; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003239 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003239
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold4:33072456..33074172
RNA-Seq ExpressionSpg003239
SyntenySpg003239
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MQL77781.1 hypothetical protein [Colocasia esculenta]1.1e-1535.56Show/hide
Query:  AEFVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSN
        AE +S A  + + EE             +S+++   + DKK+ +DN        GR   D    L+ F  YTP ++  EQIL EIRN   L   ++++S+
Subjt:  AEFVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSN

Query:  SDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRRPRQRQRWTSTGNPLRTKTDSPMVEAKAG
           RD+++YC FHRDHGH T  C QLKDEIE LI+ GYL  F  +   ++ RPR+R R  +   P++ + +   +   AG
Subjt:  SDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRRPRQRQRWTSTGNPLRTKTDSPMVEAKAG

XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]3.1e-1530.9Show/hide
Query:  EKRRSAKTAESEARAAEAEARAAEAEAEAKKDNPPWKTEILNTLKELGNPQGYLQKLKDSRAQDLEELIDQVDP--------------SFPEEIMK--AE
        +K + A   ES  +    + +  + E    + + P+  EI+   +   +   Y+ +    + Q +E L D V                SF +      +E
Subjt:  EKRRSAKTAESEARAAEAEARAAEAEAEAKKDNPPWKTEILNTLKELGNPQGYLQKLKDSRAQDLEELIDQVDP--------------SFPEEIMK--AE

Query:  FVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSNSD
         +SRA  YMSA E F SK+ E   KR+          K++R+ +  +G     R R  + +  +KFEKYT T++P EQ+LMEI+N  LL    ++ ++S 
Subjt:  FVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSNSD

Query:  NRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQR----RPRQRQRWTSTGNPLR----TKTDSPMVEAKAGAE
         R K +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q     +   R+  T  G P+      K    + EA+A  E
Subjt:  NRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQR----RPRQRQRWTSTGNPLR----TKTDSPMVEAKAGAE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]5.0e-2140.8Show/hide
Query:  AEFVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSN
        +E +SRA  YMSA E F SK+ E + KR+          K++R+ +  +G     R R  + +  +KFEKYTPT++P EQ+LMEI++  LL    ++K++
Subjt:  AEFVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSN

Query:  SDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQR----RPRQRQRWTSTGNPLRTKT
        S  R K +YCLFHRDHGH+T++C  LK+E+E LIR GYLKE+  + +A Q     +   R+  T  G P+  ++
Subjt:  SDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQR----RPRQRQRWTSTGNPLRTKT

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]8.0e-1940.34Show/hide
Query:  AEFVSRAHEYMSAEELF------KSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVH
        AE +SRA +YMSAEE F      + K+++++ +RS      S+ +K+ R      G+ D  R          KFEKYTPT++P EQ+LMEI++  LL   
Subjt:  AEFVSRAHEYMSAEELF------KSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVH

Query:  RKLKSNSDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEF------TTKAEADQRRPRQRQRWTSTGN
          +K+  + R K +YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+      T   E D + P +  R    G+
Subjt:  RKLKSNSDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEF------TTKAEADQRRPRQRQRWTSTGN

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]1.8e-1838.55Show/hide
Query:  AEFVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSN
        +E +SRA  YMSA E F SK+ E + KR+          K++R+ +  +G     R R  + +  +KFEKYTPT++P EQ+LMEI++  LL    ++K  
Subjt:  AEFVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSN

Query:  SDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRRPRQRQRWTSTGNPLRTKTDSPMVEAKA
        S  R K +YCLFHRDH H+T++   LK+E+E LIR GYL+E+  + +A Q    ++    S    +RT    P+    A
Subjt:  SDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRRPRQRQRWTSTGNPLRTKTDSPMVEAKA

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.5e-1530.9Show/hide
Query:  EKRRSAKTAESEARAAEAEARAAEAEAEAKKDNPPWKTEILNTLKELGNPQGYLQKLKDSRAQDLEELIDQVDP--------------SFPEEIMK--AE
        +K + A   ES  +    + +  + E    + + P+  EI+   +   +   Y+ +    + Q +E L D V                SF +      +E
Subjt:  EKRRSAKTAESEARAAEAEARAAEAEAEAKKDNPPWKTEILNTLKELGNPQGYLQKLKDSRAQDLEELIDQVDP--------------SFPEEIMK--AE

