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Spg003135 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003135
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold4:32780170..32780978
RNA-Seq ExpressionSpg003135
SyntenySpg003135
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]5.9e-0428.47Show/hide
Query:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------
        VRG  V++S   IN V  L D P  E +  + +  E  L  VL T+A   A+W+   +G    +++      A  W H++K+ ++PTTH  T+S      
Subjt:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------

Query:  -------------------ISQTTYKPKGVMFCPGLVTKLCRIA
                           I     +  G +F P L+T+LCR A
Subjt:  -------------------ISQTTYKPKGVMFCPGLVTKLCRIA

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.0e-0428.47Show/hide
Query:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------
        VRG  V++S   IN V  L D P  E +  + +  +  L  VL T+A   A+W+   +G    +++      A  W H++K+R++PTTH  T+S      
Subjt:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------

Query:  -------------------ISQTTYKPKGVMFCPGLVTKLCRIA
                           I     +  G +F P L+T+LCR A
Subjt:  -------------------ISQTTYKPKGVMFCPGLVTKLCRIA

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]7.7e-0427.7Show/hide
Query:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------
        VRG  V++S   IN V  L D P  E +  + +  E  L  VL T+A   A+W+   +G    +++      A  W H++K+R++PTTH   +S      
Subjt:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------

Query:  -------------------ISQTTYKPKGVMFCPGLVTKLCRIADIVL
                           I     +  G +F P L+T+LCR A  ++
Subjt:  -------------------ISQTTYKPKGVMFCPGLVTKLCRIADIVL

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]2.2e-0633.33Show/hide
Query:  RGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQW--DGRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLSISQ
        +G TV FS   IN + ++ D P+A GN ++    E+ +   L  +A+P  +W    +G  RTL+++ +  +   W++ +K ++IPTTHD T+S  Q
Subjt:  RGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQW--DGRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLSISQ

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]4.1e-0532.98Show/hide
Query:  MVRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD-GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS
        +++G  V FS   IN + ++ D P+A GN ++    E+ +   L T+ +   QW       +TL +  +  EA  W++ +K RIIPT+HD T+S
Subjt:  MVRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD-GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.8e-0428.47Show/hide
Query:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------
        VRG  V++S   IN V  L D P  E +  + +  E  L  VL T+A   A+W+   +G    +++      A  W H++K+ ++PTTH  T+S      
Subjt:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------

Query:  -------------------ISQTTYKPKGVMFCPGLVTKLCRIA
                           I     +  G +F P L+T+LCR A
Subjt:  -------------------ISQTTYKPKGVMFCPGLVTKLCRIA

A0A2P5BCG4 Uncharacterized protein (Fragment)9.8e-0528.47Show/hide
Query:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------
        VRG  V++S   IN V  L D P  E +  + +  +  L  VL T+A   A+W+   +G    +++      A  W H++K+R++PTTH  T+S      
Subjt:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------

Query:  -------------------ISQTTYKPKGVMFCPGLVTKLCRIA
                           I     +  G +F P L+T+LCR A
Subjt:  -------------------ISQTTYKPKGVMFCPGLVTKLCRIA

A0A2P5CPE8 Uncharacterized protein3.7e-0428.37Show/hide
Query:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------
        VRG  V  S   IN +  L D P  E +  + +  E  LA VL T+A   A+W+   +G    L++  ++  A  W H++K+R++PTTH  T+S      
Subjt:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------

Query:  -------------------ISQTTYKPKGVMFCPGLVTKLC
                           I     +  G +F P L+T++C
Subjt:  -------------------ISQTTYKPKGVMFCPGLVTKLC

A0A2P5DXM3 Uncharacterized protein3.7e-0427.7Show/hide
Query:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------
        VRG  V++S   IN V  L D P  E +  + +  E  L  VL T+A   A+W+   +G    +++      A  W H++K+R++PTTH   +S      
Subjt:  VRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWD--GRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLS------

