; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003027 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003027
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold12:37380171..37385320
RNA-Seq ExpressionSpg003027
SyntenySpg003027
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.9e-1645.87Show/hide
Query:  GRRKTAQFNRK-DKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEAL
        G+R   +  R  DK Q +    R R  + D  +KFE+YT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHGH+T++C  LK+E+E L
Subjt:  GRRKTAQFNRK-DKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEAL

Query:  IQNGYLKEF
        I  GYLKE+
Subjt:  IQNGYLKEF

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.1e-1847.71Show/hide
Query:  GRRKTAQFNRK-DKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEAL
        G+R   +  R  DK Q +    R R  + D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T++C  LK+E+E L
Subjt:  GRRKTAQFNRK-DKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEAL

Query:  IQNGYLKEF
        I+ GYLKE+
Subjt:  IQNGYLKEF

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]6.9e-1839.1Show/hide
Query:  AEAEAKKDNLPWKIELLNALKELGNPQGDLQNRTGRRKTAQFNRKDKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSN
        AEA ++        E  +  KEL   + D Q R    +    ++ +K+ R        + + D  +KFE+YTPT++P EQ+LMEI++  LL  P  +K+ 
Subjt:  AEAEAKKDNLPWKIELLNALKELGNPQGDLQNRTGRRKTAQFNRKDKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSN

Query:  PDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFT--TKASTLRAHAN
        P+ R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+    KA+  R + N
Subjt:  PDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFT--TKASTLRAHAN

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]8.5e-1644.95Show/hide
Query:  GRRKTAQFNRK-DKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEAL
        G+R   +  R  DK Q +    R R  + D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T++   LK+E+E L
Subjt:  GRRKTAQFNRK-DKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEAL

Query:  IQNGYLKEF
        I+ GYL+E+
Subjt:  IQNGYLKEF

XP_024042801.1 uncharacterized protein LOC112099618 [Citrus clementina]2.0e-1742.75Show/hide
Query:  ELLNALKELGNPQGDLQNRTGRRKTAQFNRKDKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR
        EL NA K   N          + K  Q   K+K  R +  G   L       +F RYTP ++P+EQ+LM+IRN +LL  P+ +K  P+ RD+S+YC +HR
Subjt:  ELLNALKELGNPQGDLQNRTGRRKTAQFNRKDKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHR

Query:  DHGHSTRNCIQLKDEIEALIQNGYLKEFTTK
        DH H+  +C  LK+EI++LIQ GYLKEF  K
Subjt:  DHGHSTRNCIQLKDEIEALIQNGYLKEFTTK

TrEMBL top hitse value%identityAlignment
A0A2N9GXI9 Ribonuclease H2.0e-1542.86Show/hide
Query:  RKTAQFNRKDKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQN
        R  AQ NR  +++  D  GRG      + ++F R+TP + P + I M+IRN   L  P KL ++PD R + +YC FHRDHGH+T NC  LK +IE LI+ 
Subjt:  RKTAQFNRKDKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQN

Query:  GYLKEFTTKASTLRAHANA
        G L+ F  K  T R+   A
Subjt:  GYLKEFTTKASTLRAHANA

A0A6J1CNT2 uncharacterized protein LOC1110128051.4e-1645.87Show/hide
Query:  GRRKTAQFNRK-DKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEAL
        G+R   +  R  DK Q +    R R  + D  +KFE+YT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHGH+T++C  LK+E+E L
Subjt:  GRRKTAQFNRK-DKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEAL

Query:  IQNGYLKEF
        I  GYLKE+
Subjt:  IQNGYLKEF

A0A6J1DWY0 uncharacterized protein LOC1110252935.2e-1947.71Show/hide
Query:  GRRKTAQFNRK-DKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEAL
        G+R   +  R  DK Q +    R R  + D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T++C  LK+E+E L
Subjt:  GRRKTAQFNRK-DKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEAL

Query:  IQNGYLKEF
        I+ GYLKE+
Subjt:  IQNGYLKEF

A0A6J1DYL6 uncharacterized protein LOC1110257854.1e-1644.95Show/hide
Query:  GRRKTAQFNRK-DKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEAL
        G+R   +  R  DK Q +    R R  + D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T++   LK+E+E L
Subjt:  GRRKTAQFNRK-DKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEAL

Query:  IQNGYLKEF
        I+ GYL+E+
Subjt:  IQNGYLKEF

A0A6J1DZ52 uncharacterized protein LOC1110256123.4e-1839.1Show/hide
Query:  AEAEAKKDNLPWKIELLNALKELGNPQGDLQNRTGRRKTAQFNRKDKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSN
        AEA ++        E  +  KEL   + D Q R    +    ++ +K+ R        + + D  +KFE+YTPT++P EQ+LMEI++  LL  P  +K+ 
Subjt:  AEAEAKKDNLPWKIELLNALKELGNPQGDLQNRTGRRKTAQFNRKDKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSN

Query:  PDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFT--TKASTLRAHAN
        P+ R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+    KA+  R + N
Subjt:  PDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFT--TKASTLRAHAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTAGCCGCCCCGGTTTCGCCTAGTTTGTCCCGAAACACCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCG
GTGTGCAGTTGGCGGCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGAAGAAGATAAATCAAGACATAAACACAGAAAATT
CGGATGGCGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACCGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCT
GATCTAAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCATTAAAACCCCTGATGA
GAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGATCAGGG
GGCTCAAGCCTACTGATCGTACAGTTTTGAGGAGTCCAGAGTCAAGCACATTTAGGGGACGTGACTACACAGTTTCTACCCCAAGCTATTGTCATACTAAGACAGACCTG
AGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCAGAGGCCAAGAAAGACAATCT
CCCCTGGAAGATCGAGCTTCTGAACGCACTGAAGGAGCTCGGAAATCCTCAGGGAGACCTGCAGAACCGGACTGGAAGACGAAAGACTGCTCAATTCAATAGGAAGGACA
AAAAGCAGCGGACCGACGACCATGGCCGAGGCCGACTAGACCGAGGCGACTACTTGAAGAAGTTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAAATCTTGATG
GAGATAAGGAATACAAACCTGCTAAATGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGCCAGTATTGTCTCTTTCATCGAGATCATGGACATTCAAC
CAGGAACTGCATTCAGCTAAAGGACGAAATTGAAGCGCTGATTCAGAACGGATACCTGAAGGAGTTCACCACTAAGGCTTCCACGCTTAGAGCCCACGCTAATGCACCCG
AGCCTGGACTACCAAGTCTACCTCACCTCAGAGCTCAAACACTTGCTCAAGCACTTCATCTCTCCCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACC
ACACCGGTGTGCAGGTTTACTATTTCGCAGGCCACGTCTTCCCCTTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGCTACCGGACTCCAATTGGTCCCCGGG
CCTTTGGCCATGGTCGGCCTCGGCAATGGGCCGAGGCCGACCTCACCCTCGGCCTCTCCCTTGGGCCGAGGCCGAGGGTTATGTATTTGGGCCGGAAGGAGCTCCGGTCC
TTTGTTTCGTCGGCTTGGCTTCTGTCGTCTCTGGGCCCGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTAGCCGCCCCGGTTTCGCCTAGTTTGTCCCGAAACACCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGCATCGGAGGCGGTGTGGCTAGCACCACACCG
GTGTGCAGTTGGCGGCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGAAGAAGATAAATCAAGACATAAACACAGAAAATT
CGGATGGCGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGGACCGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAGCT
GATCTAAAATTTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCATTAAAACCCCTGATGA
GAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGATCAGGG
GGCTCAAGCCTACTGATCGTACAGTTTTGAGGAGTCCAGAGTCAAGCACATTTAGGGGACGTGACTACACAGTTTCTACCCCAAGCTATTGTCATACTAAGACAGACCTG
AGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCCGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCAGAGGCCAAGAAAGACAATCT
CCCCTGGAAGATCGAGCTTCTGAACGCACTGAAGGAGCTCGGAAATCCTCAGGGAGACCTGCAGAACCGGACTGGAAGACGAAAGACTGCTCAATTCAATAGGAAGGACA
AAAAGCAGCGGACCGACGACCATGGCCGAGGCCGACTAGACCGAGGCGACTACTTGAAGAAGTTTGAAAGGTACACCCCTACTTCAATCCCACAGGAGCAAATCTTGATG
GAGATAAGGAATACAAACCTGCTAAATGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGCCAGTATTGTCTCTTTCATCGAGATCATGGACATTCAAC
CAGGAACTGCATTCAGCTAAAGGACGAAATTGAAGCGCTGATTCAGAACGGATACCTGAAGGAGTTCACCACTAAGGCTTCCACGCTTAGAGCCCACGCTAATGCACCCG
AGCCTGGACTACCAAGTCTACCTCACCTCAGAGCTCAAACACTTGCTCAAGCACTTCATCTCTCCCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAGCACC
ACACCGGTGTGCAGGTTTACTATTTCGCAGGCCACGTCTTCCCCTTCATCTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGCTACCGGACTCCAATTGGTCCCCGGG
CCTTTGGCCATGGTCGGCCTCGGCAATGGGCCGAGGCCGACCTCACCCTCGGCCTCTCCCTTGGGCCGAGGCCGAGGGTTATGTATTTGGGCCGGAAGGAGCTCCGGTCC
TTTGTTTCGTCGGCTTGGCTTCTGTCGTCTCTGGGCCCGACTAA
Protein sequenceShow/hide protein sequence
MLLAAPVSPSLSRNTSEFLKTLGARAASEAVWLAPHRCAVGGVCGEESLPNLHIGHSMSKGMKKINQDINTENSDGDRHQRRSREEGRDRPRTESPRPRSPLPSSREKQA
DLKFAALENKVSAMDHNLSRILRILDKPGPSIKTPDERLVRDPRKGKEPMEHTAESETRSKGKKTSSMTSKIRGLKPTDRTVLRSPESSTFRGRDYTVSTPSYCHTKTDL
RNLIEEKRRSAKTAESEARAAEAEARAAEAEAKKDNLPWKIELLNALKELGNPQGDLQNRTGRRKTAQFNRKDKKQRTDDHGRGRLDRGDYLKKFERYTPTSIPQEQILM
EIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFTTKASTLRAHANAPEPGLPSLPHLRAQTLAQALHLSLPFSDLSIGGGVAST
TPVCRFTISQATSSPSSTNLPLVAREGQLPDSNWSPGLWPWSASAMGRGRPHPRPLPWAEAEGYVFGPEGAPVLCFVGLASVVSGPD