; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003013 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003013
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold12:37790078..37798319
RNA-Seq ExpressionSpg003013
SyntenySpg003013
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032751.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.5e-2830.67Show/hide
Query:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI
        SQEK   IE+++EGWT+V RRKK+K +  +KESR +R+  R   +Q  K KKK+R+ KLV E+ +DF      +TLA++FP  FL D Q E   +V C  
Subjt:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI

Query:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAKIV------------EDVKASDLEKGETSTSL--------------------------VKPK
        ++  +++ +P    E   S  DLS F++  LLSLPQE K +                 +  E   T+  L                          V  K
Subjt:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAKIV------------EDVKASDLEKGETSTSL--------------------------VKPK

Query:  VVKDEKCTGSAQS--------------------------IESAAALASRSQEETIEQVQTTKLEEAVIAINTTVNGHSTTIKNIETQLGQLVGVLSTMNK
        V  D      A+S                           E    L S + EE  +  +T   E++  + +TT +      K     + + V  LS   K
Subjt:  VVKDEKCTGSAQS--------------------------IESAAALASRSQEETIEQVQTTKLEEAVIAINTTVNGHSTTIKNIETQLGQLVGVLSTMNK

Query:  GKAPAEQE---------------------KTQMEYCKAITVHQEEVEEEPESEEYDTPTGEAEEDTSSDEAEKPEPEPPIPSPTLMKKLLKEGYSLPTTR
        GK+P  +                      K  M+  K I + + ++ +    + +D    +       D     E      S    KKLL+EG+++P +R
Subjt:  GKAPAEQE---------------------KTQMEYCKAITVHQEEVEEEPESEEYDTPTGEAEEDTSSDEAEKPEPEPPIPSPTLMKKLLKEGYSLPTTR

Query:  KGIGYRSPEPVGITRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQR
        KG+ Y+SPE + ITR+G  KV D+NHITV+EVD  +EKE   QRTS F RI P VARA VF R
Subjt:  KGIGYRSPEPVGITRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQR

KAA0038070.1 uncharacterized protein E6C27_scaffold36G002800 [Cucumis melo var. makuwa]4.6e-3031.81Show/hide
Query:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI
        SQ K  SIE+++E W +V RRKK+K +  +KES  + + +R  K+++ K KKK+R+ KLV E+ +DF  P   +TL ++FP   L D Q E LE+V CH 
Subjt:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI

Query:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAK------IVEDVKASDLEKGETSTSLVKPKVV--KDEKCTGSAQSIESAAALASRSQEETIE
        ++ +E++ + + S E      D S  ++ DLLSLPQE K      ++  V +S      T  SL     +   D+     ++       ++   +E+ ++
Subjt:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAK------IVEDVKASDLEKGETSTSLVKPKVV--KDEKCTGSAQSIESAAALASRSQEETIE

Query:  QVQTTKLEEAVIAINTTVNGHSTTIKNIETQLGQLVG-------VLSTMNKG-----------------KAPA-----EQEKTQMEYCKAITVHQEEVEE
        ++           +    +G +  +K+   QLG L+        V+ + N+G                 K+ A     +   T         +H   V  
Subjt:  QVQTTKLEEAVIAINTTVNGHSTTIKNIETQLGQLVG-------VLSTMNKG-----------------KAPA-----EQEKTQMEYCKAITVHQEEVEE

Query:  EPESE---EYDTPTGEAEEDTSSDEAEKPEPEPPIPSPTLMKKLLKEGYSLPTTRKGIGYRSPEPVGITRRGKAKVADTNHITVEEVDDSKEKESVDQRT
            +    Y     + E D++  ++ K   +P + S  + KKLL EG+++P +RKG+GY+SPEP+ ITR+ K KV D+NHIT+EEVD  ++KE   QRT
Subjt:  EPESE---EYDTPTGEAEEDTSSDEAEKPEPEPPIPSPTLMKKLLKEGYSLPTTRKGIGYRSPEPVGITRRGKAKVADTNHITVEEVDDSKEKESVDQRT

