; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003062 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003062
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationscaffold12:38282277..38285797
RNA-Seq ExpressionSpg003062
SyntenySpg003062
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147568.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis sativus]6.6e-11074.04Show/hide
Query:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MAV+S PCLQPQIKVSQP LS ATKV++GLK QS+SPFGG KPN+TAEFYGKVHKSLQ+R++NKKAARAQFQMMPIGTPRVPY+TPGEG WQWVDLWNAL
Subjt:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
          E+            S  ++   L L S+ + K L          LTP++A+YDTMQSLKSP+ATHC+G AYN+AAFLLAAGEKGNR AMPLSRIALQS
Subjt:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        PAG+ARG+ADDIQNEAN+LL+IRDYLFDELSKKTGQPVEKI+KDLS  KRFNAQ+AL+YGLIDRI RP RIKADAPRKD GTGLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

XP_008437161.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis melo]1.7e-11879.3Show/hide
Query:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MAVSSTPC QPQIKVSQP LSF TKV+SGLK QS+SPFGGVKPN+TAEFYGKVHKSLQ+R+HNKKAARAQFQMMPIGTPRVPYR PGEGTWQWVDLWNAL
Subjt:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  VSEK------------SKYVILCNLVLSL--HSRKMLL-------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
          E+            S  ++   L L     SRK  +        LTP+MA+YDTMQSL SPVATHCVGYAYN+AAFLLAAGEKGNRFAMPLSRIALQS
Subjt:  VSEK------------SKYVILCNLVLSL--HSRKMLL-------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        PAG+ARGQADDIQNEANELLRIRDYLF+ELSKKTGQPVEKI+KDLSR+K FNAQEALDYGLIDRI RPPRIKADAPRKDAGTGLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

XP_022158384.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Momordica charantia]4.7e-12483.16Show/hide
Query:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MAVSS+PCLQPQIKVSQPPLSFATK++SGLKLQS+ PFGG KPNLT EFYGKVHKSL SR+HNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
Subjt:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
          E+            S  ++   L L S+ + K L          LTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
Subjt:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

XP_022957748.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucurbita moschata]5.1e-11075.79Show/hide
Query:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MA SSTPC QPQI  SQ PLS ATKV+SGLKLQS+SPFGG KPNLTAEFYGKVHKSLQS ++NKKA+R QFQMMPIGTPRVPYR PGEGTWQWVDLWNAL
Subjt:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
          E+            S  ++   L L S+ S K L          LTPS+AIYDTMQSLKS V THCVGYAY+LAAFLLAAGEKG+R AMPLSRIALQS
Subjt:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        P GAARGQADD++NEANELLRIRDYLF+ELSKKTGQPVE+INKDLSRMKRFNAQ AL+YGLIDRIVRP RIKADAPRKD G GLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

XP_038906920.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Benincasa hispida]3.4e-12282.46Show/hide
Query:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MAVSSTPCLQPQIKVSQPPLSF TKV+SGLK QS+SPFGG KPNLTAEFYGKVHKSLQ+R+ NKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
Subjt:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
          E+            S  ++   L L S+ + K L          LTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNR AMPLSRIALQS
Subjt:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        PAGAARGQADDIQNEANELLRIRDYL+DELSKKTGQPVEKIN+DLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

TrEMBL top hitse value%identityAlignment
A0A0A0KKQ7 ATP-dependent Clp protease proteolytic subunit3.2e-11074.04Show/hide
Query:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MAV+S PCLQPQIKVSQP LS ATKV++GLK QS+SPFGG KPN+TAEFYGKVHKSLQ+R++NKKAARAQFQMMPIGTPRVPY+TPGEG WQWVDLWNAL
Subjt:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
          E+            S  ++   L L S+ + K L          LTP++A+YDTMQSLKSP+ATHC+G AYN+AAFLLAAGEKGNR AMPLSRIALQS
Subjt:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        PAG+ARG+ADDIQNEAN+LL+IRDYLFDELSKKTGQPVEKI+KDLS  KRFNAQ+AL+YGLIDRI RP RIKADAPRKD GTGLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

