; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003247 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003247
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:32388104..32389801
RNA-Seq ExpressionSpg003247
SyntenySpg003247
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8676815.1 hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]9.1e-1425.45Show/hide
Query:  PDEIEESQLQYDRFVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESVNAQ---VKRTFQ------------------
        P  +     ++ +F N  A+A++     R   FE  F       G L   +   +    W++F   P SVN     V R  Q                  
Subjt:  PDEIEESQLQYDRFVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESVNAQ---VKRTFQ------------------

Query:  -----------SAY------LKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPE
                   S Y      L+  A  W  F+K +L+PT+H++TVS  R+LL  +I+ S  +DVG+IIV ++  C  KK   L  PN IT LC++  V E
Subjt:  -----------SAY------LKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPE

Query:  NEGDVILFDKGIIDTPNLARLQRTQEARQGGLVY----GINTILEQLALSASRQEFAERQA---------LTFWNYVRTRDTNLKKALQENFSKPFPALP
        N  D IL     I    L  L   +  +    ++    G      +  L A  +   + Q            F+ YV+ RD  ++   QE         P
Subjt:  NEGDVILFDKGIIDTPNLARLQRTQEARQGGLVY----GINTILEQLALSASRQEFAERQA---------LTFWNYVRTRDTNLKKALQENFSKPFPALP

Query:  AFPEDLLNPWIPPPPVKREGDREEDPGQED
         F +++L+ +     ++ + D EEDP  +D
Subjt:  AFPEDLLNPWIPPPPVKREGDREEDPGQED

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.1e-2434.74Show/hide
Query:  SVNAQVKRTFQSAYLKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVI
        +V+AQ   T   + L   A  W  F+K RLLPTTH  TVS++R+LL  ++L   S++VG++I  EI  C  +K G LF P+ IT LC+ A  P    +  
Subjt:  SVNAQVKRTFQSAYLKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVI

Query:  LFDKGIIDTPNLARLQR---TQEARQ---------------GGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVRTRDTNLKKALQENFSK
        L + G ID   +AR+ +   T+  +Q               G ++  +  + ++L+    +Q       +   +Q   FW Y + RDT LKKALQ NF++
Subjt:  LFDKGIIDTPNLARLQR---TQEARQ---------------GGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVRTRDTNLKKALQENFSK

Query:  PFPALPAFPEDLL
        P P  PAFP+++L
Subjt:  PFPALPAFPEDLL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]2.2e-2335.53Show/hide
Query:  ANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRT
        A  W  F+K RLLPTTH  TVS++R+LL +++L   S++VG++I  EI  C  +K G LF P+ IT LC+ A  P    +  L   G ID   +AR+  T
Subjt:  ANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRT

Query:  QEAR--------------------QGGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVRTRDTNLKKALQENFSKPFPALPAFPEDLL
        QE +                     G ++  +  + ++L+    +Q       +   +Q   FW Y + RDT LKKALQ NF++P P  P FP++LL
Subjt:  QEAR--------------------QGGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVRTRDTNLKKALQENFSKPFPALPAFPEDLL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.1e-2439.02Show/hide
Query:  SVNAQVKRTFQSAYLKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVI
        +V+AQ   T   + L   A  W  F+K RLLPTTH   VS++R+LL  ++L   S++VG++I  EI  C  +K G LF P+ IT LC+ A    NE    
Subjt:  SVNAQVKRTFQSAYLKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVI

Query:  LFDKGIIDTPNLARL------QRTQE-----------ARQGGLVYGINTILEQLALSASRQEFAERQALTFWNYVRTRDTNLKKALQENFSKPFPALPAF
        L + G ID   +AR+      + TQ+           +R  G V      LEQ     S+QE   +Q   FW Y + RDT LKKALQ NF++P P  PAF
Subjt:  LFDKGIIDTPNLARL------QRTQE-----------ARQGGLVYGINTILEQLALSASRQEFAERQALTFWNYVRTRDTNLKKALQENFSKPFPALPAF

Query:  PEDLL
        P+++L
Subjt:  PEDLL

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]1.8e-1732.62Show/hide
Query:  RTFQSAYLKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVIL---FDK
        RT++++ LK  AN WI FI+  L PTTHDS++S E+++L + ++   +++VGK++   I  C K++ GKLF P+ I  L  +AGVPE   D+++    +K
Subjt:  RTFQSAYLKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVIL---FDK

