; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003120 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003120
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold4:30688999..30694150
RNA-Seq ExpressionSpg003120
SyntenySpg003120
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037436.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.9e-2034.46Show/hide
Query:  GDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSSTS-WNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRSLTRKL
        G+ +SFW  NW A  SL +T+ +LY+LS + N +I +LWD +T+ WN+  RR L + EI ++ +L G +    +    ++ +WT    G ++  S  R+L
Subjt:  GDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSSTS-WNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRSLTRKL

Query:  ASSSPLP----KEWFRAIWKTKSPKKVNIFCWILLNCNLNTSEILQRK
         S  P P    + ++  +WK+K PKK   F W L + ++NT+++LQ++
Subjt:  ASSSPLP----KEWFRAIWKTKSPKKVNIFCWILLNCNLNTSEILQRK

TYK00226.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.9e-2034.46Show/hide
Query:  GDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSSTS-WNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRSLTRKL
        G+ +SFW  NW A  SL +T+ +LY+LS + N +I +LWD +T+ WN+  RR L + EI ++ +L G +    +    ++ +WT    G ++  S  R+L
Subjt:  GDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSSTS-WNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRSLTRKL

Query:  ASSSPLP----KEWFRAIWKTKSPKKVNIFCWILLNCNLNTSEILQRK
         S  P P    + ++  +WK+K PKK   F W L + ++NT+++LQ++
Subjt:  ASSSPLP----KEWFRAIWKTKSPKKVNIFCWILLNCNLNTSEILQRK

XP_022155195.1 uncharacterized protein LOC111022333 [Momordica charantia]6.7e-2449.22Show/hide
Query:  FKQGWGDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSST-SWNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRS
        FK G GD I FW   W     LKD FS++Y +S++P+ S+ + WD+ T SW I  RR LK+DEI  F  L+  + S    +  D R+W+LEPSG+FS+ S
Subjt:  FKQGWGDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSST-SWNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRS

Query:  LTRKLASSSPLPKEWFRAIWKTKSPKKV
        ++ KL S+S LPK  F+AIWK+KSPKKV
Subjt:  LTRKLASSSPLPKEWFRAIWKTKSPKKV

XP_038878804.1 uncharacterized protein LOC120070945 isoform X8 [Benincasa hispida]1.1e-1836.73Show/hide
Query:  SFKQGWGDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSSTSWNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRS
        +F  G+G +I FW D WA  +SLK +F +L++++  P   I D WD       +FR+LLK D I  F  L+G ++  KV  + +S  W+L+    FS++S
Subjt:  SFKQGWGDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSSTSWNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRS

Query:  LTRKLASSSPLPKEWFRAIWKTKSPKKVNIFCWILLNCNLNTSEILQ
        L + L +SS + KE F A+W++++P++VNI  WI+ N      E+ +
Subjt:  LTRKLASSSPLPKEWFRAIWKTKSPKKVNIFCWILLNCNLNTSEILQ

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]1.2e-2542Show/hide
Query:  SFKQGWGDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSS-TSWNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIR
        +FK G G +I+FW D W   +     FS L+ +++ PN S+ D WD++  SW+I FRR LK++E++ F  L+  I S     S D RVW++  +  ++++
Subjt:  SFKQGWGDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSS-TSWNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIR

Query:  SLTRKLASSSPLPKEWFRAIWKTKSPKKVNIFCWILLNCNLNTSEILQRK
        SL   L   SPL K  F  IWKTKSP++VNI  WI+L   LN +E+LQ+K
Subjt:  SLTRKLASSSPLPKEWFRAIWKTKSPKKVNIFCWILLNCNLNTSEILQRK

TrEMBL top hitse value%identityAlignment
A0A5A7T5L3 LINE-1 retrotransposable element ORF2 protein2.8e-2034.46Show/hide
Query:  GDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSSTS-WNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRSLTRKL
        G+ +SFW  NW A  SL +T+ +LY+LS + N +I +LWD +T+ WN+  RR L + EI ++ +L G +    +    ++ +WT    G ++  S  R+L
Subjt:  GDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSSTS-WNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRSLTRKL

Query:  ASSSPLP----KEWFRAIWKTKSPKKVNIFCWILLNCNLNTSEILQRK
         S  P P    + ++  +WK+K PKK   F W L + ++NT+++LQ++
Subjt:  ASSSPLP----KEWFRAIWKTKSPKKVNIFCWILLNCNLNTSEILQRK