A0A1S3ATH1 ATP-dependent Clp protease proteolytic subunit8.4e-11979.3Show/hide
Query:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MAVSSTPC QPQIKVSQP LSF TKV+SGLK QS+SPFGGVKPN+TAEFYGKVHKSLQ+R+HNKKAARAQFQMMPIGTPRVPYR PGEGTWQWVDLWNAL
Subjt:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  VSEK------------SKYVILCNLVLSL--HSRKMLL-------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
          E+            S  ++   L L     SRK  +        LTP+MA+YDTMQSL SPVATHCVGYAYN+AAFLLAAGEKGNRFAMPLSRIALQS
Subjt:  VSEK------------SKYVILCNLVLSL--HSRKMLL-------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        PAG+ARGQADDIQNEANELLRIRDYLF+ELSKKTGQPVEKI+KDLSR+K FNAQEALDYGLIDRI RPPRIKADAPRKDAGTGLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

A0A6J1DZ88 ATP-dependent Clp protease proteolytic subunit2.3e-12483.16Show/hide
Query:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MAVSS+PCLQPQIKVSQPPLSFATK++SGLKLQS+ PFGG KPNLT EFYGKVHKSL SR+HNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
Subjt:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
          E+            S  ++   L L S+ + K L          LTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
Subjt:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

A0A6J1H153 ATP-dependent Clp protease proteolytic subunit2.4e-11075.79Show/hide
Query:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MA SSTPC QPQI  SQ PLS ATKV+SGLKLQS+SPFGG KPNLTAEFYGKVHKSLQS ++NKKA+R QFQMMPIGTPRVPYR PGEGTWQWVDLWNAL
Subjt:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
          E+            S  ++   L L S+ S K L          LTPS+AIYDTMQSLKS V THCVGYAY+LAAFLLAAGEKG+R AMPLSRIALQS
Subjt:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        P GAARGQADD++NEANELLRIRDYLF+ELSKKTGQPVE+INKDLSRMKRFNAQ AL+YGLIDRIVRP RIKADAPRKD G GLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

A0A6J1JZK9 ATP-dependent Clp protease proteolytic subunit1.2e-10975.09Show/hide
Query:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL
        MA SSTPC QPQI  SQ P+S ATKV+SGLKLQS+SPFGG KPNLT EFYGKVHKSLQS ++NKKA+R QFQMMPIGTPRVPYR PGEGTWQWVDLWNAL
Subjt:  MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNAL

Query:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS
          E+            S  ++   L L S+ S K L          LTPS+AIYDTMQSLKS V THCVGYAY+LAAFLLAAGEKG+R AMPLSRIALQS
Subjt:  VSEK------------SKYVILCNLVL-SLHSRKMLL--------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQS

Query:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        P GAARGQADD++NEANELLRIRDYLF+ELSKKTGQPVE+INKDLSRMKRFNAQ AL+YGLIDRIVRP RIKADAPRKD G GLG
Subjt:  PAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

SwissProt top hitse value%identityAlignment
Q5N1Q7 ATP-dependent Clp protease proteolytic subunit 25.2e-3342.27Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALVSEKSKYV---ILCNLVLSLHSRKMLL------------------QLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P VPYR PG    +W+D++N L  E+  ++   +   L  S+ ++ + L                   +T  MAIYDTMQ +KSPV T C+G A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALVSEKSKYV---ILCNLVLSLHSRKMLL------------------QLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSP-AGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV
        ++ AFLL AG KG R A+P SRI +  P  G  R QA DI+ EA E+LRI+  L   ++ +TGQP+EKI KD  R    +A+EA +YGLID+++
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSP-AGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV

Q8DJZ9 ATP-dependent Clp protease proteolytic subunit 21.5e-3544.04Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALVSEK------------SKYVILCNLVLSLH--SRKMLL-------QLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P+VPYR PGE   QW+D++N L  E+            +  ++   L L      + ++L        +T  MAIYDTMQ +KS V T CVG A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALVSEK------------SKYVILCNLVLSLH--SRKMLL-------QLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV
        ++ +FLLAAG KG R A+P SRI +  P+G  RGQA DI+ EA E+LR+R  L +  +  TGQP+EKI +D+ R    +A+EA +YGLIDR++
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV

Q8YP43 Probable ATP-dependent Clp protease proteolytic subunit 38.9e-3342.49Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALVSEK------------SKYVILCNLVLS---------LHSRKMLLQLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P+VPYR PG     W+ +++ L  E+            +  +I   L L          L+       +T  +AIYDTMQ +KS V T CVG A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALVSEK------------SKYVILCNLVLS---------LHSRKMLLQLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV
        ++ +FLLAAG KG R A+P SRI +  P+G  RGQA DI+ EA E+LRIR  L    +  T QP+ KI KD+ R    +AQEA++YGLIDR++
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV

Q9L4P3 ATP-dependent Clp protease proteolytic subunit 35.2e-3342.27Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALVSEKSKYV---ILCNLVLSLHSRKMLL------------------QLTPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P VPYR PG    +W+D++N L  E+  ++   +   L  S+ ++ + L                   +T  MAIYDTMQ +KSPV T C+G A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALVSEKSKYV---ILCNLVLSLHSRKMLL------------------QLTPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSP-AGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV
        ++ AFLL AG KG R A+P SRI +  P  G  R QA DI+ EA E+LRI+  L   ++ +TGQP+EKI KD  R    +A+EA +YGLID+++
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSP-AGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIV

Q9XJ36 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic4.9e-8463.1Show/hide
Query:  QPPL--SFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALVSEK----------
        QP L  S + K++SGLK QS+S       NL  EFYG+V+KSLQS +   KA+R++ +MMPIGTPRVPYR   EGTWQWVD+WNAL  E+          
Subjt:  QPPL--SFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALVSEK----------

Query:  --SKYVILCNLVLSL--HSRKMLL-------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQN
          S  ++   L L     SR++ +        LTPS+AIYDTM+SLKSPV THCVG AYNLA FLLAAGEKG+RFAMPLSRIALQSPAGAARGQADDIQN
Subjt:  --SKYVILCNLVLSL--HSRKMLL-------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQN

Query:  EANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        EA EL RIRDYLF+EL+K TGQP E++ KDLSR+KRFNA+EA++YGLID+IVRPPRIK DAPR+D   GLG
Subjt:  EANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 52.2e-2345.38Show/hide
Query:  LTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLS
        +T  MAI+DTM+ ++  V+T CVG A ++ AFLL+AG KG R+++P SRI +  P G A+G   DI  +ANE+L  +  L   L+  TGQ +EKIN+D  
Subjt:  LTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLS

Query:  RMKRFNAQEALDYGLIDRIVRPPRIKADAP
        R    +A+EA +YGLID ++  P +KA  P
Subjt:  RMKRFNAQEALDYGLIDRIVRPPRIKADAP

AT1G12410.1 CLP protease proteolytic subunit 23.5e-8563.1Show/hide
Query:  QPPL--SFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALVSEK----------
        QP L  S + K++SGLK QS+S       NL  EFYG+V+KSLQS +   KA+R++ +MMPIGTPRVPYR   EGTWQWVD+WNAL  E+          
Subjt:  QPPL--SFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALVSEK----------

Query:  --SKYVILCNLVLSL--HSRKMLL-------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQN
          S  ++   L L     SR++ +        LTPS+AIYDTM+SLKSPV THCVG AYNLA FLLAAGEKG+RFAMPLSRIALQSPAGAARGQADDIQN
Subjt:  --SKYVILCNLVLSL--HSRKMLL-------QLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQN

Query:  EANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG
        EA EL RIRDYLF+EL+K TGQP E++ KDLSR+KRFNA+EA++YGLID+IVRPPRIK DAPR+D   GLG
Subjt:  EANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG

AT4G17040.1 CLP protease R subunit 44.0e-2040.94Show/hide
Query:  TPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSR
        T + AIYD M  +K P+ T CVG A+  AA LL AG KGNR A+P S I ++ P    +GQA D++    E+  I+  +    SK  G+  E+I  D+ R
Subjt:  TPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSR

Query:  MKRFNAQEALDYGLIDRIVRPPRIKAD
         K F+  EA++YG+ID++V   R   D
Subjt:  MKRFNAQEALDYGLIDRIVRPPRIKAD

AT5G23140.1 nuclear-encoded CLP protease P74.0e-2037.4Show/hide
Query:  LTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLS
        +T  +AIYDTMQ ++SP++T C+G A ++A+ LLAAG KG R ++P + + +  P+G   GQA DI     +++R+ D L +   K TGQP++ +  ++ 
Subjt:  LTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLS

Query:  RMKRFNAQEALDYGLIDRIV--RPPRIKADA
        R      +EA  +G+ID ++  RP  +  DA
Subjt:  RMKRFNAQEALDYGLIDRIV--RPPRIKADA

ATCG00670.1 plastid-encoded CLP P1.1e-2233.68Show/hide
Query:  MPIGTPRVPYRTPGEGTWQWVDLWNALVSEK------------SKYVILCNLVLSLHSRKMLLQL---------TPSMAIYDTMQSLKSPVATHCVGYAY
        MPIG P+VP+R+PGEG   WVD++N L  E+            S  +I   + LS+      L L            MAIYDTMQ ++  V T C+G A 
Subjt:  MPIGTPRVPYRTPGEGTWQWVDLWNALVSEK------------SKYVILCNLVLSLHSRKMLLQL---------TPSMAIYDTMQSLKSPVATHCVGYAY