Query:  GIIDTPNLARL-QRTQEARQ-GGLVYGINTILEQLALSASRQEFAERQALTFWNYVRTRDTNLKKALQENFSKPFPALPAFPEDLLN
          ID   +++L +R++  R+  G+   +  +LEQ   S S  +F   Q       ++T   +L   L+ +  K         EDL N
Subjt:  GIIDTPNLARL-QRTQEARQ-GGLVYGINTILEQLALSASRQEFAERQALTFWNYVRTRDTNLKKALQENFSKPFPALPAFPEDLLN

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)5.5e-2534.74Show/hide
Query:  SVNAQVKRTFQSAYLKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVI
        +V+AQ   T   + L   A  W  F+K RLLPTTH  TVS++R+LL  ++L   S++VG++I  EI  C  +K G LF P+ IT LC+ A  P    +  
Subjt:  SVNAQVKRTFQSAYLKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVI

Query:  LFDKGIIDTPNLARLQR---TQEARQ---------------GGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVRTRDTNLKKALQENFSK
        L + G ID   +AR+ +   T+  +Q               G ++  +  + ++L+    +Q       +   +Q   FW Y + RDT LKKALQ NF++
Subjt:  LFDKGIIDTPNLARLQR---TQEARQ---------------GGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVRTRDTNLKKALQENFSK

Query:  PFPALPAFPEDLL
        P P  PAFP+++L
Subjt:  PFPALPAFPEDLL

A0A2P5CEY2 Uncharacterized protein1.0e-2335.53Show/hide
Query:  ANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRT
        A  W  F+K RLLPTTH  TVS++R+LL +++L   S++VG++I  EI  C  +K G LF P+ IT LC+ A  P    +  L   G ID   +AR+  T
Subjt:  ANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRT

Query:  QEAR--------------------QGGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVRTRDTNLKKALQENFSKPFPALPAFPEDLL
        QE +                     G ++  +  + ++L+    +Q       +   +Q   FW Y + RDT LKKALQ NF++P P  P FP++LL
Subjt:  QEAR--------------------QGGLVYGINTILEQLALSASRQ-------EFAERQALTFWNYVRTRDTNLKKALQENFSKPFPALPAFPEDLL

A0A2P5DXM3 Uncharacterized protein5.5e-2539.02Show/hide
Query:  SVNAQVKRTFQSAYLKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVI
        +V+AQ   T   + L   A  W  F+K RLLPTTH   VS++R+LL  ++L   S++VG++I  EI  C  +K G LF P+ IT LC+ A    NE    
Subjt:  SVNAQVKRTFQSAYLKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVI

Query:  LFDKGIIDTPNLARL------QRTQE-----------ARQGGLVYGINTILEQLALSASRQEFAERQALTFWNYVRTRDTNLKKALQENFSKPFPALPAF
        L + G ID   +AR+      + TQ+           +R  G V      LEQ     S+QE   +Q   FW Y + RDT LKKALQ NF++P P  PAF
Subjt:  LFDKGIIDTPNLARL------QRTQE-----------ARQGGLVYGINTILEQLALSASRQEFAERQALTFWNYVRTRDTNLKKALQENFSKPFPALPAF

Query:  PEDLL
        P+++L
Subjt:  PEDLL

A0A6A2Y697 Reverse transcriptase domain-containing protein4.4e-1425.45Show/hide
Query:  PDEIEESQLQYDRFVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESVNAQ---VKRTFQ------------------
        P  +     ++ +F N  A+A++     R   FE  F       G L   +   +    W++F   P SVN     V R  Q                  
Subjt:  PDEIEESQLQYDRFVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESVNAQ---VKRTFQ------------------

Query:  -----------SAY------LKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPE
                   S Y      L+  A  W  F+K +L+PT+H++TVS  R+LL  +I+ S  +DVG+IIV ++  C  KK   L  PN IT LC++  V E
Subjt:  -----------SAY------LKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPE

Query:  NEGDVILFDKGIIDTPNLARLQRTQEARQGGLVY----GINTILEQLALSASRQEFAERQA---------LTFWNYVRTRDTNLKKALQENFSKPFPALP
        N  D IL     I    L  L   +  +    ++    G      +  L A  +   + Q            F+ YV+ RD  ++   QE         P
Subjt:  NEGDVILFDKGIIDTPNLARLQRTQEARQGGLVY----GINTILEQLALSASRQEFAERQA---------LTFWNYVRTRDTNLKKALQENFSKPFPALP

Query:  AFPEDLLNPWIPPPPVKREGDREEDPGQED
         F +++L+ +     ++ + D EEDP  +D
Subjt:  AFPEDLLNPWIPPPPVKREGDREEDPGQED

A0A6A3AN19 Uncharacterized protein1.7e-1324.92Show/hide
Query:  RFVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESVNAQVK-------------------------------------
        RFV+ +A  ++  L  R   FE GF        DL   +   +  H W +F   P+++NA +                                      
Subjt:  RFVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRTGIADHGWERFCSKPESVNAQVK-------------------------------------

Query:  -RTFQSAYLKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVILFDKGI
         RT     L+  A  W  F+K +LLP +H++TVS +R+LL  +I+   S+D+GKIIV+++    K+    L  PN IT LC++  VPE + D I      
Subjt:  -RTFQSAYLKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSPNTITMLCKRAGVPENEGDVILFDKGI

Query:  IDTPNLARLQRTQEARQGGLVYGINTILEQLALSASRQEFAERQALTFWNYVRTRDTNLKKALQENFSKPFPALPAFPEDLLNPWIPPPPVKREGDREED
        +    +  L   +EA+                    ++E   R A T   + R RD  L  A  E        +  FP  LL+         +  +    
Subjt:  IDTPNLARLQRTQEARQGGLVYGINTILEQLALSASRQEFAERQALTFWNYVRTRDTNLKKALQENFSKPFPALPAFPEDLLNPWIPPPPVKREGDREED