A0A5D3BPP1 LINE-1 retrotransposable element ORF2 protein2.8e-2034.46Show/hide
Query:  GDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSSTS-WNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRSLTRKL
        G+ +SFW  NW A  SL +T+ +LY+LS + N +I +LWD +T+ WN+  RR L + EI ++ +L G +    +    ++ +WT    G ++  S  R+L
Subjt:  GDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSSTS-WNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRSLTRKL

Query:  ASSSPLP----KEWFRAIWKTKSPKKVNIFCWILLNCNLNTSEILQRK
         S  P P    + ++  +WK+K PKK   F W L + ++NT+++LQ++
Subjt:  ASSSPLP----KEWFRAIWKTKSPKKVNIFCWILLNCNLNTSEILQRK

A0A5D3C5F2 Uncharacterized protein1.6e-1845.76Show/hide
Query:  SFKQGWGDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSST-SWNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIR
        SFK G G++I+FW D W    S +  FS L+ +S  PN S+  LWD+ST SW+I+FRRL KE+EI+ F  L+  +S+ +V  S D R W+L+PS  FS +
Subjt:  SFKQGWGDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSST-SWNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIR

Query:  SLTRKLASSSPLPKEWFR
        S    LA SSPL +  ++
Subjt:  SLTRKLASSSPLPKEWFR

A0A5D3DH32 Uncharacterized protein9.1e-1941.43Show/hide
Query:  KRIGELFPKSFKQGWGDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSST-SWNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTL
        K++  L P  FK G G +++FW D+WA    LK   S+L+ ++  P  S+   WDS T SW I+FRRLLK++EI  F SL+  +SS ++    D R+W+L
Subjt:  KRIGELFPKSFKQGWGDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSST-SWNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTL

Query:  EPSGVFSIRSLTRKLASSSPLPKEWFRAIWKTKSPKKVNI
        +  G +S++SL+  L+ S PL K  ++A+WKT S ++ NI
Subjt:  EPSGVFSIRSLTRKLASSSPLPKEWFRAIWKTKSPKKVNI

A0A6J1DLR8 uncharacterized protein LOC1110223333.2e-2449.22Show/hide
Query:  FKQGWGDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSST-SWNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRS
        FK G GD I FW   W     LKD FS++Y +S++P+ S+ + WD+ T SW I  RR LK+DEI  F  L+  + S    +  D R+W+LEPSG+FS+ S
Subjt:  FKQGWGDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDLWDSST-SWNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRS

Query:  LTRKLASSSPLPKEWFRAIWKTKSPKKV
        ++ KL S+S LPK  F+AIWK+KSPKKV
Subjt:  LTRKLASSSPLPKEWFRAIWKTKSPKKV

SwissProt top hitse value%identityAlignment
Q8L718 ALBINO3-like protein 2, chloroplastic1.2e-0468.57Show/hide
Query:  WAVIASSTLALRFTLLPLLIVQLNKLKRIGELFPK
        W +IASST+A+R  LLPLLI+QL KLK I EL PK
Subjt:  WAVIASSTLALRFTLLPLLIVQLNKLKRIGELFPK

Arabidopsis top hitse value%identityAlignment
AT1G65080.1 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain8.8e-0668.57Show/hide
Query:  WAVIASSTLALRFTLLPLLIVQLNKLKRIGELFPK
        W +IASST+A+R  LLPLLI+QL KLK I EL PK
Subjt:  WAVIASSTLALRFTLLPLLIVQLNKLKRIGELFPK

