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Spg003121 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003121
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-pro-like protein
Genome locationscaffold4:33357363..33360283
RNA-Seq ExpressionSpg003121
SyntenySpg003121
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY07994.1 Uncharacterized protein TCM_022312 [Theobroma cacao]2.6e-0629.57Show/hide
Query:  QALEGECNRLANQV----AEAEGLRQEY-DLLTQNYEDTQGC-------------LAEVIRIFRIMATKAE-------------DNYSTLFKIAR-----
        Q L+ +C+ L   +    A+ E +RQEY  +  +N   TQ               + EV    R+MA K E             +   +  K+ R     
Subjt:  QALEGECNRLANQV----AEAEGLRQEY-DLLTQNYEDTQGC-------------LAEVIRIFRIMATKAE-------------DNYSTLFKIAR-----

Query:  ----RSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTPP
              +  H Y TRA+ KIM DQ++E++  +++  E +  Q++K++EL+ST KGK    S     D   +++N  P+YPPGFTPP
Subjt:  ----RSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTPP

KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]7.2e-0933.33Show/hide
Query:  LRQEYDLLTQNYEDTQGCLAEVIRIFRIMATKAEDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVI
        ++ +YDL T++++     + + I   R+++ +A        K +  +  RHPY TR + +IME+++ + +  ++Q++  L EQV+K++ELLS  KGK  +
Subjt:  LRQEYDLLTQNYEDTQGCLAEVIRIFRIMATKAEDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVI

Query:  DSPPPTRDSLGSQSNESPLYPPGFTP
        D+   T+ S   Q  + P+YPPGFTP
Subjt:  DSPPPTRDSLGSQSNESPLYPPGFTP

KAA0059732.1 Gag-pro-like protein [Cucumis melo var. makuwa]9.4e-0941.94Show/hide
Query:  EDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTP
        +D Y TL    + S  +HPY+TR + +IM+++ N+QVQ + QDVE LK+Q+TK++ELL+T +GK+++ +       L     + P YP GFTP
Subjt:  EDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTP

KAA0060308.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]2.5e-0941.18Show/hide
Query:  KIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTPP-GHHAEKVQSTQHD
        KIA+ S  +HPY+TR + +IM++Q N+QVQ ++QDVE LK+Q+ K++ELL+T +GK+V+         L     + P YP GFTP          +TQ+ 
Subjt:  KIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTPP-GHHAEKVQSTQHD

Query:  SP
        +P
Subjt:  SP

TYK10943.1 glial fibrillary acidic protein-like [Cucumis melo var. makuwa]8.0e-0833.83Show/hide
Query:  EAEGLRQEYDLLTQNYEDTQGCLAEVIRI---FRIMATKAEDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLST
        E E LR++YD      E     L +++R+     + A   + +     KIA+ S  +HPY+TR + +I+++Q N+ VQ ++Q VE LK+Q+TK++ELL+ 
Subjt:  EAEGLRQEYDLLTQNYEDTQGCLAEVIRI---FRIMATKAEDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLST

Query:  SKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTP
         +GKTV  +       L     +   YP  FTP
Subjt:  SKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTP

TrEMBL top hitse value%identityAlignment
A0A061F0F4 G-patch domain-containing protein1.2e-0629.57Show/hide
Query:  QALEGECNRLANQV----AEAEGLRQEY-DLLTQNYEDTQGC-------------LAEVIRIFRIMATKAE-------------DNYSTLFKIAR-----
        Q L+ +C+ L   +    A+ E +RQEY  +  +N   TQ               + EV    R+MA K E             +   +  K+ R     
Subjt:  QALEGECNRLANQV----AEAEGLRQEY-DLLTQNYEDTQGC-------------LAEVIRIFRIMATKAE-------------DNYSTLFKIAR-----

Query:  ----RSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTPP
              +  H Y TRA+ KIM DQ++E++  +++  E +  Q++K++EL+ST KGK    S     D   +++N  P+YPPGFTPP
Subjt:  ----RSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTPP

A0A5A7T1W2 Retrotrans_gag domain-containing protein3.5e-0933.33Show/hide
Query:  LRQEYDLLTQNYEDTQGCLAEVIRIFRIMATKAEDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVI
        ++ +YDL T++++     + + I   R+++ +A        K +  +  RHPY TR + +IME+++ + +  ++Q++  L EQV+K++ELLS  KGK  +
Subjt:  LRQEYDLLTQNYEDTQGCLAEVIRIFRIMATKAEDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVI

Query:  DSPPPTRDSLGSQSNESPLYPPGFTP
        D+   T+ S   Q  + P+YPPGFTP
Subjt:  DSPPPTRDSLGSQSNESPLYPPGFTP

A0A5A7UUY2 Gag-pro-like protein4.5e-0941.94Show/hide
Query:  EDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTP
        +D Y TL    + S  +HPY+TR + +IM+++ N+QVQ + QDVE LK+Q+TK++ELL+T +GK+++ +       L     + P YP GFTP
Subjt:  EDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTP

A0A5D3CGB5 Glial fibrillary acidic protein-like3.9e-0833.83Show/hide
Query:  EAEGLRQEYDLLTQNYEDTQGCLAEVIRI---FRIMATKAEDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLST
        E E LR++YD      E     L +++R+     + A   + +     KIA+ S  +HPY+TR + +I+++Q N+ VQ ++Q VE LK+Q+TK++ELL+ 
Subjt:  EAEGLRQEYDLLTQNYEDTQGCLAEVIRI---FRIMATKAEDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLST

Query:  SKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTP
         +GKTV  +       L     +   YP  FTP
Subjt:  SKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTP

A0A5D3DEF4 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein1.2e-0941.18Show/hide
Query:  KIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTPP-GHHAEKVQSTQHD
        KIA+ S  +HPY+TR + +IM++Q N+QVQ ++QDVE LK+Q+ K++ELL+T +GK+V+         L     + P YP GFTP          +TQ+ 
Subjt:  KIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKLIELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTPP-GHHAEKVQSTQHD

Query:  SP
        +P
Subjt:  SP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCAGCATCAGGCTTTAGAAGGAGAATGTAACCGCCTAGCTAATCAAGTTGCGGAGGCTGAAGGGTTGAGGCAGGAGTATGACCTTCTAACACAAAACTATGAGGA
TACCCAAGGTTGTTTAGCAGAGGTCATAAGAATATTCAGGATCATGGCAACAAAGGCAGAGGATAATTATAGCACATTATTCAAAATAGCCCGACGATCACGAGCTCGAC
ATCCTTACTTCACAAGGGCGCAACGCAAAATCATGGAAGATCAGAATAACGAACAAGTTCAAGATCTAAAGCAGGATGTTGAAATACTAAAGGAGCAAGTAACTAAGCTG
ATTGAGTTATTGTCAACCAGCAAAGGAAAAACAGTCATCGATTCACCACCGCCTACGCGGGATTCACTAGGTTCCCAATCAAATGAGTCTCCTTTATATCCACCAGGATT
CACCCCTCCAGGCCACCATGCAGAGAAGGTGCAGTCAACACAACATGATTCCCCTTATGTGAATAATGCTTATGGGGCTTTGTATTCCTCACAACTCGTCTTTCCTTACA
CCTCCAAGACAGGACCTGGATATCAAGCTCGTCATCAAAGCGCTCAGGTAGAGGATGATCCTACAGTTGAAGTAAAGGGGTTACCACCAGCATCTCTCTTCATTCCAACA
CAACTGAGTAAATCGTTCCTTCACAGGAGTGAATTCCGTCTTGCGAAACTATGTCCCCAGCTATCTATTCGATCTTATCCCCAAAATGGTAGGCTTGTCGAGTCGGCGAT
GCTGGCCACTCTCACCCATGCAGATCAAAGGATAATCTCGCATAAACAGGAGTTCATAGATAGCTCAGGATTAAGAACGAGTTACCTAGGTCATCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGCAGCATCAGGCTTTAGAAGGAGAATGTAACCGCCTAGCTAATCAAGTTGCGGAGGCTGAAGGGTTGAGGCAGGAGTATGACCTTCTAACACAAAACTATGAGGA
TACCCAAGGTTGTTTAGCAGAGGTCATAAGAATATTCAGGATCATGGCAACAAAGGCAGAGGATAATTATAGCACATTATTCAAAATAGCCCGACGATCACGAGCTCGAC
ATCCTTACTTCACAAGGGCGCAACGCAAAATCATGGAAGATCAGAATAACGAACAAGTTCAAGATCTAAAGCAGGATGTTGAAATACTAAAGGAGCAAGTAACTAAGCTG
ATTGAGTTATTGTCAACCAGCAAAGGAAAAACAGTCATCGATTCACCACCGCCTACGCGGGATTCACTAGGTTCCCAATCAAATGAGTCTCCTTTATATCCACCAGGATT
CACCCCTCCAGGCCACCATGCAGAGAAGGTGCAGTCAACACAACATGATTCCCCTTATGTGAATAATGCTTATGGGGCTTTGTATTCCTCACAACTCGTCTTTCCTTACA
CCTCCAAGACAGGACCTGGATATCAAGCTCGTCATCAAAGCGCTCAGGTAGAGGATGATCCTACAGTTGAAGTAAAGGGGTTACCACCAGCATCTCTCTTCATTCCAACA
CAACTGAGTAAATCGTTCCTTCACAGGAGTGAATTCCGTCTTGCGAAACTATGTCCCCAGCTATCTATTCGATCTTATCCCCAAAATGGTAGGCTTGTCGAGTCGGCGAT
GCTGGCCACTCTCACCCATGCAGATCAAAGGATAATCTCGCATAAACAGGAGTTCATAGATAGCTCAGGATTAAGAACGAGTTACCTAGGTCATCTATGA
Protein sequenceShow/hide protein sequence
MLQHQALEGECNRLANQVAEAEGLRQEYDLLTQNYEDTQGCLAEVIRIFRIMATKAEDNYSTLFKIARRSRARHPYFTRAQRKIMEDQNNEQVQDLKQDVEILKEQVTKL
IELLSTSKGKTVIDSPPPTRDSLGSQSNESPLYPPGFTPPGHHAEKVQSTQHDSPYVNNAYGALYSSQLVFPYTSKTGPGYQARHQSAQVEDDPTVEVKGLPPASLFIPT
QLSKSFLHRSEFRLAKLCPQLSIRSYPQNGRLVESAMLATLTHADQRIISHKQEFIDSSGLRTSYLGHL