Query:  SVFRRIRPPVARALV
        S F RI P VARALV
Subjt:  SVFRRIRPPVARALV

KAA0039557.1 uncharacterized protein E6C27_scaffold744G00270 [Cucumis melo var. makuwa]7.9e-3026.96Show/hide
Query:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI
        SQEK   IE+++EGWTIV RRKK+K +  +KE R +R+ ++  K+Q+ K KKK+R+ KL+ E+ +DF      +TLA++FP  FL D Q E   +V CH 
Subjt:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI

Query:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAKIV----------------------------EDVKASDLEKGET--STSLVKPKVVKDEKC-
        ++ +E++++P  S E      DLS F++ DLLSLPQE KI+                             D    DL  G    +  L     V++++  
Subjt:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAKIV----------------------------EDVKASDLEKGET--STSLVKPKVVKDEKC-

Query:  -----TGSAQSIESAAALASRSQEETIEQVQTTKL--------EEAVIAI------------------------------NTTVNGHSTT----------
              GSA +I   + +  R     +E++  +KL         + VI +                               + ++G+             
Subjt:  -----TGSAQSIESAAALASRSQEETIEQVQTTKL--------EEAVIAI------------------------------NTTVNGHSTT----------

Query:  ----IKNIETQLGQLVGVLSTMNKGKAPAEQEKTQMEYCKAITVHQEE--------VEEEPESEEYDTPTGEAEEDTSSDEAEKPEPEPPIPSP------
            +K +E        V S     K   + + +       + +   E          +EP+       +G++E  TS+ +  K    P + SP      
Subjt:  ----IKNIETQLGQLVGVLSTMNKGKAPAEQEKTQMEYCKAITVHQEE--------VEEEPESEEYDTPTGEAEEDTSSDEAEKPEPEPPIPSP------

Query:  ------------------------------------------------------------------------TLMKKLLKEGYSLPTTRKGIGYRSPEPV
                                                                                +  KKLL+EG+ +P +RKG+GY+SPEP+
Subjt:  ------------------------------------------------------------------------TLMKKLLKEGYSLPTTRKGIGYRSPEPV

Query:  GITRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVF
         ITR+GK KV D+NHITV+EVD  +E E   QRTS F RI P VAR  VF+RLS+ E E +  Q T++  R SVF
Subjt:  GITRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVF

KAA0061113.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.5e-2830.08Show/hide
Query:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVT---
        SQEK   IE+++EGWT+V RRKK+K +  +KESRL+ + +R  K+Q+ K KKK+R+ KLV EK +DF      +TLA++FP  FL D Q E   +V    
Subjt:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVT---

Query:  --------------CHIVDMVEDD-----------------------------------DVPASSSETVASLGDLSSFSIKDLLSLPQEAKIVEDVKASD
                      C  +D  ++D                                    +P S+   +  L +  S S   +    Q ++ V D K   
Subjt:  --------------CHIVDMVEDD-----------------------------------DVPASSSETVASLGDLSSFSIKDLLSLPQEAKIVEDVKASD

Query:  LEKGETSTSLVKPKVVKDE--------------KCTGSAQSIESAAALASRSQEETIEQVQTTKLEEAVIAINTTVNGHSTTIKNIETQLGQLVGVLSTM
           G      V+  +V  E              K TG+  S +S A+ ++      +++  +       + ++    G S     +E   G  VG +  +
Subjt:  LEKGETSTSLVKPKVVKDE--------------KCTGSAQSIESAAALASRSQEETIEQVQTTKLEEAVIAINTTVNGHSTTIKNIETQLGQLVGVLSTM

