; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg002992 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg002992
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionATP-dependent Clp protease ATP-binding subunit clpX
Genome locationscaffold6:1790415..1792435
RNA-Seq ExpressionSpg002992
SyntenySpg002992
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574148.1 hypothetical protein SDJN03_28035, partial [Cucurbita argyrosperma subsp. sororia]4.5e-11384.36Show/hide
Query:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG
        MGCKLN+ N P LFKFPTK  KL GK+ TFCP F ++SQNQE PTIST KTPQTQ+PKS+FSTV+FKSLTACKLGISRYPDFEYNA+GGTGTGSA+ID  
Subjt:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG

Query:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL
        G  G+VSVSFDV TLYIPPLT+QTTKFLGLPLPPFLKIDI+PE FHGNINQESGK+ELEFKAKFLFS+G+VYKAPPLLV+TVLTSEESKGSIR+GKGERL
Subjt:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL

Query:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS
        DEKGKC LVGVA V+PIDDLLLNSFLSLPTECIA LNAIITFS
Subjt:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS

XP_022140932.1 uncharacterized protein LOC111011473 [Momordica charantia]3.3e-10882.3Show/hide
Query:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG
        MGCK+N+ NT ILFKFPTKRA+L GKS TFCPTFSI+SQNQ+ PTIST  T QTQIPKS+ ST+HFK+L ACKLGISRYPDFEYNA+GGTGT SA+ D  
Subjt:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG

Query:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL
        G+G QVSVSFDV TLYIPPLTT+TTKFLGLPLPPFLKIDILPEFFHGNI++ESGKVELEFKAKF+FS+GS+YKAPPLLV+TVLTSEES+GSIR GKGERL
Subjt:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL

Query:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS
        D++GKC LVGVATV+PIDD LLNSFLSLPTECIA LNAII+FS
Subjt:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS

XP_022945057.1 uncharacterized protein LOC111449415 [Cucurbita moschata]1.0e-11284.36Show/hide
Query:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG
        MGCKLN+ N P LFKFPTK  KL GK+ TFCP F ++SQ+QE PTIST KTPQTQIPKS+FSTV+FKSLTACKLGISRYPDFEYNA+GGTGTGSA+ID  
Subjt:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG

Query:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL
        G  G+VSVSFD+ TLYIPPLTTQTTKFLGLPLPPFLKIDI+PE FHGNINQESGK+ELEFKAKFLFS+G+VYKAPPLLV+TVLTSEESKGSIR+GKGERL
Subjt:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL

Query:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS
        DEKGKC LVGVA V+PIDDLLLNSFLSLPTECIA LNAIITFS
Subjt:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS

XP_022968031.1 uncharacterized protein LOC111467398 [Cucurbita maxima]4.1e-11485.19Show/hide
Query:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG
        MGCKLN+ N P+LFKFPTK  KL GK+ T CP F ++SQNQE PTIST KTPQTQIPKS+FSTVHFKSLTACKLGISRYPDFEYNA+GGTGTGSA+ID  
Subjt:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG

Query:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL
        G  G+VSVSFDV TLYIPPLTTQTTKFLGLPLPPFLKIDI+PE FHGNINQESGK+ELEFKAKFLFS+G+VYKAPPLLV+TVLTSEESKGSIR+GKGERL
Subjt:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL

Query:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS
        DEKGKC LVGVA V+PIDDLLLNSFLSLPTECIA LNAIITFS
Subjt:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS

XP_023541386.1 uncharacterized protein LOC111801589 [Cucurbita pepo subsp. pepo]2.6e-11384.77Show/hide
Query:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG
        MGCKLN+ N P LFKFPTK  KL GK+ TFCP F ++SQNQE PTIST KTPQTQIPKS+FSTV+FKSLTACKLGISRYPDFEYNA+GGTGTGSA+ID  
Subjt:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG

Query:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL
        G  G+VSVSFDV TLYIPPLTTQTTKF GLPLPPFLKIDI+PE FHGNINQESGK+ELEFKAKFLFS+G+VYKAPPLLV+TVLTSEESKGSIR+GKGERL
Subjt:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL

Query:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS
        DEKGKC LVGVA V+PIDDLLLNSFLSLPTECIA LNAIITFS
Subjt:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS

TrEMBL top hitse value%identityAlignment
A0A0A0L5S5 Uncharacterized protein4.3e-10178.28Show/hide
Query:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQI-DA
        MGCKLNS NTPILFKF TKR+ L GKSI F PT  +NSQNQE PTI T     T+IPKS+ STVHFKSLTACKLGISR+PDF+YNA+GGTGTGS +I D 
Subjt:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQI-DA

Query:  GGNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGER
         G+  ++ VSFDVDTLYIPPLTTQTTKFLGLPLPPFLKID+LPEFF G+INQESGKVELEF++KF+FSIGS+Y+APPLLV+TVL+SEES+G IR+GKGER
Subjt:  GGNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGER

Query:  LDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS
        LD+ G C LVGVATV+PIDDL LNSFLSLPTECIANLNAIITFS
Subjt:  LDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS

A0A5A7SWH7 Uncharacterized protein1.6e-10078.28Show/hide
Query:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQI-DA
        MGCKLNS NTPILFKF TKR+KL GKSI F PT  +N+QNQE P         T+IPKS+ STVHFKSLTACKLGISR+PDF YNA+GGTGTGS +I D 
Subjt:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQI-DA

Query:  GGNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGER
          +  ++ VSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFF G+INQESGKVELEF++KF+FSIGS+YKAPPLLV+TVL+SEES+G IR+GKGER
Subjt:  GGNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGER

Query:  LDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS
        LD+KGKC LVGVATV+PIDDL LNSFLSLPTECIANLNAIITFS
Subjt:  LDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS

A0A6J1CIF5 uncharacterized protein LOC1110114731.6e-10882.3Show/hide
Query:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG
        MGCK+N+ NT ILFKFPTKRA+L GKS TFCPTFSI+SQNQ+ PTIST  T QTQIPKS+ ST+HFK+L ACKLGISRYPDFEYNA+GGTGT SA+ D  
Subjt:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG

Query:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL
        G+G QVSVSFDV TLYIPPLTT+TTKFLGLPLPPFLKIDILPEFFHGNI++ESGKVELEFKAKF+FS+GS+YKAPPLLV+TVLTSEES+GSIR GKGERL
Subjt:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL

Query:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS
        D++GKC LVGVATV+PIDD LLNSFLSLPTECIA LNAII+FS
Subjt:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS

A0A6J1FZW3 uncharacterized protein LOC1114494154.8e-11384.36Show/hide
Query:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG
        MGCKLN+ N P LFKFPTK  KL GK+ TFCP F ++SQ+QE PTIST KTPQTQIPKS+FSTV+FKSLTACKLGISRYPDFEYNA+GGTGTGSA+ID  
Subjt:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG

Query:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL
        G  G+VSVSFD+ TLYIPPLTTQTTKFLGLPLPPFLKIDI+PE FHGNINQESGK+ELEFKAKFLFS+G+VYKAPPLLV+TVLTSEESKGSIR+GKGERL
Subjt:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL

Query:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS
        DEKGKC LVGVA V+PIDDLLLNSFLSLPTECIA LNAIITFS
Subjt:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS

A0A6J1HTQ8 uncharacterized protein LOC1114673982.0e-11485.19Show/hide
Query:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG
        MGCKLN+ N P+LFKFPTK  KL GK+ T CP F ++SQNQE PTIST KTPQTQIPKS+FSTVHFKSLTACKLGISRYPDFEYNA+GGTGTGSA+ID  
Subjt:  MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAG

Query:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL
        G  G+VSVSFDV TLYIPPLTTQTTKFLGLPLPPFLKIDI+PE FHGNINQESGK+ELEFKAKFLFS+G+VYKAPPLLV+TVLTSEESKGSIR+GKGERL
Subjt:  GNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERL

Query:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS
        DEKGKC LVGVA V+PIDDLLLNSFLSLPTECIA LNAIITFS
Subjt:  DEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G62140.1 unknown protein1.1e-6156.68Show/hide
Query:  KLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQ---TQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSA-QID-
        K+NSL T I + + + R  +  K           SQNQ I  IS    P+   TQ+P + +S V FK++   KLGISRYPDFEY+  GG+G G+A +ID 
Subjt:  KLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQ---TQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSA-QID-