Query:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGA-ARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRI
        ++A+F+L  G    R A P +R+ +  PA +    Q  +   EA ELL++R+ +     ++TG+P+  I++D+ R    +A EA  +G++D +
Subjt:  NLAAFLLAAGEKGNRFAMPLSRIALQSPAGA-ARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKINKDLSRMKRFNAQEALDYGLIDRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTCTCTTCTACTCCGTGTCTTCAACCTCAAATTAAAGTTTCTCAGCCTCCTCTCAGCTTTGCGACGAAGGTTTTCTCGGGACTAAAGCTTCAATCTTCTAGTCC
TTTTGGAGGAGTGAAACCTAATCTTACTGCTGAATTCTATGGGAAAGTTCATAAAAGTTTACAATCCAGGTCACATAACAAAAAGGCCGCTCGTGCACAATTTCAGATGA
TGCCTATAGGGACACCGAGGGTGCCTTATAGAACTCCTGGTGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTAGTAAGTGAGAAATCTAAGTATGTAATTTTG
TGCAATCTAGTCTTATCTCTTCACAGTAGAAAGATGCTGCTGCAGCTAACTCCAAGTATGGCCATCTACGACACAATGCAGAGCTTGAAGAGTCCTGTAGCTACCCATTG
CGTGGGTTATGCTTATAATCTTGCGGCCTTTCTTCTAGCAGCTGGAGAAAAGGGTAACCGCTTTGCAATGCCTCTGTCAAGAATTGCCTTGCAATCCCCAGCTGGAGCTG
CTCGTGGTCAGGCTGATGATATTCAAAATGAAGCAAACGAGCTCTTGAGAATCAGGGATTATCTTTTCGATGAGCTTTCTAAGAAAACAGGCCAGCCTGTTGAAAAGATT
AACAAGGATTTGAGTCGAATGAAGCGCTTTAATGCTCAGGAGGCTCTTGATTATGGGCTTATTGATCGTATAGTCAGGCCACCTCGCATCAAGGCCGATGCACCTCGCAA
GGATGCTGGAACAGGGCTTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTCTCTTCTACTCCGTGTCTTCAACCTCAAATTAAAGTTTCTCAGCCTCCTCTCAGCTTTGCGACGAAGGTTTTCTCGGGACTAAAGCTTCAATCTTCTAGTCC
TTTTGGAGGAGTGAAACCTAATCTTACTGCTGAATTCTATGGGAAAGTTCATAAAAGTTTACAATCCAGGTCACATAACAAAAAGGCCGCTCGTGCACAATTTCAGATGA
TGCCTATAGGGACACCGAGGGTGCCTTATAGAACTCCTGGTGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTAGTAAGTGAGAAATCTAAGTATGTAATTTTG
TGCAATCTAGTCTTATCTCTTCACAGTAGAAAGATGCTGCTGCAGCTAACTCCAAGTATGGCCATCTACGACACAATGCAGAGCTTGAAGAGTCCTGTAGCTACCCATTG
CGTGGGTTATGCTTATAATCTTGCGGCCTTTCTTCTAGCAGCTGGAGAAAAGGGTAACCGCTTTGCAATGCCTCTGTCAAGAATTGCCTTGCAATCCCCAGCTGGAGCTG
CTCGTGGTCAGGCTGATGATATTCAAAATGAAGCAAACGAGCTCTTGAGAATCAGGGATTATCTTTTCGATGAGCTTTCTAAGAAAACAGGCCAGCCTGTTGAAAAGATT
AACAAGGATTTGAGTCGAATGAAGCGCTTTAATGCTCAGGAGGCTCTTGATTATGGGCTTATTGATCGTATAGTCAGGCCACCTCGCATCAAGGCCGATGCACCTCGCAA
GGATGCTGGAACAGGGCTTGGTTAG
Protein sequenceShow/hide protein sequence
MAVSSTPCLQPQIKVSQPPLSFATKVFSGLKLQSSSPFGGVKPNLTAEFYGKVHKSLQSRSHNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALVSEKSKYVIL
CNLVLSLHSRKMLLQLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLLAAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEKI
NKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG