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Spg002897 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002897
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLRRNT_2 domain-containing protein
Genome locationscaffold6:5662383..5663576
RNA-Seq ExpressionSpg002897
SyntenySpg002897
Gene Ontology termsNA
InterPro domainsIPR013210 - Leucine-rich repeat-containing N-terminal, plant-type
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024442689.1 receptor-like protein EIX2 isoform X1 [Populus trichocarpa]1.1e-0846.15Show/hide
Query:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
        IE ERQALL FK D++D D +LSSW  +EE  D     G   D +    TGH+ +L+LH+S  Y++++  L  K+ +SL+ L HL YLDLS
Subjt:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
XP_024442690.1 receptor-like protein EIX2 isoform X2 [Populus trichocarpa]1.1e-0846.15Show/hide
Query:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
        IE ERQALL FK D++D D +LSSW  +EE  D     G   D +    TGH+ +L+LH+S  Y++++  L  K+ +SL+ L HL YLDLS
Subjt:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
XP_024442693.1 receptor-like protein EIX1 isoform X4 [Populus trichocarpa]1.1e-0846.15Show/hide
Query:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
        IE ERQALL FK D++D D +LSSW  +EE  D     G   D +    TGH+ +L+LH+S  Y++++  L  K+ +SL+ L HL YLDLS
Subjt:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
XP_024442694.1 receptor-like protein EIX2 isoform X1 [Populus trichocarpa]1.1e-0846.15Show/hide
Query:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
        IE ERQALL FK D++D D +LSSW  +EE  D     G   D +    TGH+ +L+LH+S  Y++++  L  K+ +SL+ L HL YLDLS
Subjt:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
XP_024442696.1 receptor-like protein EIX2 isoform X3 [Populus trichocarpa]1.1e-0846.15Show/hide
Query:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
        IE ERQALL FK D++D D +LSSW  +EE  D     G   D +    TGH+ +L+LH+S  Y++++  L  K+ +SL+ L HL YLDLS
Subjt:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
TrEMBL top hitse value%identityAlignment
A0A0A0L6M8 LRRNT_2 domain-containing protein1.2e-0848.35Show/hide
Query:  MKGIESERQALLSFKYDLVDRDNMLSSWKEE-NGDYIVVTGQVFDAVILRSTGHIINLDLHTSYDYNYMYLEDKIGSSLINLSHLIYLDLS
        M+ IE ER ALLSFK  +VD  ++LSSW  + N D     G     +   +  HII LDLH SY+Y + YL  ++ SSL  LSHL YLDLS
Subjt:  MKGIESERQALLSFKYDLVDRDNMLSSWKEE-NGDYIVVTGQVFDAVILRSTGHIINLDLHTSYDYNYMYLEDKIGSSLINLSHLIYLDLS
A0A2K1XGZ4 LRRNT_2 domain-containing protein5.2e-0946.15Show/hide
Query:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
        IE ERQALL FK D++D D +LSSW  +EE  D     G   D +    TGH+ +L+LH+S  Y++++  L  K+ +SL+ L HL YLDLS
Subjt:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
A0A3N7FZW5 LRRNT_2 domain-containing protein5.2e-0946.15Show/hide
Query:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
        IE ERQALL FK D++D D +LSSW  +EE  D     G   D +    TGH+ +L+LH+S  Y++++  L  K+ +SL+ L HL YLDLS
Subjt:  IESERQALLSFKYDLVDRDNMLSSW--KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTS--YDYNYMYLEDKIGSSLINLSHLIYLDLS
A0A540LHN4 LRRNT_2 domain-containing protein2.0e-0852.81Show/hide
Query:  ESERQALLSFKYDLVDRDNMLSSW-KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTSY-DYNY-MYLEDKIGSSLINLSHLIYLDLS
        ESERQALL FK DL D  N LSSW  EE  D    TG V D +    TGHI  L L++SY D+++  +   KI SSL++L HL YLDLS
Subjt:  ESERQALLSFKYDLVDRDNMLSSW-KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTSY-DYNY-MYLEDKIGSSLINLSHLIYLDLS
B7SWJ2 HB04p2.0e-0852.81Show/hide
Query:  ESERQALLSFKYDLVDRDNMLSSW-KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTSY-DYNY-MYLEDKIGSSLINLSHLIYLDLS
        ESERQALL FK DL D  N LSSW  EE  D    TG V D +    TGHI  L L++SY D+++  +   KI SSL++L HL YLDLS
Subjt:  ESERQALLSFKYDLVDRDNMLSSW-KEENGDYIVVTGQVFDAVILRSTGHIINLDLHTSY-DYNY-MYLEDKIGSSLINLSHLIYLDLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34930.1 disease resistance family protein / LRR family protein1.7e-0437.89Show/hide
Query:  KGIESERQALLSFKYDLVDRDNMLSSWKEENGDYIVVTGQVFDAVILRSTGHIINLDLHT------SYDYNYMYLEDKIGSSLINLSHLIYLDLS
        K I +ERQALL+F+  L D  + L SW     D     G + DA     T H++ +DL        S +Y    L  KI  SL  L  L YLDLS
Subjt:  KGIESERQALLSFKYDLVDRDNMLSSWKEENGDYIVVTGQVFDAVILRSTGHIINLDLHT------SYDYNYMYLEDKIGSSLINLSHLIYLDLS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCAGTCGCCAGCCGCCGGCAATCGACGGCAACAGTGAGCTTAGAGAATGACATGAAGGGCATTGAGAGCGAGAGACAAGCACTTCTATCCTTCAAGTATGATCT
TGTAGATAGAGATAACATGCTCTCCTCGTGGAAGGAAGAAAATGGTGATTATATTGTTGTAACTGGACAGGTGTTCGATGCAGTAATACTAAGGTCTACGGGACATATTA
TTAACCTTGATCTTCACACATCATATGATTACAACTATATGTACTTGGAGGATAAGATTGGTTCTTCATTGATTAACTTGTCACACCTCATTTACCTGGACCTTAGTTAT
ATAATTCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCAGTCGCCAGCCGCCGGCAATCGACGGCAACAGTGAGCTTAGAGAATGACATGAAGGGCATTGAGAGCGAGAGACAAGCACTTCTATCCTTCAAGTATGATCT
TGTAGATAGAGATAACATGCTCTCCTCGTGGAAGGAAGAAAATGGTGATTATATTGTTGTAACTGGACAGGTGTTCGATGCAGTAATACTAAGGTCTACGGGACATATTA
TTAACCTTGATCTTCACACATCATATGATTACAACTATATGTACTTGGAGGATAAGATTGGTTCTTCATTGATTAACTTGTCACACCTCATTTACCTGGACCTTAGTTAT
ATAATTCTTTAG
Protein sequenceShow/hide protein sequence
MSPVASRRQSTATVSLENDMKGIESERQALLSFKYDLVDRDNMLSSWKEENGDYIVVTGQVFDAVILRSTGHIINLDLHTSYDYNYMYLEDKIGSSLINLSHLIYLDLSY
IIL