Query:  PGQED
        PG E+
Subjt:  PGQED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTACCCGTGACCCCCGAAGCACCGAAAGTAAAGGCAAAGAAGAAGAAGACACCAGAAGAAAA
AGAAGCGAAAAGAAGAAGAAGACAGCAGAGGGCTGAAGACCAAGAAGCTGTTCAGAAAGTGGTGGAGGATGTTATTGTGGAGGAAGATCCGAAACAACCAGAAGGACGGA
ATCAAGAGCAGTCTGAGCCAGGAGTTGCGGATACAGAGGAAGCAGAGGTTGCGCCTGAAGAAGATAATGAGCAAGAACAGGAGGCTCGTGTGGAGGTGATCATGCCAGAA
GTGCCCAAACACCGCCGTATAAAGAGAAAAGCGGGCCGTGTTAAGGTAGTCAGAACTGATACCCCCTCGCCTCCAACTACTGACTCTGAAAGAGAGAATGCAGGGAAAGA
AGAGTGTGAGAAGAAGAAGGCTGAGGATAAAGTAAGAGAGGAAGCAGAGAAAAAGGCTGAAGAAGAGAGATTGCGAAAGCAAAGGGCAGACAGGGGCAAGAGTGTTGCTG
CGGCATCGGAGGAACCTGATGAAATAGAAGAGTCACAATTGCAGTATGATCGCTTCGTCAACAATCTTGCCAGAGCAAAATATGCAGAGTTGCTGAAAAGAGACTTTCTG
TTTGAAAGGGGATTTAGTGGTGATCTTCCACATTTTCTGAGGACCGGTATTGCAGACCATGGTTGGGAACGGTTTTGTTCAAAGCCTGAATCTGTGAACGCGCAGGTGAA
AAGGACGTTCCAGTCAGCCTATTTGAAGAGGGAAGCAAATACTTGGATAGGATTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGAG
TGCTTCTGGCTTTCGCTATTTTGTGGTCTCTCAGTGTTGATGTGGGAAAAATTATTGTTGATGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGCTGTTTTCCCCG
AATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCCAGAGAATGAAGGAGATGTGATATTATTTGATAAGGGAATCATTGACACGCCTAACTTGGCGCGGCTTCAGCG
TACGCAAGAGGCACGTCAGGGTGGGCTTGTCTACGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGCAGGCAGGAGTTTGCCGAGAGGCAAGCTTTAACCT
TCTGGAACTATGTTAGAACTCGTGATACCAATCTGAAGAAGGCACTACAGGAGAATTTTTCCAAACCATTTCCAGCCCTTCCAGCATTCCCTGAAGATTTATTGAACCCC
TGGATTCCGCCACCACCTGTCAAGAGAGAAGGAGATAGAGAAGAAGATCCTGGTCAGGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTACCCGTGACCCCCGAAGCACCGAAAGTAAAGGCAAAGAAGAAGAAGACACCAGAAGAAAA
AGAAGCGAAAAGAAGAAGAAGACAGCAGAGGGCTGAAGACCAAGAAGCTGTTCAGAAAGTGGTGGAGGATGTTATTGTGGAGGAAGATCCGAAACAACCAGAAGGACGGA
ATCAAGAGCAGTCTGAGCCAGGAGTTGCGGATACAGAGGAAGCAGAGGTTGCGCCTGAAGAAGATAATGAGCAAGAACAGGAGGCTCGTGTGGAGGTGATCATGCCAGAA
GTGCCCAAACACCGCCGTATAAAGAGAAAAGCGGGCCGTGTTAAGGTAGTCAGAACTGATACCCCCTCGCCTCCAACTACTGACTCTGAAAGAGAGAATGCAGGGAAAGA
AGAGTGTGAGAAGAAGAAGGCTGAGGATAAAGTAAGAGAGGAAGCAGAGAAAAAGGCTGAAGAAGAGAGATTGCGAAAGCAAAGGGCAGACAGGGGCAAGAGTGTTGCTG
CGGCATCGGAGGAACCTGATGAAATAGAAGAGTCACAATTGCAGTATGATCGCTTCGTCAACAATCTTGCCAGAGCAAAATATGCAGAGTTGCTGAAAAGAGACTTTCTG
TTTGAAAGGGGATTTAGTGGTGATCTTCCACATTTTCTGAGGACCGGTATTGCAGACCATGGTTGGGAACGGTTTTGTTCAAAGCCTGAATCTGTGAACGCGCAGGTGAA
AAGGACGTTCCAGTCAGCCTATTTGAAGAGGGAAGCAAATACTTGGATAGGATTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGAG
TGCTTCTGGCTTTCGCTATTTTGTGGTCTCTCAGTGTTGATGTGGGAAAAATTATTGTTGATGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGCTGTTTTCCCCG
AATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCCAGAGAATGAAGGAGATGTGATATTATTTGATAAGGGAATCATTGACACGCCTAACTTGGCGCGGCTTCAGCG
TACGCAAGAGGCACGTCAGGGTGGGCTTGTCTACGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGCAGGCAGGAGTTTGCCGAGAGGCAAGCTTTAACCT
TCTGGAACTATGTTAGAACTCGTGATACCAATCTGAAGAAGGCACTACAGGAGAATTTTTCCAAACCATTTCCAGCCCTTCCAGCATTCCCTGAAGATTTATTGAACCCC
TGGATTCCGCCACCACCTGTCAAGAGAGAAGGAGATAGAGAAGAAGATCCTGGTCAGGAGGATTGA
Protein sequenceShow/hide protein sequence
MAKTRARKERDNEEEEVPVTPEAPKVKAKKKKTPEEKEAKRRRRQQRAEDQEAVQKVVEDVIVEEDPKQPEGRNQEQSEPGVADTEEAEVAPEEDNEQEQEARVEVIMPE
VPKHRRIKRKAGRVKVVRTDTPSPPTTDSERENAGKEECEKKKAEDKVREEAEKKAEEERLRKQRADRGKSVAAASEEPDEIEESQLQYDRFVNNLARAKYAELLKRDFL
FERGFSGDLPHFLRTGIADHGWERFCSKPESVNAQVKRTFQSAYLKREANTWIGFIKQRLLPTTHDSTVSRERVLLAFAILWSLSVDVGKIIVDEISGCWKKKVGKLFSP
NTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRTQEARQGGLVYGINTILEQLALSASRQEFAERQALTFWNYVRTRDTNLKKALQENFSKPFPALPAFPEDLLNP
WIPPPPVKREGDREEDPGQED