AT3G44370.1 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain1.7e-0438.36Show/hide
Query:  WGLFFDSFARQMVNYLDVRVMIEQFLLHPIYQGKGRFLWAVIASSTLALRFTLLPLLIVQLNKLKRIGELFPK
        +GL F   ++ + NY D        LL   +   G   W VIA+ST+A R  LLP+LI+Q  + KRI +  PK
Subjt:  WGLFFDSFARQMVNYLDVRVMIEQFLLHPIYQGKGRFLWAVIASSTLALRFTLLPLLIVQLNKLKRIGELFPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCAAGAAGGTCTCAACCAGTGTGGGTGGAGACTCAACATCGATGGGCAAAGAGGCGGAGACTATCACCGTCCTCTCACCACAAGAAACGACTGCACGCTTGCT
GTCAGTCGAAGATGACGTGCGTGAGATTAAAAAAATCTTAGAGATGATATGCGAAAGAATGGGCTGCAAGATTGGACAGCAAGCCTCGGAATTTCAAGAACATGAGAGTA
CGGGAAAAAGGCCGCAAGAATTTCATAAGGAAGGTGGCAGAACAAAAAATTGGCAAGATAGGCAAATTTTTGAGGGGAAACCATCTCAAGAAATGGTGACAGCACCAAGA
ATTCTCCAAGAACAACATTTGGGATTTCAAGAATTCAATAGCAACCGCCTGTTTAGAAGACAACCCGTATGGTCTAAAGACACTTCCAGTCAAGAAGAAGATGAACCTGT
GGAATTTCAAATGGGAAGGCAAAGAGAACGAAGGTTCATCTTCTTCTTGACTGGAAGTGTCTTTAGACCATACGGGTTGTCTTCTAAACAGGCAGTTGCTATTGAATTCT
TGAAATCCCAAATGTTGTTCTTGGAGAATTCTTGGTGCTTCGTTTCTTGTGGTGAGAGGACGGTGATAGTCTCCGCCTCTTTGCCCATCGATGTTGAGTCTCCACCCACA
CTGGTTGAGACCTTCTTGGATGCCATCGAGGAAGCGCCCAAAATCACACGCTCTGATACCAAATATGATGTCACAACTCTGCTTTCTTTGATTGAGGAGTTTGAGTTTAG
GTTGGGGAAGGGAGATAGTCGTTGTCGGAGTCCTAACCGTACTGAGGGATTCTCGTGTAAATCCTACTTCCGCTCGCTATTGAATCCTCCTCCCCATAGCAAATCCATTT
TCTCTCTTTTGTGGAAGGTGAAAGCTCCAAGTAAGGCGAAGGAAGATTTGGATCATATTATGTTGAGATGTGATTTTGCTCACTTTGCTTGGGGCCTTTTCTTTGACTCT
TTTGCAAGGCAGATGGTAAACTACCTGGATGTGAGGGTGATGATCGAACAATTCCTTCTCCATCCGATATACCAAGGCAAAGGAAGATTTTTGTGGGCAGTTATTGCTTC
ATCAACTTTAGCTCTCAGATTTACGTTGCTGCCCTTACTCATTGTTCAACTCAACAAGTTGAAGAGGATTGGAGAATTGTTTCCTAAGTCTTTCAAACAGGGTTGGGGAG
ATCAAATTTCTTTTTGGAAAGATAATTGGGCTGCATGTGCTTCTTTAAAGGATACTTTTTCGCAACTTTATTCTCTTTCATCATCTCCTAATACGTCGATAACTGATTTA
TGGGATTCAAGTACTTCATGGAATATTATTTTTAGAAGACTTTTGAAGGAAGATGAGATTGCTGTCTTTGTCTCCTTAATGGGTAGTATTTCTTCTTTTAAAGTTGGTAG
TTCAAGTGATTCTAGAGTTTGGACTCTAGAACCTTCTGGGGTATTTTCAATAAGGTCTTTGACAAGAAAGTTGGCTTCTTCTTCACCTTTACCTAAAGAGTGGTTTCGGG
CAATTTGGAAAACGAAAAGTCCAAAGAAAGTCAACATATTTTGTTGGATATTACTCAATTGCAACCTCAATACATCAGAAATCTTGCAACGAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCCAAGAAGGTCTCAACCAGTGTGGGTGGAGACTCAACATCGATGGGCAAAGAGGCGGAGACTATCACCGTCCTCTCACCACAAGAAACGACTGCACGCTTGCT