Query:  NKGKAPAEQEKTQMEY---CKAITVHQEEVEEEPESEEYDTPTGEAEEDTSSDEAE--KPEPEPPIPSPTLMKKLLKEGYSLPTTRKGIGYRSPEPVGIT
         +       + T+ E        ++ Q   ++  + + Y +      + T+  E +  K   +P + S    KKLL+EG+++P +RKG+GY+ PEP+ IT
Subjt:  NKGKAPAEQEKTQMEY---CKAITVHQEEVEEEPESEEYDTPTGEAEEDTSSDEAE--KPEPEPPIPSPTLMKKLLKEGYSLPTTRKGIGYRSPEPVGIT

Query:  RRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVF
        R+GK KV D+NHITV+EVD  +EKE   QRTS F R+ P VARA VF+RLS+ E E +  Q T+S  R S F
Subjt:  RRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVF

TYK05005.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.7e-3029.02Show/hide
Query:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI
        SQEK   IE+++E WTIV RRKK+K +  +KE R +R+ +R  K+Q+ K KKK+R+ KL+ ++ +DF      ITLA++FP  FL D Q E   +V CH 
Subjt:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI

Query:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAKIV----------------------------EDVKASDLEKGET--STSLVKPKVVKDEKC-
        ++  E++ +P  S E      DLS F++ DLLSLPQE K +                             D    DL  G    +  L     V++++  
Subjt:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAKIV----------------------------EDVKASDLEKGET--STSLVKPKVVKDEKC-

Query:  -----TGSAQSIESAAALA-------------------SRSQEETIEQVQTTKLEEAVIAINTT---------VNGHSTTIKNIET---------QLGQL
              GSA +I   + +                    ++  +  I+ V+  + +    +   +          N  S  + ++E          QL  L
Subjt:  -----TGSAQSIESAAALA-------------------SRSQEETIEQVQTTKLEEAVIAINTT---------VNGHSTTIKNIET---------QLGQL

Query:  VGVLSTMNKGKAPAEQEKTQMEYCKAITVHQEEVE---------------------EEPE----------SEEYDTP-TGEAEEDTSSDEAEKPEP----
              ++ G   +E+ +      K++ +  E+                       E P+           E + TP T   +++   D  E   P    
Subjt:  VGVLSTMNKGKAPAEQEKTQMEYCKAITVHQEEVE---------------------EEPE----------SEEYDTP-TGEAEEDTSSDEAEKPEP----

Query:  -------------------------------EPPIPSPTLMKKLLKEGYSLPTTRKGIGYRSPEPVGITRRGKAKVADTNHITVEEVDDSKEKESVDQRT
                                       E P  S T  KKLL+EG+++P +RKG+GY+ PEP+ ITR+GK K+ D+NHITV+EVD  KEKE   QRT
Subjt:  -------------------------------EPPIPSPTLMKKLLKEGYSLPTTRKGIGYRSPEPVGITRRGKAKVADTNHITVEEVDDSKEKESVDQRT

Query:  SVFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVF
        S F RI P VARA VF+RLSV E E +  Q T++  R S F
Subjt:  SVFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVF

TrEMBL top hitse value%identityAlignment
A0A5A7T3Z3 Uncharacterized protein2.2e-3031.81Show/hide
Query:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI
        SQ K  SIE+++E W +V RRKK+K +  +KES  + + +R  K+++ K KKK+R+ KLV E+ +DF  P   +TL ++FP   L D Q E LE+V CH 
Subjt:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI

Query:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAK------IVEDVKASDLEKGETSTSLVKPKVV--KDEKCTGSAQSIESAAALASRSQEETIE
        ++ +E++ + + S E      D S  ++ DLLSLPQE K      ++  V +S      T  SL     +   D+     ++       ++   +E+ ++
Subjt:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAK------IVEDVKASDLEKGETSTSLVKPKVV--KDEKCTGSAQSIESAAALASRSQEETIE

Query:  QVQTTKLEEAVIAINTTVNGHSTTIKNIETQLGQLVG-------VLSTMNKG-----------------KAPA-----EQEKTQMEYCKAITVHQEEVEE
        ++           +    +G +  +K+   QLG L+        V+ + N+G                 K+ A     +   T         +H   V  
Subjt:  QVQTTKLEEAVIAINTTVNGHSTTIKNIETQLGQLVG-------VLSTMNKG-----------------KAPA-----EQEKTQMEYCKAITVHQEEVEE

