subjt:  YANI-ISSN---IKESNAV--HQMNPVKENFALINTMKHSS
TYK14531.1 CWF19-like protein 2-like protein [Cucumis melo var. makuwa]1.9e-0425.74Show/hide
Query:  DFGVTRLSKFKSSAGWNIECAAWPPTEGRKLIQVPMGTSKRGWLIFWEMLRNFLLKFEVMNQYEKTPLNPSSIKVNYIDRNYANIISSNI--KESNAVHQ
        D G  ++SK +  AGW + C  WP + G   I+V     K+GW     ML++FL K    ++     L   ++ ++Y+ R    +IS +    ++ A   
Subjt:  DFGVTRLSKFKSSAGWNIECAAWPPTEGRKLIQVPMGTSKRGWLIFWEMLRNFLLKFEVMNQYEKTPLNPSSIKVNYIDRNYANIISSNI--KESNAVHQ

Query:  MNPVKENFALINTMKHSSFWVRKSNEVSPGLFGGIW
        +NP     A I   ++   +V  + E++    G I+
Subjt:  MNPVKENFALINTMKHSSFWVRKSNEVSPGLFGGIW
TrEMBL top hitse value%identityAlignment
A0A5D3CRV4 CWF19-like protein 2-like protein9.2e-0525.74Show/hide
Query:  DFGVTRLSKFKSSAGWNIECAAWPPTEGRKLIQVPMGTSKRGWLIFWEMLRNFLLKFEVMNQYEKTPLNPSSIKVNYIDRNYANIISSNI--KESNAVHQ
        D G  ++SK +  AGW + C  WP + G   I+V     K+GW     ML++FL K    ++     L   ++ ++Y+ R    +IS +    ++ A   
Subjt:  DFGVTRLSKFKSSAGWNIECAAWPPTEGRKLIQVPMGTSKRGWLIFWEMLRNFLLKFEVMNQYEKTPLNPSSIKVNYIDRNYANIISSNI--KESNAVHQ

Query:  MNPVKENFALINTMKHSSFWVRKSNEVSPGLFGGIW
        +NP     A I   ++   +V  + E++    G I+
Subjt:  MNPVKENFALINTMKHSSFWVRKSNEVSPGLFGGIW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTTTTACCATCGTATTGGCACTTTCTTAAGAAAAACAGGGATGATTTTGGGGTCACTCGTTTATCAAAGTTTAAATCTTCTGCTGGTTGGAACATTGAATGTGC
AGCTTGGCCACCTACTGAAGGACGTAAGTTAATTCAAGTGCCTATGGGGACCTCGAAAAGAGGATGGCTTATCTTTTGGGAAATGTTAAGAAACTTCCTTTTAAAGTTTG
AAGTTATGAACCAATATGAAAAGACTCCTCTTAATCCGTCATCGATCAAAGTCAATTACATTGATAGGAACTATGCAAATATAATTTCATCGAATATAAAGGAGTCCAAT
GCAGTACATCAGATGAATCCAGTGAAAGAGAATTTTGCTTTGATTAACACTATGAAACATAGTTCATTTTGGGTTAGAAAGTCTAATGAGGTGTCACCCGGGTTATTTGG
AGGGATATGGCGGGTGGATATCGATCAAGAACTTGCCCTTGCCCTAATGGAAGCATCAACCTTTCGAAGCAATTGGGAAATATTTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGCTTTTACCATCGTATTGGCACTTTCTTAAGAAAAACAGGGATGATTTTGGGGTCACTCGTTTATCAAAGTTTAAATCTTCTGCTGGTTGGAACATTGAATGTGC
AGCTTGGCCACCTACTGAAGGACGTAAGTTAATTCAAGTGCCTATGGGGACCTCGAAAAGAGGATGGCTTATCTTTTGGGAAATGTTAAGAAACTTCCTTTTAAAGTTTG
AAGTTATGAACCAATATGAAAAGACTCCTCTTAATCCGTCATCGATCAAAGTCAATTACATTGATAGGAACTATGCAAATATAATTTCATCGAATATAAAGGAGTCCAAT
GCAGTACATCAGATGAATCCAGTGAAAGAGAATTTTGCTTTGATTAACACTATGAAACATAGTTCATTTTGGGTTAGAAAGTCTAATGAGGTGTCACCCGGGTTATTTGG
AGGGATATGGCGGGTGGATATCGATCAAGAACTTGCCCTTGCCCTAATGGAAGCATCAACCTTTCGAAGCAATTGGGAAATATTTTGGTGA
Protein sequenceShow/hide protein sequence
MMLLPSYWHFLKKNRDDFGVTRLSKFKSSAGWNIECAAWPPTEGRKLIQVPMGTSKRGWLIFWEMLRNFLLKFEVMNQYEKTPLNPSSIKVNYIDRNYANIISSNIKESN
AVHQMNPVKENFALINTMKHSSFWVRKSNEVSPGLFGGIWRVDIDQELALALMEASTFRSNWEIFW