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Spg002886 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002886
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold6:4237641..4238428
RNA-Seq ExpressionSpg002886
SyntenySpg002886
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044332.1 hypothetical protein E6C27_scaffold46G00550 [Cucumis melo var. makuwa]3.3e-0441.35Show/hide
Query:  MNMIKNIVIVLAMAVMLLVATSTQAAITSKEFNQVIELRSNETS-GVGSDRDTSSRKMLKNG-AVGLGNIVVCPSQGAPCLGDDYCLPGCFCDYSRPVKL
        M ++   V  LAMAV++L+A S  A  TS E ++VIEL S+E +  V ++ +  SRKM+K G   G GN  +C   G PC  D+ C  GC C  +  +KL
Subjt:  MNMIKNIVIVLAMAVMLLVATSTQAAITSKEFNQVIELRSNETS-GVGSDRDTSSRKMLKNG-AVGLGNIVVCPSQGAPCLGDDYCLPGCFCDYSRPVKL

Query:  GFCN
        G C+
Subjt:  GFCN
TYK29461.1 hypothetical protein E5676_scaffold655G00550 [Cucumis melo var. makuwa]2.0e-0441.35Show/hide
Query:  MNMIKNIVIVLAMAVMLLVATSTQAAITSKEFNQVIELRSNETS-GVGSDRDTSSRKMLKNG-AVGLGNIVVCPSQGAPCLGDDYCLPGCFCDYSRPVKL
        M ++   V +LAMAV++L+A S  A  TS E ++VIEL S+E +  V ++ +  SRKM+K G   G GN  +C   G PC  D+ C  GC C  +  +KL
Subjt:  MNMIKNIVIVLAMAVMLLVATSTQAAITSKEFNQVIELRSNETS-GVGSDRDTSSRKMLKNG-AVGLGNIVVCPSQGAPCLGDDYCLPGCFCDYSRPVKL

Query:  GFCN
        G C+
Subjt:  GFCN
TrEMBL top hitse value%identityAlignment
A0A5A7TM06 Uncharacterized protein1.6e-0441.35Show/hide
Query:  MNMIKNIVIVLAMAVMLLVATSTQAAITSKEFNQVIELRSNETS-GVGSDRDTSSRKMLKNG-AVGLGNIVVCPSQGAPCLGDDYCLPGCFCDYSRPVKL
        M ++   V  LAMAV++L+A S  A  TS E ++VIEL S+E +  V ++ +  SRKM+K G   G GN  +C   G PC  D+ C  GC C  +  +KL
Subjt:  MNMIKNIVIVLAMAVMLLVATSTQAAITSKEFNQVIELRSNETS-GVGSDRDTSSRKMLKNG-AVGLGNIVVCPSQGAPCLGDDYCLPGCFCDYSRPVKL

Query:  GFCN
        G C+
Subjt:  GFCN
A0A5D3E1J3 Uncharacterized protein9.5e-0541.35Show/hide
Query:  MNMIKNIVIVLAMAVMLLVATSTQAAITSKEFNQVIELRSNETS-GVGSDRDTSSRKMLKNG-AVGLGNIVVCPSQGAPCLGDDYCLPGCFCDYSRPVKL
        M ++   V +LAMAV++L+A S  A  TS E ++VIEL S+E +  V ++ +  SRKM+K G   G GN  +C   G PC  D+ C  GC C  +  +KL
Subjt:  MNMIKNIVIVLAMAVMLLVATSTQAAITSKEFNQVIELRSNETS-GVGSDRDTSSRKMLKNG-AVGLGNIVVCPSQGAPCLGDDYCLPGCFCDYSRPVKL

Query:  GFCN
        G C+
Subjt:  GFCN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACATGATCAAGAACATCGTCATCGTGCTTGCAATGGCAGTCATGCTGCTCGTGGCCACTTCGACCCAAGCAGCCATTACTAGTAAGGAGTTTAACCAAGTGATCGA
ACTCCGTTCCAATGAGACGAGCGGAGTTGGTTCGGACAGGGACACTTCCTCAAGAAAAATGTTGAAAAATGGAGCAGTCGGACTTGGGAATATTGTGGTATGCCCGTCCC
AAGGCGCCCCATGTCTCGGCGATGATTACTGTCTTCCTGGGTGCTTCTGTGATTACTCCCGACCAGTGAAACTGGGATTCTGCAATAGTTTGGTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAACATGATCAAGAACATCGTCATCGTGCTTGCAATGGCAGTCATGCTGCTCGTGGCCACTTCGACCCAAGCAGCCATTACTAGTAAGGAGTTTAACCAAGTGATCGA
ACTCCGTTCCAATGAGACGAGCGGAGTTGGTTCGGACAGGGACACTTCCTCAAGAAAAATGTTGAAAAATGGAGCAGTCGGACTTGGGAATATTGTGGTATGCCCGTCCC
AAGGCGCCCCATGTCTCGGCGATGATTACTGTCTTCCTGGGTGCTTCTGTGATTACTCCCGACCAGTGAAACTGGGATTCTGCAATAGTTTGGTTGAATGA
Protein sequenceShow/hide protein sequence
MNMIKNIVIVLAMAVMLLVATSTQAAITSKEFNQVIELRSNETSGVGSDRDTSSRKMLKNGAVGLGNIVVCPSQGAPCLGDDYCLPGCFCDYSRPVKLGFCNSLVE