Query:  EPESE---EYDTPTGEAEEDTSSDEAEKPEPEPPIPSPTLMKKLLKEGYSLPTTRKGIGYRSPEPVGITRRGKAKVADTNHITVEEVDDSKEKESVDQRT
            +    Y     + E D++  ++ K   +P + S  + KKLL EG+++P +RKG+GY+SPEP+ ITR+ K KV D+NHIT+EEVD  ++KE   QRT
Subjt:  EPESE---EYDTPTGEAEEDTSSDEAEKPEPEPPIPSPTLMKKLLKEGYSLPTTRKGIGYRSPEPVGITRRGKAKVADTNHITVEEVDDSKEKESVDQRT

Query:  SVFRRIRPPVARALV
        S F RI P VARALV
Subjt:  SVFRRIRPPVARALV

A0A5D3BG93 Ty3-gypsy retrotransposon protein1.2e-2830.67Show/hide
Query:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI
        SQEK   IE+++EGWT+V RRKK+K +  +KESR +R+  R   +Q  K KKK+R+ KLV E+ +DF      +TLA++FP  FL D Q E   +V C  
Subjt:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI

Query:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAKIV------------EDVKASDLEKGETSTSL--------------------------VKPK
        ++  +++ +P    E   S  DLS F++  LLSLPQE K +                 +  E   T+  L                          V  K
Subjt:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAKIV------------EDVKASDLEKGETSTSL--------------------------VKPK

Query:  VVKDEKCTGSAQS--------------------------IESAAALASRSQEETIEQVQTTKLEEAVIAINTTVNGHSTTIKNIETQLGQLVGVLSTMNK
        V  D      A+S                           E    L S + EE  +  +T   E++  + +TT +      K     + + V  LS   K
Subjt:  VVKDEKCTGSAQS--------------------------IESAAALASRSQEETIEQVQTTKLEEAVIAINTTVNGHSTTIKNIETQLGQLVGVLSTMNK

Query:  GKAPAEQE---------------------KTQMEYCKAITVHQEEVEEEPESEEYDTPTGEAEEDTSSDEAEKPEPEPPIPSPTLMKKLLKEGYSLPTTR
        GK+P  +                      K  M+  K I + + ++ +    + +D    +       D     E      S    KKLL+EG+++P +R
Subjt:  GKAPAEQE---------------------KTQMEYCKAITVHQEEVEEEPESEEYDTPTGEAEEDTSSDEAEKPEPEPPIPSPTLMKKLLKEGYSLPTTR

Query:  KGIGYRSPEPVGITRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQR
        KG+ Y+SPE + ITR+G  KV D+NHITV+EVD  +EKE   QRTS F RI P VARA VF R
Subjt:  KGIGYRSPEPVGITRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQR

A0A5D3BSG5 Uncharacterized protein3.8e-3026.96Show/hide
Query:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI
        SQEK   IE+++EGWTIV RRKK+K +  +KE R +R+ ++  K+Q+ K KKK+R+ KL+ E+ +DF      +TLA++FP  FL D Q E   +V CH 
Subjt:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI

Query:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAKIV----------------------------EDVKASDLEKGET--STSLVKPKVVKDEKC-
        ++ +E++++P  S E      DLS F++ DLLSLPQE KI+                             D    DL  G    +  L     V++++  
Subjt:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAKIV----------------------------EDVKASDLEKGET--STSLVKPKVVKDEKC-

Query:  -----TGSAQSIESAAALASRSQEETIEQVQTTKL--------EEAVIAI------------------------------NTTVNGHSTT----------
              GSA +I   + +  R     +E++  +KL         + VI +                               + ++G+             
Subjt:  -----TGSAQSIESAAALASRSQEETIEQVQTTKL--------EEAVIAI------------------------------NTTVNGHSTT----------