Query:  -------------------ISQTTYKPKGVMFCPGLVTKLCRIADIVL
                           I     +  G +F P L+T+LCR A  ++
Subjt:  -------------------ISQTTYKPKGVMFCPGLVTKLCRIADIVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCGCGGCAACACGGTCGCCTTCTCTCCCAGCATCATCAATATCGTCCTCGAGCTTCCTGACGCACCCGAGGCCGAAGGCAATGTGCTACTATCCTCGCAGGATGA
GGATTTTCTAGCTGTAGTCCTAGCTACGATAGCTCGACCAAGCGCTCAGTGGGATGGGCGCGGCACTGACAGGACACTGAAGGCGCAGTGGGTGGACTTCGAGGCCACCG
CATGGATGCATTGGATTAAAAACCGAATCATTCCCACAACGCATGATGCCACGTTATCAATCTCGCAGACTACTTACAAGCCGAAGGGAGTTATGTTCTGCCCAGGCCTT
GTCACCAAGCTCTGCCGCATCGCCGACATTGTTCTTGCGCCATCCGATGAAGTCAGGGCAATGCGGCAAACTTTTGACAATCAGTGGCTCGTGTGCATAACCAGAACACA
TAACATTCGACTCCACGTAGCTCCCGTGCCCAGACAAGAGCCAGCCCCTGTGGCAGAAAATCAGCCTCCCGCACCTAAGCCCCAACAAAAGGCCTCGCAAACAAACCCTG
TTTGCGCTCTCAATCAACAAGCCTTGTCGCCACTTTCAACCTCGCCCGTGCGCCGACCCAATCCTCCTGAAGTGTGCGTGGAGACCGTGCATCAAGTCAAAGTCTACGGC
CAACAGACTCCTATCCCACATCTCCCGCGCCAGGAAGAGCAAATTTCTACGCCCTCTGATCAGCTGCCGCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGCGCGGCAACACGGTCGCCTTCTCTCCCAGCATCATCAATATCGTCCTCGAGCTTCCTGACGCACCCGAGGCCGAAGGCAATGTGCTACTATCCTCGCAGGATGA
GGATTTTCTAGCTGTAGTCCTAGCTACGATAGCTCGACCAAGCGCTCAGTGGGATGGGCGCGGCACTGACAGGACACTGAAGGCGCAGTGGGTGGACTTCGAGGCCACCG
CATGGATGCATTGGATTAAAAACCGAATCATTCCCACAACGCATGATGCCACGTTATCAATCTCGCAGACTACTTACAAGCCGAAGGGAGTTATGTTCTGCCCAGGCCTT
GTCACCAAGCTCTGCCGCATCGCCGACATTGTTCTTGCGCCATCCGATGAAGTCAGGGCAATGCGGCAAACTTTTGACAATCAGTGGCTCGTGTGCATAACCAGAACACA
TAACATTCGACTCCACGTAGCTCCCGTGCCCAGACAAGAGCCAGCCCCTGTGGCAGAAAATCAGCCTCCCGCACCTAAGCCCCAACAAAAGGCCTCGCAAACAAACCCTG
TTTGCGCTCTCAATCAACAAGCCTTGTCGCCACTTTCAACCTCGCCCGTGCGCCGACCCAATCCTCCTGAAGTGTGCGTGGAGACCGTGCATCAAGTCAAAGTCTACGGC
CAACAGACTCCTATCCCACATCTCCCGCGCCAGGAAGAGCAAATTTCTACGCCCTCTGATCAGCTGCCGCCTTAG
Protein sequenceShow/hide protein sequence
MVRGNTVAFSPSIINIVLELPDAPEAEGNVLLSSQDEDFLAVVLATIARPSAQWDGRGTDRTLKAQWVDFEATAWMHWIKNRIIPTTHDATLSISQTTYKPKGVMFCPGL
VTKLCRIADIVLAPSDEVRAMRQTFDNQWLVCITRTHNIRLHVAPVPRQEPAPVAENQPPAPKPQQKASQTNPVCALNQQALSPLSTSPVRRPNPPEVCVETVHQVKVYG
QQTPIPHLPRQEEQISTPSDQLPP