CuGenDBv2

Gene ID	Spg002926
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Pentatricopeptide repeat-containing protein
Genome location	scaffold6:1157209..1157634
RNA-Seq Expression	Spg002926
Synteny	Spg002926
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008439275.1 PREDICTED: uncharacterized protein LOC103484107 [Cucumis melo]

6.7e-61

87.94

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Query:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
        MKSYAP ADFS FDH     QSKPKASRAGDF PVYVA+GMIALSV LGLHTAKQQLA+SPSVSVRKKRRETIPEV EPEHVAEETEKFFAKSFFRKVAH
Subjt:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH

Query:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN
        VQE+EKFGDY VPYDPLLGDAYAH HRTE+LKSVGIDPA N
Subjt:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN

XP_022945500.1 uncharacterized protein LOC111449717 [Cucurbita moschata]

3.1e-66

92.2

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Query:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
        MKSYAPAADFSRFDH+YQQQQSKPKASRAGDF PVYVA+G+IALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
Subjt:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH

Query:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN
        VQELEK  +Y VPYDP LGDAYAHRHRTETL+SVG+DPASN
Subjt:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN

XP_022968331.1 uncharacterized protein LOC111467595 [Cucurbita maxima]

7.7e-65

91.49

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Query:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
        MKSYAPAADFSRFDH YQQQQSK KASRAGDF PVYVA+G+IALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
Subjt:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH

Query:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN
        VQELEK  +Y VPYDP LGDAYAHRHRTETL+SVG+DPASN
Subjt:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN

XP_023542210.1 uncharacterized protein LOC111802176 [Cucurbita pepo subsp. pepo]

2.6e-65

91.49

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Query:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
        MKSYAPAADFSRFD +YQQQQSKPKASRAGDF PVYVA+G+IALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
Subjt:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH

Query:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN
        VQELEK  +Y VPYDP LGDAYAHRHRTETL+SVG+DPASN
Subjt:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN

XP_038877441.1 uncharacterized protein LOC120069725 [Benincasa hispida]

9.7e-68

93.62

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Query:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
        MKSYAPAADFSRFDHH++QQQSKPKASRAGDF PVYVA+GMIALSV LGLHTAKQQLAHSPSVSVRKKRRETIPEV EPEHVAEETEKFFAKSFFRKVAH
Subjt:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH

Query:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN
        VQE+EKFGDY VPYDPLLGDAYAH HRTETLKSVGIDPASN
Subjt:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L610 Uncharacterized protein

5.6e-61

87.23

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Query:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
        MKSYAP ADFS F H     QSKPKASRAGDF PVYVA+GMIALSV LGLHTAKQQLAHSPSVSVRKKRRETIPEV EPEHVAEETEKFFAKSFFRKVAH
Subjt:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH

Query:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN
        +QE+EKFGDY VPYDPLLGDAYAH HRTE+LKSVGIDPA N
Subjt:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN

A0A1S3AZ27 uncharacterized protein LOC103484107

3.3e-61

87.94

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Query:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
        MKSYAP ADFS FDH     QSKPKASRAGDF PVYVA+GMIALSV LGLHTAKQQLA+SPSVSVRKKRRETIPEV EPEHVAEETEKFFAKSFFRKVAH
Subjt:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH

Query:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN
        VQE+EKFGDY VPYDPLLGDAYAH HRTE+LKSVGIDPA N
Subjt:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN

A0A5D3DHE3 Uncharacterized protein

3.3e-61

87.94

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Query:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
        MKSYAP ADFS FDH     QSKPKASRAGDF PVYVA+GMIALSV LGLHTAKQQLA+SPSVSVRKKRRETIPEV EPEHVAEETEKFFAKSFFRKVAH
Subjt:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH

Query:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN
        VQE+EKFGDY VPYDPLLGDAYAH HRTE+LKSVGIDPA N
Subjt:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN

A0A6J1G139 uncharacterized protein LOC111449717

1.5e-66

92.2

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Query:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
        MKSYAPAADFSRFDH+YQQQQSKPKASRAGDF PVYVA+G+IALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
Subjt:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH

Query:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN
        VQELEK  +Y VPYDP LGDAYAHRHRTETL+SVG+DPASN
Subjt:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN

A0A6J1HUK3 uncharacterized protein LOC111467595

3.7e-65

91.49

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Query:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
        MKSYAPAADFSRFDH YQQQQSK KASRAGDF PVYVA+G+IALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH
Subjt:  MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAH

Query:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN
        VQELEK  +Y VPYDP LGDAYAHRHRTETL+SVG+DPASN
Subjt:  VQELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDPASN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G63060.1 unknown protein

3.2e-16

36.97

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Query:  QQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAHVQELEKFGDYSVPYDPLLG
        +Q+  K S  G+F PV +  G + L+V +  H+ KQQL H+P++S RK RR  + EV +PE+     +KF  KS+ RKV  +Q+  K    ++  DP   
Subjt:  QQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAHVQELEKFGDYSVPYDPLLG

Query:  DAYAHRHRTETLKSVGIDP
        + +      ETL SVG+ P
Subjt:  DAYAHRHRTETLKSVGIDP

AT5G07330.1 unknown protein

6.4e-25

43.8

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Query:  KSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAHV
        K+Y+ AA       +  Q+ +   A+  GDF PVYV++G+I+LSV  G++TA   L  +P V V KK RET+PE+ +P+ V  E ++F  +S+FRK+AHV
Subjt:  KSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAHV

Query:  QELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDP
        QE +K     V  DP+  D +AH+ R  TLK VG+DP
Subjt:  QELEKFGDYSVPYDPLLGDAYAHRHRTETLKSVGIDP

Sequences

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CDS sequence

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ATGAAATCGTACGCGCCGGCGGCTGATTTCTCGCGATTCGATCACCATTACCAGCAGCAACAGAGCAAGCCGAAGGCCTCACGAGCCGGCGATTTTTTCCCCGTCTATGT
AGCGGTTGGAATGATCGCGCTCTCTGTAGCTCTCGGATTGCACACGGCGAAGCAGCAATTGGCTCATTCGCCGTCCGTTTCCGTTCGGAAGAAGCGGAGAGAGACGATTC
CGGAGGTGGCAGAGCCGGAGCACGTGGCGGAGGAGACCGAGAAGTTCTTCGCTAAATCGTTCTTCAGAAAAGTGGCTCACGTTCAGGAACTTGAGAAATTTGGCGATTAT
AGCGTTCCTTACGATCCTCTCCTCGGCGATGCTTATGCTCATCGCCACCGTACTGAGACGCTCAAGTCCGTCGGAATCGATCCCGCTTCGAACTGA

mRNA sequence

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Protein sequence

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MKSYAPAADFSRFDHHYQQQQSKPKASRAGDFFPVYVAVGMIALSVALGLHTAKQQLAHSPSVSVRKKRRETIPEVAEPEHVAEETEKFFAKSFFRKVAHVQELEKFGDY
SVPYDPLLGDAYAHRHRTETLKSVGIDPASN

Spg002926 (gene) of Sponge gourd (cylindrica) v1 genome