Query:  ----IKNIETQLGQLVGVLSTMNKGKAPAEQEKTQMEYCKAITVHQEE--------VEEEPESEEYDTPTGEAEEDTSSDEAEKPEPEPPIPSP------
            +K +E        V S     K   + + +       + +   E          +EP+       +G++E  TS+ +  K    P + SP      
Subjt:  ----IKNIETQLGQLVGVLSTMNKGKAPAEQEKTQMEYCKAITVHQEE--------VEEEPESEEYDTPTGEAEEDTSSDEAEKPEPEPPIPSP------

Query:  ------------------------------------------------------------------------TLMKKLLKEGYSLPTTRKGIGYRSPEPV
                                                                                +  KKLL+EG+ +P +RKG+GY+SPEP+
Subjt:  ------------------------------------------------------------------------TLMKKLLKEGYSLPTTRKGIGYRSPEPV

Query:  GITRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVF
         ITR+GK KV D+NHITV+EVD  +E E   QRTS F RI P VAR  VF+RLS+ E E +  Q T++  R SVF
Subjt:  GITRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVF

A0A5D3BY54 Ty3-gypsy retrotransposon protein7.2e-2930.08Show/hide
Query:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVT---
        SQEK   IE+++EGWT+V RRKK+K +  +KESRL+ + +R  K+Q+ K KKK+R+ KLV EK +DF      +TLA++FP  FL D Q E   +V    
Subjt:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVT---

Query:  --------------CHIVDMVEDD-----------------------------------DVPASSSETVASLGDLSSFSIKDLLSLPQEAKIVEDVKASD
                      C  +D  ++D                                    +P S+   +  L +  S S   +    Q ++ V D K   
Subjt:  --------------CHIVDMVEDD-----------------------------------DVPASSSETVASLGDLSSFSIKDLLSLPQEAKIVEDVKASD

Query:  LEKGETSTSLVKPKVVKDE--------------KCTGSAQSIESAAALASRSQEETIEQVQTTKLEEAVIAINTTVNGHSTTIKNIETQLGQLVGVLSTM
           G      V+  +V  E              K TG+  S +S A+ ++      +++  +       + ++    G S     +E   G  VG +  +
Subjt:  LEKGETSTSLVKPKVVKDE--------------KCTGSAQSIESAAALASRSQEETIEQVQTTKLEEAVIAINTTVNGHSTTIKNIETQLGQLVGVLSTM

Query:  NKGKAPAEQEKTQMEY---CKAITVHQEEVEEEPESEEYDTPTGEAEEDTSSDEAE--KPEPEPPIPSPTLMKKLLKEGYSLPTTRKGIGYRSPEPVGIT
         +       + T+ E        ++ Q   ++  + + Y +      + T+  E +  K   +P + S    KKLL+EG+++P +RKG+GY+ PEP+ IT
Subjt:  NKGKAPAEQEKTQMEY---CKAITVHQEEVEEEPESEEYDTPTGEAEEDTSSDEAE--KPEPEPPIPSPTLMKKLLKEGYSLPTTRKGIGYRSPEPVGIT

Query:  RRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVF
        R+GK KV D+NHITV+EVD  +EKE   QRTS F R+ P VARA VF+RLS+ E E +  Q T+S  R S F
Subjt:  RRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVF

A0A5D3C0W6 Ty3-gypsy retrotransposon protein1.3e-3029.02Show/hide
Query:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI
        SQEK   IE+++E WTIV RRKK+K +  +KE R +R+ +R  K+Q+ K KKK+R+ KL+ ++ +DF      ITLA++FP  FL D Q E   +V CH 
Subjt:  SQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHI

Query:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAKIV----------------------------EDVKASDLEKGET--STSLVKPKVVKDEKC-
        ++  E++ +P  S E      DLS F++ DLLSLPQE K +                             D    DL  G    +  L     V++++  
Subjt:  VDMVEDDDVPASSSETVASLGDLSSFSIKDLLSLPQEAKIV----------------------------EDVKASDLEKGET--STSLVKPKVVKDEKC-