Query:  -AGGNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSI-GSVYKAPPLLVQTVLTSEESKGSIRNGK
            +  ++SV F+V TLYIP LT+QTTKFLG PLPPFLKIDI PE F G INQESGKVELEF AKF F+  G +Y+AP L+V+TVLT+EES G  + GK
Subjt:  -AGGNGGQVSVSFDVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSI-GSVYKAPPLLVQTVLTSEESKGSIRNGK

Query:  GERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS
        GERLDE+GKC LVGVA VE IDDL +N+FLSLP EC+A+L AII+ S
Subjt:  GERLDEKGKCSLVGVATVEPIDDLLLNSFLSLPTECIANLNAIITFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGTAAGCTAAACTCCCTCAATACTCCAATTCTCTTCAAATTTCCCACAAAAAGAGCAAAACTTGCAGGAAAATCCATCACTTTTTGTCCCACTTTCTCCATCAA
CAGTCAAAACCAAGAAATACCCACCATTTCCACCATCAAAACCCCTCAAACCCAGATCCCAAAATCTGATTTTTCCACCGTCCATTTCAAGTCTCTCACAGCCTGTAAGC
TTGGCATCTCCAGATACCCTGATTTTGAATACAACGCCCAAGGAGGAACAGGAACTGGGTCTGCTCAGATCGACGCCGGCGGCAACGGAGGCCAAGTTTCAGTTTCTTTC
GATGTTGACACACTCTATATCCCGCCATTGACAACTCAAACCACCAAGTTTCTTGGTCTGCCATTGCCACCGTTTCTGAAGATCGACATCCTCCCTGAATTCTTCCACGG
CAATATCAATCAAGAATCCGGCAAGGTTGAGCTAGAATTCAAAGCAAAGTTCTTATTCTCAATTGGGAGTGTGTATAAAGCTCCTCCATTGCTGGTACAAACAGTGCTGA
CATCTGAGGAATCAAAAGGAAGCATAAGAAATGGAAAAGGGGAAAGATTAGATGAAAAAGGAAAGTGCAGCTTGGTGGGAGTGGCTACTGTTGAGCCCATTGATGATTTG
CTTCTCAACTCCTTCCTCTCTCTCCCCACTGAATGTATTGCAAACCTCAATGCCATCATCACATTCTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGTAAGCTAAACTCCCTCAATACTCCAATTCTCTTCAAATTTCCCACAAAAAGAGCAAAACTTGCAGGAAAATCCATCACTTTTTGTCCCACTTTCTCCATCAA
CAGTCAAAACCAAGAAATACCCACCATTTCCACCATCAAAACCCCTCAAACCCAGATCCCAAAATCTGATTTTTCCACCGTCCATTTCAAGTCTCTCACAGCCTGTAAGC
TTGGCATCTCCAGATACCCTGATTTTGAATACAACGCCCAAGGAGGAACAGGAACTGGGTCTGCTCAGATCGACGCCGGCGGCAACGGAGGCCAAGTTTCAGTTTCTTTC
GATGTTGACACACTCTATATCCCGCCATTGACAACTCAAACCACCAAGTTTCTTGGTCTGCCATTGCCACCGTTTCTGAAGATCGACATCCTCCCTGAATTCTTCCACGG
CAATATCAATCAAGAATCCGGCAAGGTTGAGCTAGAATTCAAAGCAAAGTTCTTATTCTCAATTGGGAGTGTGTATAAAGCTCCTCCATTGCTGGTACAAACAGTGCTGA
CATCTGAGGAATCAAAAGGAAGCATAAGAAATGGAAAAGGGGAAAGATTAGATGAAAAAGGAAAGTGCAGCTTGGTGGGAGTGGCTACTGTTGAGCCCATTGATGATTTG
CTTCTCAACTCCTTCCTCTCTCTCCCCACTGAATGTATTGCAAACCTCAATGCCATCATCACATTCTCTTAG
Protein sequenceShow/hide protein sequence
MGCKLNSLNTPILFKFPTKRAKLAGKSITFCPTFSINSQNQEIPTISTIKTPQTQIPKSDFSTVHFKSLTACKLGISRYPDFEYNAQGGTGTGSAQIDAGGNGGQVSVSF
DVDTLYIPPLTTQTTKFLGLPLPPFLKIDILPEFFHGNINQESGKVELEFKAKFLFSIGSVYKAPPLLVQTVLTSEESKGSIRNGKGERLDEKGKCSLVGVATVEPIDDL
LLNSFLSLPTECIANLNAIITFS