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Spg003250 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003250
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold4:30573412..30576293
RNA-Seq ExpressionSpg003250
SyntenySpg003250
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047700.1 uncharacterized protein E6C27_scaffold115G002120 [Cucumis melo var. makuwa]2.4e-1882.46Show/hide
Query:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
        G VSFLADLGGLYCIS+GIF YL+VQFEYRIKKLR EDSVM  IRNR+KAQ+HWNK+
Subjt:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
KAE8009876.1 hypothetical protein FH972_006283 [Carpinus fangiana]4.9e-1974.63Show/hide
Query:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKVFFFIFSSPRV
        G VSFLADLGGLYCISIGIF YL+VQFEYRIKKLR ED+VM  IR R+KAQDHW+KV F +F    V
Subjt:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKVFFFIFSSPRV
KAG7020961.1 hypothetical protein SDJN02_17649 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-1882.46Show/hide
Query:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
        G VSFLADLGGLYCIS+GIF YL+VQFEYRIKKLR EDSVM  IRNR+KAQ+HWNK+
Subjt:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
XP_008441901.1 PREDICTED: uncharacterized protein LOC103485904 [Cucumis melo]2.4e-1882.46Show/hide
Query:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
        G VSFLADLGGLYCIS+GIF YL+VQFEYRIKKLR EDSVM  IRNR+KAQ+HWNK+
Subjt:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
XP_023538020.1 uncharacterized protein LOC111798904 [Cucurbita pepo subsp. pepo]2.4e-1882.46Show/hide
Query:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
        G VSFLADLGGLYCIS+GIF YL+VQFEYRIKKLR EDSVM  IRNR+KAQ+HWNK+
Subjt:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
TrEMBL top hitse value%identityAlignment
A0A1S3B545 uncharacterized protein LOC1034859041.2e-1882.46Show/hide
Query:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
        G VSFLADLGGLYCIS+GIF YL+VQFEYRIKKLR EDSVM  IRNR+KAQ+HWNK+
Subjt:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
A0A5D3CAW9 Uncharacterized protein1.2e-1882.46Show/hide
Query:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
        G VSFLADLGGLYCIS+GIF YL+VQFEYRIKKLR EDSVM  IRNR+KAQ+HWNK+
Subjt:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
A0A5N6QSS8 Uncharacterized protein2.3e-1974.63Show/hide
Query:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKVFFFIFSSPRV
        G VSFLADLGGLYCISIGIF YL+VQFEYRIKKLR ED+VM  IR R+KAQDHW+KV F +F    V
Subjt:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKVFFFIFSSPRV
A0A6J1HLS7 uncharacterized protein LOC1114653692.6e-1880.7Show/hide
Query:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
        G VSFLADLGGLYCIS+GIF YL+VQFEYRIKKLR ED+VM  IRNR+KAQ+HWNK+
Subjt:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
A0A7N2KQX2 Uncharacterized protein1.5e-1872.46Show/hide
Query:  NDFSWTK----GGKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
        N  SW      G +VSFLADLGGLYCISIGIF YL+VQFEYRIKKLR EDSV+  IRNR+KAQDHW+K+
Subjt:  NDFSWTK----GGKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G16520.1 unknown protein1.0e-1977.19Show/hide
Query:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV
        G VSFLADLGGLYCISIGIF YL+VQ EYRIKKLR ED+V   IRNR+KA DHW+K+
Subjt:  GKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTEDSVMHSIRNRKKAQDHWNKV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGGTGGCGACAAGGCAAATAGAAGTTCAACGGCGTCATAACAGAGGTGGAGGTAACATGAACAAAGGCGACAATGGCTCGAAAGAAGTGGCGACGGCTGACGA
CATCACAAACTCTGATCTGAGTACGACGGAACAAACAAAGGCGAAGGGGAGCTCCCTGAATGAAACAAGAAATCAACAATGGAACGATTTCTCATGGACGAAAGGTGGTA
AAGTTAGCTTTCTCGCAGATCTTGGTGGTCTATATTGCATTAGTATTGGCATTTTTCTCTACCTCATGGTGCAGTTCGAGTACAGAATTAAAAAGCTGCGCACCGAAGAC
AGTGTTATGCATAGTATTAGAAATAGAAAGAAAGCACAAGACCATTGGAATAAGGTGTTTTTCTTCATCTTTTCCTCTCCTAGAGTTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAGGTGGCGACAAGGCAAATAGAAGTTCAACGGCGTCATAACAGAGGTGGAGGTAACATGAACAAAGGCGACAATGGCTCGAAAGAAGTGGCGACGGCTGACGA
CATCACAAACTCTGATCTGAGTACGACGGAACAAACAAAGGCGAAGGGGAGCTCCCTGAATGAAACAAGAAATCAACAATGGAACGATTTCTCATGGACGAAAGGTGGTA
AAGTTAGCTTTCTCGCAGATCTTGGTGGTCTATATTGCATTAGTATTGGCATTTTTCTCTACCTCATGGTGCAGTTCGAGTACAGAATTAAAAAGCTGCGCACCGAAGAC
AGTGTTATGCATAGTATTAGAAATAGAAAGAAAGCACAAGACCATTGGAATAAGGTGTTTTTCTTCATCTTTTCCTCTCCTAGAGTTATTTGA
Protein sequenceShow/hide protein sequence
MGEVATRQIEVQRRHNRGGGNMNKGDNGSKEVATADDITNSDLSTTEQTKAKGSSLNETRNQQWNDFSWTKGGKVSFLADLGGLYCISIGIFLYLMVQFEYRIKKLRTED
SVMHSIRNRKKAQDHWNKVFFFIFSSPRVI