Query:  -----TGSAQSIESAAALA-------------------SRSQEETIEQVQTTKLEEAVIAINTT---------VNGHSTTIKNIET---------QLGQL
              GSA +I   + +                    ++  +  I+ V+  + +    +   +          N  S  + ++E          QL  L
Subjt:  -----TGSAQSIESAAALA-------------------SRSQEETIEQVQTTKLEEAVIAINTT---------VNGHSTTIKNIET---------QLGQL

Query:  VGVLSTMNKGKAPAEQEKTQMEYCKAITVHQEEVE---------------------EEPE----------SEEYDTP-TGEAEEDTSSDEAEKPEP----
              ++ G   +E+ +      K++ +  E+                       E P+           E + TP T   +++   D  E   P    
Subjt:  VGVLSTMNKGKAPAEQEKTQMEYCKAITVHQEEVE---------------------EEPE----------SEEYDTP-TGEAEEDTSSDEAEKPEP----

Query:  -------------------------------EPPIPSPTLMKKLLKEGYSLPTTRKGIGYRSPEPVGITRRGKAKVADTNHITVEEVDDSKEKESVDQRT
                                       E P  S T  KKLL+EG+++P +RKG+GY+ PEP+ ITR+GK K+ D+NHITV+EVD  KEKE   QRT
Subjt:  -------------------------------EPPIPSPTLMKKLLKEGYSLPTTRKGIGYRSPEPVGITRRGKAKVADTNHITVEEVDDSKEKESVDQRT

