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Spg003071 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003071
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein cornichon homolog 4-like
Genome locationscaffold12:38296436..38297852
RNA-Seq ExpressionSpg003071
SyntenySpg003071
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003377 - Cornichon


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022922295.1 protein cornichon homolog 4-like [Cucurbita moschata]8.6e-3088Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCI YLLTGHWIMS FCV YLYYN+RLY+QRKHLVDV +I+
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY

XP_022957749.1 protein cornichon homolog 4-like [Cucurbita moschata]1.7e-3089.33Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCI YLLTGHWIMSFFCV YLYYNLRLY+QR+HLVDV +I+
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY

XP_022996131.1 protein cornichon homolog 4-like [Cucurbita maxima]1.0e-3090.67Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY
        LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCI YLLTGHWIMSFFC+ YLYYNLRLY+QRKHLVDV +I+
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY

XP_023532889.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]4.6e-3192Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY
        LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCI YLLTGHWIMSFFCV YLYYNLRLY+QRKHLVDV +I+
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY

XP_038907022.1 protein cornichon homolog 4-like [Benincasa hispida]8.6e-3088Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY
        LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCI YLL+GHWIMS FC+ YLYYNLRLY+QRKHLVDV +I+
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY

TrEMBL top hitse value%identityAlignment
A0A6J1DX47 protein cornichon homolog 42.1e-2986.67Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCI YLLTGHWIMS FC  YLYYNLRLY+QR+HLVDV +I+
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY

A0A6J1E8A9 protein cornichon homolog 4-like4.2e-3088Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCI YLLTGHWIMS FCV YLYYN+RLY+QRKHLVDV +I+
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY

A0A6J1H2W0 protein cornichon homolog 4-like8.4e-3189.33Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLCI YLLTGHWIMSFFCV YLYYNLRLY+QR+HLVDV +I+
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY

A0A6J1I130 protein cornichon homolog 4-like1.2e-2986.67Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY
        LMCLADLEFDYINPYDSSSRINKVV+PEFITQGVLC  YLLTGHWIMS FCV YLYYN+RLY+QRKHLVDV +I+
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY

A0A6J1K131 protein cornichon homolog 4-like4.9e-3190.67Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY
        LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCI YLLTGHWIMSFFC+ YLYYNLRLY+QRKHLVDV +I+
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY

SwissProt top hitse value%identityAlignment
Q3EDD7 Probable protein cornichon homolog 28.4e-2872.73Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYEL
        L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+ YLLTGHW M+  C+ YLYYN  LYS+R+HLVDV +I+ L
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYEL

Q84W04 Protein cornichon homolog 48.4e-2872.73Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYEL
        L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+ YLLTGHW M+  C+ YLYYN  LYS+R+HLVDV +I+ L
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYEL

Q8GWT5 Protein cornichon homolog 33.3e-2466.23Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYEL
        L+ LADLEFDYINPYDS+SRIN VV+PE I QG LC+ YL+TGHW M+  CV YLYYN  LYS+++HL+DV +I+ L
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYEL

Q9C7D7 Protein cornichon homolog 12.5e-1646.67Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY
        ++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+++LLT HW+     V    Y+  LY +R++L+DV +++
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY

Q9SZ74 Protein cornichon homolog 51.2e-2158.23Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYELHE
        L CLADLEFD INPYD SSRIN++V+PEF  QG+LC+ Y+LTGHW M+   + +L+YN+RLY +R+HL DV ++Y  ++
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYELHE

Arabidopsis top hitse value%identityAlignment
AT1G12340.1 Cornichon family protein5.9e-2972.73Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYEL
        L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+ YLLTGHW M+  C+ YLYYN  LYS+R+HLVDV +I+ L
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYEL

AT1G12390.1 Cornichon family protein5.9e-2972.73Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYEL
        L+CLADLEFDYINPYDS+SRIN VV+PEFI QGVLC+ YLLTGHW M+  C+ YLYYN  LYS+R+HLVDV +I+ L
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYEL

AT1G62880.1 Cornichon family protein2.3e-2566.23Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYEL
        L+ LADLEFDYINPYDS+SRIN VV+PE I QG LC+ YL+TGHW M+  CV YLYYN  LYS+++HL+DV +I+ L
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYEL

AT3G12180.1 Cornichon family protein1.8e-1746.67Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY
        ++CL DLE DY+NP+++S+RIN++V+PEFI QG LC+++LLT HW+     V    Y+  LY +R++L+DV +++
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIY

AT4G12090.1 Cornichon family protein8.3e-2358.23Show/hide
Query:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYELHE
        L CLADLEFD INPYD SSRIN++V+PEF  QG+LC+ Y+LTGHW M+   + +L+YN+RLY +R+HL DV ++Y  ++
Subjt:  LMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSYLYYNLRLYSQRKHLVDVHQIYELHE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCGTTTCCTCGCCGGTGTTTCGCCGTTAGGTCTCGATTAAGGAGGCTGGTTGTTCGGGCTGTTGGTCTCGGTTTAGAGCACTGCAGTGTGCCTTGGTTTGTGCA
ACTAAATAGGCGAGAGGGTCGGTGTCTTTCCGGTAAAGCATCAGGCAGCGATTGTGTTCTAATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCTTATGACTCCT
CATCACGGATAAACAAAGTGGTTGTACCTGAGTTCATCACTCAAGGAGTCTTGTGTATCGTCTATCTTTTAACAGGGCATTGGATTATGTCATTCTTTTGTGTGTCCTAC
CTCTATTACAATTTAAGATTGTACAGTCAGCGAAAGCACCTGGTAGATGTTCATCAGATTTATGAGTTGCATGAATCTCGAGCCCAAATTAAACCAAATATTTTGCCATT
TACTCTGCCCCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGATCGTTTCCTCGCCGGTGTTTCGCCGTTAGGTCTCGATTAAGGAGGCTGGTTGTTCGGGCTGTTGGTCTCGGTTTAGAGCACTGCAGTGTGCCTTGGTTTGTGCA
ACTAAATAGGCGAGAGGGTCGGTGTCTTTCCGGTAAAGCATCAGGCAGCGATTGTGTTCTAATGTGCTTAGCTGATCTTGAGTTTGATTATATCAACCCTTATGACTCCT
CATCACGGATAAACAAAGTGGTTGTACCTGAGTTCATCACTCAAGGAGTCTTGTGTATCGTCTATCTTTTAACAGGGCATTGGATTATGTCATTCTTTTGTGTGTCCTAC
CTCTATTACAATTTAAGATTGTACAGTCAGCGAAAGCACCTGGTAGATGTTCATCAGATTTATGAGTTGCATGAATCTCGAGCCCAAATTAAACCAAATATTTTGCCATT
TACTCTGCCCCCTTAA
Protein sequenceShow/hide protein sequence
MRSFPRRCFAVRSRLRRLVVRAVGLGLEHCSVPWFVQLNRREGRCLSGKASGSDCVLMCLADLEFDYINPYDSSSRINKVVVPEFITQGVLCIVYLLTGHWIMSFFCVSY
LYYNLRLYSQRKHLVDVHQIYELHESRAQIKPNILPFTLPP