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Spg002909 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002909
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold6:2407601..2408445
RNA-Seq ExpressionSpg002909
SyntenySpg002909
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]9.6e-0654.17Show/hide
Query:  MASTTA---WK-IVFFALLLFAFSVSARNLVGTNYVMPRKARETAVNINDVRSMRLFNQVLDTGWKGNYHPP
        MAS +A   WK +VFFALLL AF+VSAR LVGTN ++ R   E  +  N  R  RL  + LDT W GNY PP
Subjt:  MASTTA---WK-IVFFALLLFAFSVSARNLVGTNYVMPRKARETAVNINDVRSMRLFNQVLDTGWKGNYHPP

KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]9.6e-0654.17Show/hide
Query:  MASTTA---WK-IVFFALLLFAFSVSARNLVGTNYVMPRKARETAVNINDVRSMRLFNQVLDTGWKGNYHPP
        MAS +A   WK +VFFALLL AF+VSAR LVGTN ++ R   E  +  N  R  RL  + LDT W GNY PP
Subjt:  MASTTA---WK-IVFFALLLFAFSVSARNLVGTNYVMPRKARETAVNINDVRSMRLFNQVLDTGWKGNYHPP

KGN57260.1 hypothetical protein Csa_011296 [Cucumis sativus]3.6e-0547.06Show/hide
Query:  STTAWK--IVFFALLLFAFSVSARNLVGTNYVMPRKARETAVNINDVRSMRLFNQVLDTGWKGNYHPP
        ++ AWK  I+FF LLL A+++SAR LV      P    E    +NDV   RLF + LDT W+GNY PP
Subjt:  STTAWK--IVFFALLLFAFSVSARNLVGTNYVMPRKARETAVNINDVRSMRLFNQVLDTGWKGNYHPP

TrEMBL top hitse value%identityAlignment
A0A0A0L5K7 Uncharacterized protein1.8e-0547.06Show/hide
Query:  STTAWK--IVFFALLLFAFSVSARNLVGTNYVMPRKARETAVNINDVRSMRLFNQVLDTGWKGNYHPP
        ++ AWK  I+FF LLL A+++SAR LV      P    E    +NDV   RLF + LDT W+GNY PP
Subjt:  STTAWK--IVFFALLLFAFSVSARNLVGTNYVMPRKARETAVNINDVRSMRLFNQVLDTGWKGNYHPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACCACAGCTTGGAAGATTGTCTTCTTTGCTTTGCTTCTCTTTGCTTTCAGCGTTTCTGCAAGAAATCTTGTTGGAACCAATTATGTAATGCCTCGCAAAGC
TCGCGAAACGGCGGTGAATATAAATGATGTGAGGAGCATGAGATTATTTAATCAAGTGCTGGATACCGGTTGGAAGGGAAACTACCATCCTCCCAGAATGTTCAACCACG
AACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACCACAGCTTGGAAGATTGTCTTCTTTGCTTTGCTTCTCTTTGCTTTCAGCGTTTCTGCAAGAAATCTTGTTGGAACCAATTATGTAATGCCTCGCAAAGC
TCGCGAAACGGCGGTGAATATAAATGATGTGAGGAGCATGAGATTATTTAATCAAGTGCTGGATACCGGTTGGAAGGGAAACTACCATCCTCCCAGAATGTTCAACCACG
AACCTTGA
Protein sequenceShow/hide protein sequence
MASTTAWKIVFFALLLFAFSVSARNLVGTNYVMPRKARETAVNINDVRSMRLFNQVLDTGWKGNYHPPRMFNHEP