Query:  FVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSNSD
         +SRA  YMSA E F SK+ E   KR+          K++R+ +  +G     R R  + +  +KFEKYT T++P EQ+LMEI+N  LL    ++ ++S 
Subjt:  FVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSNSD

Query:  NRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQR----RPRQRQRWTSTGNPLR----TKTDSPMVEAKAGAE
         R K +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+  + +A Q     +   R+  T  G P+      K    + EA+A  E
Subjt:  NRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQR----RPRQRQRWTSTGNPLR----TKTDSPMVEAKAGAE

A0A6J1DWY0 uncharacterized protein LOC1110252932.4e-2140.8Show/hide
Query:  AEFVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSN
        +E +SRA  YMSA E F SK+ E + KR+          K++R+ +  +G     R R  + +  +KFEKYTPT++P EQ+LMEI++  LL    ++K++
Subjt:  AEFVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSN

Query:  SDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQR----RPRQRQRWTSTGNPLRTKT
        S  R K +YCLFHRDHGH+T++C  LK+E+E LIR GYLKE+  + +A Q     +   R+  T  G P+  ++
Subjt:  SDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQR----RPRQRQRWTSTGNPLRTKT

A0A6J1DYL6 uncharacterized protein LOC1110257858.6e-1938.55Show/hide
Query:  AEFVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSN
        +E +SRA  YMSA E F SK+ E + KR+          K++R+ +  +G     R R  + +  +KFEKYTPT++P EQ+LMEI++  LL    ++K  
Subjt:  AEFVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSN

Query:  SDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRRPRQRQRWTSTGNPLRTKTDSPMVEAKA
        S  R K +YCLFHRDH H+T++   LK+E+E LIR GYL+E+  + +A Q    ++    S    +RT    P+    A
Subjt:  SDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRRPRQRQRWTSTGNPLRTKTDSPMVEAKA

A0A6J1DZ52 uncharacterized protein LOC1110256123.9e-1940.34Show/hide
Query:  AEFVSRAHEYMSAEELF------KSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVH
        AE +SRA +YMSAEE F      + K+++++ +RS      S+ +K+ R      G+ D  R          KFEKYTPT++P EQ+LMEI++  LL   
Subjt:  AEFVSRAHEYMSAEELF------KSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVH

Query:  RKLKSNSDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEF------TTKAEADQRRPRQRQRWTSTGN
          +K+  + R K +YCLFHRDHGH+T +C  LK+E+E LIR GYLKE+      T   E D + P +  R    G+
Subjt:  RKLKSNSDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEF------TTKAEADQRRPRQRQRWTSTGN

A0A7N2N013 Ribonuclease H6.4e-1439.24Show/hide
Query:  AEFVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSN
        +E + RA +YM+AE+   S++ +R  KR      DSR+D+ ++    G  R D  R +P  G    +F  +TP + P +Q+LM+I++   L    KLKS+
Subjt:  AEFVSRAHEYMSAEELFKSKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSN

Query:  SDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRRPRQRQR
           R + +YC FHRDHGH T +C  LK +IEALIR G L++F  K   DQ    Q  R
Subjt:  SDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEADQRRPRQRQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCTGAGATCGGCCTCGAACTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAACAAGCTGAT
CTCAAAATTGCTGCTCTCGAAAACAAAGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATCAGAGACGAGATCGAAGGGAAAGAAGACTGACAGCATGA
CCAGCAAGATCAGGGGGCTCAAACCTACTGATCGTACAATTTTGAGGAGCCTAGAGTCAATCACACTTAAAGGACGTGACTACACAATTTCTACCCCAAGCTACGGTCAT
ACTAAGACAGACCAGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCTGAGTCTGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGC
CGAGGCTAAGAAAGACAATCCCCCTTGGAAGACCGAGATTTTAAACACACTAAAGGAGCTTGGAAATCCACAGGGATACCTGCAGAAGTTAAAGGACTCAAGAGCACAAG
ACTTGGAAGAATTGATCGACCAAGTTGACCCGTCCTTCCCAGAAGAAATCATGAAAGCCGAGTTTGTCTCCCGGGCACATGAATACATGAGCGCAGAGGAGTTGTTCAAG
TCAAAGAAGTCAGAACGTGAACACAAGAGGTCTTCTTCATCTGACCACGACAGTAGGAAGGACAAAAAGCAGCGGACCGACAACCATGGCCGAGGCCGAGCAGACCATGG
TCGAGGCCGACCAGACCGAGGCAACTACTTGAAGAAATTTGAGAAGTACACCCCCACTTCAATCCCACAGGAGCAGATCTTGATGGAAATACGGAATACAAACTTACTCA
ACGTGCATAGAAAGCTGAAGTCAAACTCTGATAACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGAACTGCATTCAGCTAAAGGAC
GAGATTGAAGCACTGATTCGGAACGGATACTTGAAGGAGTTCACCACTAAGGCCGAGGCCGACCAGAGACGACCCAGGCAAAGACAAAGGTGGACCTCAACTGGAAATCC
ATTGAGGACCAAGACAGACTCTCCTATGGTAGAGGCCAAGGCCGGGGCCGAGCCCTACCACACTTCATGCCAGGGTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCTGAGATCGGCCTCGAACTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAACAAGCTGAT
CTCAAAATTGCTGCTCTCGAAAACAAAGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACACTGCAGAATCAGAGACGAGATCGAAGGGAAAGAAGACTGACAGCATGA
CCAGCAAGATCAGGGGGCTCAAACCTACTGATCGTACAATTTTGAGGAGCCTAGAGTCAATCACACTTAAAGGACGTGACTACACAATTTCTACCCCAAGCTACGGTCAT
ACTAAGACAGACCAGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCTGAGTCTGAGGCCAGAGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGC
CGAGGCTAAGAAAGACAATCCCCCTTGGAAGACCGAGATTTTAAACACACTAAAGGAGCTTGGAAATCCACAGGGATACCTGCAGAAGTTAAAGGACTCAAGAGCACAAG
ACTTGGAAGAATTGATCGACCAAGTTGACCCGTCCTTCCCAGAAGAAATCATGAAAGCCGAGTTTGTCTCCCGGGCACATGAATACATGAGCGCAGAGGAGTTGTTCAAG
TCAAAGAAGTCAGAACGTGAACACAAGAGGTCTTCTTCATCTGACCACGACAGTAGGAAGGACAAAAAGCAGCGGACCGACAACCATGGCCGAGGCCGAGCAGACCATGG
TCGAGGCCGACCAGACCGAGGCAACTACTTGAAGAAATTTGAGAAGTACACCCCCACTTCAATCCCACAGGAGCAGATCTTGATGGAAATACGGAATACAAACTTACTCA
ACGTGCATAGAAAGCTGAAGTCAAACTCTGATAACAGAGACAAAAGCCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGAACTGCATTCAGCTAAAGGAC
GAGATTGAAGCACTGATTCGGAACGGATACTTGAAGGAGTTCACCACTAAGGCCGAGGCCGACCAGAGACGACCCAGGCAAAGACAAAGGTGGACCTCAACTGGAAATCC
ATTGAGGACCAAGACAGACTCTCCTATGGTAGAGGCCAAGGCCGGGGCCGAGCCCTACCACACTTCATGCCAGGGTCAATGA
Protein sequenceShow/hide protein sequence
MVTATSGGHGKKAEIGLELNLLVLGLHCPHPERNKLISKLLLSKTKDPRKGKEPMEHTAESETRSKGKKTDSMTSKIRGLKPTDRTILRSLESITLKGRDYTISTPSYGH
TKTDQRNLIEEKRRSAKTAESEARAAEAEARAAEAEAEAKKDNPPWKTEILNTLKELGNPQGYLQKLKDSRAQDLEELIDQVDPSFPEEIMKAEFVSRAHEYMSAEELFK
SKKSEREHKRSSSSDHDSRKDKKQRTDNHGRGRADHGRGRPDRGNYLKKFEKYTPTSIPQEQILMEIRNTNLLNVHRKLKSNSDNRDKSQYCLFHRDHGHSTRNCIQLKD
EIEALIRNGYLKEFTTKAEADQRRPRQRQRWTSTGNPLRTKTDSPMVEAKAGAEPYHTSCQGQ