Query:  SVFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVF
        S F RI P VARA VF+RLSV E E +  Q T++  R S F
Subjt:  SVFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGGTCCCAAGAAAAATATAATTCCATTGAAGATGAGAACGAAGGCTGGACCATTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCTCG
CCTATTTCGAGATAGTAAAAGAAATGTTAAGTCTCAAAGGAAGAAGGGAAAAAAAAAGTCGAGGAGGTCAAAGCTTGTCGTGGAGAAAAGTGAAGATTTCTTTTGCCCTC
CACCACCCATAACATTGGCAGAATACTTCCCAAGGGGCTTTCTCGATGATAGTCAAGGAGAAGCACTTGAAATCGTCACGTGTCACATTGTGGACATGGTGGAAGATGAT
GATGTCCCTGCTAGTTCCTCGGAAACGGTGGCAAGTCTAGGAGACTTATCCTCCTTCAGCATAAAGGACTTATTGTCACTTCCTCAGGAAGCTAAAATTGTTGAGGATGT
GAAGGCGTCTGACCTGGAAAAGGGTGAAACATCTACAAGCCTTGTGAAGCCTAAGGTTGTAAAGGATGAAAAATGTACAGGGAGTGCACAGTCAATTGAATCAGCTGCTG
CTTTAGCATCTAGATCTCAGGAGGAGACCATCGAGCAGGTTCAGACAACCAAATTAGAGGAAGCGGTCATTGCCATCAACACCACAGTGAATGGCCACAGTACAACCATC
AAGAACATTGAGACTCAGTTGGGACAGTTGGTAGGTGTTTTGAGCACCATGAATAAAGGTAAGGCCCCAGCTGAGCAAGAGAAAACCCAGATGGAGTACTGTAAGGCAAT
CACTGTGCACCAGGAGGAAGTTGAAGAGGAGCCTGAGTCTGAGGAGTATGACACGCCTACAGGGGAAGCTGAGGAGGACACATCATCAGATGAGGCTGAAAAGCCTGAAC
CTGAGCCTCCTATTCCTTCTCCCACACTGATGAAGAAACTTCTAAAGGAAGGTTATAGTCTGCCTACAACAAGAAAAGGGATTGGATATAGGTCGCCAGAGCCGGTTGGC
ATAACAAGAAGAGGGAAGGCAAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTGGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTGTTTTTAG
GCGCATCAGGCCACCGGTTGCTCGTGCTTTAGTCTTTCAGAGATTAAGTGTCAATGAAACAGAAGAAGAGAGCACACAACCTACCAATAGCTCCACTCGACCTTCAGTTT
TTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGGTCCCAAGAAAAATATAATTCCATTGAAGATGAGAACGAAGGCTGGACCATTGTCGTTCGTCGCAAAAAGCAAAAGCAAAGTTACGCACGGAAAGAGTCTCG
CCTATTTCGAGATAGTAAAAGAAATGTTAAGTCTCAAAGGAAGAAGGGAAAAAAAAAGTCGAGGAGGTCAAAGCTTGTCGTGGAGAAAAGTGAAGATTTCTTTTGCCCTC
CACCACCCATAACATTGGCAGAATACTTCCCAAGGGGCTTTCTCGATGATAGTCAAGGAGAAGCACTTGAAATCGTCACGTGTCACATTGTGGACATGGTGGAAGATGAT
GATGTCCCTGCTAGTTCCTCGGAAACGGTGGCAAGTCTAGGAGACTTATCCTCCTTCAGCATAAAGGACTTATTGTCACTTCCTCAGGAAGCTAAAATTGTTGAGGATGT
GAAGGCGTCTGACCTGGAAAAGGGTGAAACATCTACAAGCCTTGTGAAGCCTAAGGTTGTAAAGGATGAAAAATGTACAGGGAGTGCACAGTCAATTGAATCAGCTGCTG
CTTTAGCATCTAGATCTCAGGAGGAGACCATCGAGCAGGTTCAGACAACCAAATTAGAGGAAGCGGTCATTGCCATCAACACCACAGTGAATGGCCACAGTACAACCATC
AAGAACATTGAGACTCAGTTGGGACAGTTGGTAGGTGTTTTGAGCACCATGAATAAAGGTAAGGCCCCAGCTGAGCAAGAGAAAACCCAGATGGAGTACTGTAAGGCAAT
CACTGTGCACCAGGAGGAAGTTGAAGAGGAGCCTGAGTCTGAGGAGTATGACACGCCTACAGGGGAAGCTGAGGAGGACACATCATCAGATGAGGCTGAAAAGCCTGAAC
CTGAGCCTCCTATTCCTTCTCCCACACTGATGAAGAAACTTCTAAAGGAAGGTTATAGTCTGCCTACAACAAGAAAAGGGATTGGATATAGGTCGCCAGAGCCGGTTGGC
ATAACAAGAAGAGGGAAGGCAAAAGTGGCAGACACAAATCATATAACAGTAGAGGAGGTGGATGACTCAAAAGAAAAAGAGAGTGTCGACCAACGAACTTCTGTTTTTAG
GCGCATCAGGCCACCGGTTGCTCGTGCTTTAGTCTTTCAGAGATTAAGTGTCAATGAAACAGAAGAAGAGAGCACACAACCTACCAATAGCTCCACTCGACCTTCAGTTT
TTTGA
Protein sequenceShow/hide protein sequence
MKGSQEKYNSIEDENEGWTIVVRRKKQKQSYARKESRLFRDSKRNVKSQRKKGKKKSRRSKLVVEKSEDFFCPPPPITLAEYFPRGFLDDSQGEALEIVTCHIVDMVEDD
DVPASSSETVASLGDLSSFSIKDLLSLPQEAKIVEDVKASDLEKGETSTSLVKPKVVKDEKCTGSAQSIESAAALASRSQEETIEQVQTTKLEEAVIAINTTVNGHSTTI
KNIETQLGQLVGVLSTMNKGKAPAEQEKTQMEYCKAITVHQEEVEEEPESEEYDTPTGEAEEDTSSDEAEKPEPEPPIPSPTLMKKLLKEGYSLPTTRKGIGYRSPEPVG
ITRRGKAKVADTNHITVEEVDDSKEKESVDQRTSVFRRIRPPVARALVFQRLSVNETEEESTQPTNSSTRPSVF