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Spg003150 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003150
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold4:33176800..33177253
RNA-Seq ExpressionSpg003150
SyntenySpg003150
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK27243.1 hypothetical protein E5676_scaffold244G00040 [Cucumis melo var. makuwa]7.6e-0546.55Show/hide
Query:  QYIGYLCGGFIDTSNHTNRMLNLIEAKLRIGQNSTSFIPSMITLPPSLAGGKVTVQIR
        Q+ GY  GGFI +SN T+R LNL  A+L++  N+   IP+ + LP  L G ++TV+IR
Subjt:  QYIGYLCGGFIDTSNHTNRMLNLIEAKLRIGQNSTSFIPSMITLPPSLAGGKVTVQIR

TrEMBL top hitse value%identityAlignment
A0A0A0KND3 DUF4283 domain-containing protein9.1e-0441.38Show/hide
Query:  QYIGYLCGGFIDTSNHTNRMLNLIEAKLRIGQNSTSFIPSMITLPPSLAGGKVTVQIR
        ++IG  CGGFI +SN T+R LN   A+L++  N+   +P+ + LP  L G  +T  IR
Subjt:  QYIGYLCGGFIDTSNHTNRMLNLIEAKLRIGQNSTSFIPSMITLPPSLAGGKVTVQIR

A0A0A0KPT1 Uncharacterized protein5.3e-0444.07Show/hide
Query:  LQYIGYLCGGFIDTSNHTNRMLNLIEAKLRIGQNSTSFIPSMITLPPSLAGGKVTVQIR
        +++IG  CGG++  +N T R LN   A+L+I   S   IP+ + LP  LAG K+TV+IR
Subjt:  LQYIGYLCGGFIDTSNHTNRMLNLIEAKLRIGQNSTSFIPSMITLPPSLAGGKVTVQIR

A0A5D3DUB2 Uncharacterized protein3.7e-0546.55Show/hide
Query:  QYIGYLCGGFIDTSNHTNRMLNLIEAKLRIGQNSTSFIPSMITLPPSLAGGKVTVQIR
        Q+ GY  GGFI +SN T+R LNL  A+L++  N+   IP+ + LP  L G ++TV+IR
Subjt:  QYIGYLCGGFIDTSNHTNRMLNLIEAKLRIGQNSTSFIPSMITLPPSLAGGKVTVQIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGCCTTCCATACGTAATTCAATCCTTACCTCCATATCCAATCATTGTTCCATCAACCCTTTCCAGGACAACAAAGTTTTACTTCATAGCAACCCTCCAGTATAT
AGGCTATCTTTGTGGAGGCTTCATCGACACTTCCAACCATACCAACCGTATGCTCAACCTCATAGAGGCAAAATTGAGGATCGGACAAAACTCAACTAGTTTCATTCCAT
CAATGATTACACTTCCCCCCTCCCTCGCTGGTGGCAAAGTTACAGTGCAGATCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGCCTTCCATACGTAATTCAATCCTTACCTCCATATCCAATCATTGTTCCATCAACCCTTTCCAGGACAACAAAGTTTTACTTCATAGCAACCCTCCAGTATAT
AGGCTATCTTTGTGGAGGCTTCATCGACACTTCCAACCATACCAACCGTATGCTCAACCTCATAGAGGCAAAATTGAGGATCGGACAAAACTCAACTAGTTTCATTCCAT
CAATGATTACACTTCCCCCCTCCCTCGCTGGTGGCAAAGTTACAGTGCAGATCCGATGA
Protein sequenceShow/hide protein sequence
MIGLPYVIQSLPPYPIIVPSTLSRTTKFYFIATLQYIGYLCGGFIDTSNHTNRMLNLIEAKLRIGQNSTSFIPSMITLPPSLAGGKVTVQIR