GTCAGTCGAAGATGACGTGCGTGAGATTAAAAAAATCTTAGAGATGATATGCGAAAGAATGGGCTGCAAGATTGGACAGCAAGCCTCGGAATTTCAAGAACATGAGAGTA
CGGGAAAAAGGCCGCAAGAATTTCATAAGGAAGGTGGCAGAACAAAAAATTGGCAAGATAGGCAAATTTTTGAGGGGAAACCATCTCAAGAAATGGTGACAGCACCAAGA
ATTCTCCAAGAACAACATTTGGGATTTCAAGAATTCAATAGCAACCGCCTGTTTAGAAGACAACCCGTATGGTCTAAAGACACTTCCAGTCAAGAAGAAGATGAACCTGT
GGAATTTCAAATGGGAAGGCAAAGAGAACGAAGGTTCATCTTCTTCTTGACTGGAAGTGTCTTTAGACCATACGGGTTGTCTTCTAAACAGGCAGTTGCTATTGAATTCT
TGAAATCCCAAATGTTGTTCTTGGAGAATTCTTGGTGCTTCGTTTCTTGTGGTGAGAGGACGGTGATAGTCTCCGCCTCTTTGCCCATCGATGTTGAGTCTCCACCCACA
CTGGTTGAGACCTTCTTGGATGCCATCGAGGAAGCGCCCAAAATCACACGCTCTGATACCAAATATGATGTCACAACTCTGCTTTCTTTGATTGAGGAGTTTGAGTTTAG
GTTGGGGAAGGGAGATAGTCGTTGTCGGAGTCCTAACCGTACTGAGGGATTCTCGTGTAAATCCTACTTCCGCTCGCTATTGAATCCTCCTCCCCATAGCAAATCCATTT
TCTCTCTTTTGTGGAAGGTGAAAGCTCCAAGTAAGGCGAAGGAAGATTTGGATCATATTATGTTGAGATGTGATTTTGCTCACTTTGCTTGGGGCCTTTTCTTTGACTCT
TTTGCAAGGCAGATGGTAAACTACCTGGATGTGAGGGTGATGATCGAACAATTCCTTCTCCATCCGATATACCAAGGCAAAGGAAGATTTTTGTGGGCAGTTATTGCTTC
ATCAACTTTAGCTCTCAGATTTACGTTGCTGCCCTTACTCATTGTTCAACTCAACAAGTTGAAGAGGATTGGAGAATTGTTTCCTAAGTCTTTCAAACAGGGTTGGGGAG
ATCAAATTTCTTTTTGGAAAGATAATTGGGCTGCATGTGCTTCTTTAAAGGATACTTTTTCGCAACTTTATTCTCTTTCATCATCTCCTAATACGTCGATAACTGATTTA
TGGGATTCAAGTACTTCATGGAATATTATTTTTAGAAGACTTTTGAAGGAAGATGAGATTGCTGTCTTTGTCTCCTTAATGGGTAGTATTTCTTCTTTTAAAGTTGGTAG
TTCAAGTGATTCTAGAGTTTGGACTCTAGAACCTTCTGGGGTATTTTCAATAAGGTCTTTGACAAGAAAGTTGGCTTCTTCTTCACCTTTACCTAAAGAGTGGTTTCGGG
CAATTTGGAAAACGAAAAGTCCAAAGAAAGTCAACATATTTTGTTGGATATTACTCAATTGCAACCTCAATACATCAGAAATCTTGCAACGAAAATGA
Protein sequenceShow/hide protein sequence
MASKKVSTSVGGDSTSMGKEAETITVLSPQETTARLLSVEDDVREIKKILEMICERMGCKIGQQASEFQEHESTGKRPQEFHKEGGRTKNWQDRQIFEGKPSQEMVTAPR
ILQEQHLGFQEFNSNRLFRRQPVWSKDTSSQEEDEPVEFQMGRQRERRFIFFLTGSVFRPYGLSSKQAVAIEFLKSQMLFLENSWCFVSCGERTVIVSASLPIDVESPPT
LVETFLDAIEEAPKITRSDTKYDVTTLLSLIEEFEFRLGKGDSRCRSPNRTEGFSCKSYFRSLLNPPPHSKSIFSLLWKVKAPSKAKEDLDHIMLRCDFAHFAWGLFFDS
FARQMVNYLDVRVMIEQFLLHPIYQGKGRFLWAVIASSTLALRFTLLPLLIVQLNKLKRIGELFPKSFKQGWGDQISFWKDNWAACASLKDTFSQLYSLSSSPNTSITDL
WDSSTSWNIIFRRLLKEDEIAVFVSLMGSISSFKVGSSSDSRVWTLEPSGVFSIRSLTRKLASSSPLPKEWFRAIWKTKSPKKVNIFCWILLNCNLNTSEILQRK