; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003259 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003259
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNucleolar protein 58-like
Genome locationscaffold4:30496550..30497722
RNA-Seq ExpressionSpg003259
SyntenySpg003259
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG4141194.1 hypothetical protein ERO13_D06G060950v2 [Gossypium hirsutum]8.8e-1042.11Show/hide
Query:  GAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGK-LFSQIQLQCCAKER
        G+QW + K    + +  YLK  AN WL FV    +PT+H ST+S +R+LL+++IL   SI++G II  EIH+Y  KKVG   F  +    C + R
Subjt:  GAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGK-LFSQIQLQCCAKER

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.3e-0837.5Show/hide
Query:  SNEQMNTEVREVGVEGAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKL-FSQ
        + + + T +  V   GA+W +S     T     L   A  W  F+K RLLPTTH  TVS+DR+LL+ S+L   SI++G++I SEI     +K G L F  
Subjt:  SNEQMNTEVREVGVEGAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKL-FSQ

Query:  IQLQCCAKERGP
        +  + C   R P
Subjt:  IQLQCCAKERGP

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.4e-1041.28Show/hide
Query:  APSNEQMNTEVREVGVEGAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKLF-
        A +  ++ T +  V + GA+W +S     T     L   A  W  F+K RLLPTTH  TVS++RVLL++S+L   SI++G+II  EI  Y  +K G LF 
Subjt:  APSNEQMNTEVREVGVEGAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKLF-

Query:  -SQIQLQCC
         S I   CC
Subjt:  -SQIQLQCC

TYH05564.1 hypothetical protein ES288_A08G093000v1 [Gossypium darwinii]2.0e-0939.77Show/hide
Query:  GAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKLFSQIQLQ
        G+QW + K    + +  YLKS A  W  FV+   +P +H ST+S +R+LL+++ILR   I++G+II  EIH+Y  KK G+  +   L+
Subjt:  GAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKLFSQIQLQ

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]7.4e-0939.18Show/hide
Query:  GAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVG-----KLFSQIQLQCCAK
        G+QW + K    + +  YLK  AN W  FV+   +P +H  T+S +R+LL+++IL   SI++GKII  EIHN   KK G      L + + L+ C K
Subjt:  GAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVG-----KLFSQIQLQCCAK

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)1.0e-0839.62Show/hide
Query:  TEVREVGVEGAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKL-FSQIQLQCC
        T +  V V GA+W +S     T     L   A  W  F+K  LLPTTH  TVS+DR+LL+ S+L   SI++G++I SEI     +K G L F  +  + C
Subjt:  TEVREVGVEGAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKL-FSQIQLQCC

Query:  AKERGP
           R P
Subjt:  AKERGP

A0A2P5BCG4 Uncharacterized protein (Fragment)6.1e-0937.5Show/hide
Query:  SNEQMNTEVREVGVEGAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKL-FSQ
        + + + T +  V   GA+W +S     T     L   A  W  F+K RLLPTTH  TVS+DR+LL+ S+L   SI++G++I SEI     +K G L F  
Subjt:  SNEQMNTEVREVGVEGAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKL-FSQ

Query:  IQLQCCAKERGP
        +  + C   R P
Subjt:  IQLQCCAKERGP

A0A2P5CPE8 Uncharacterized protein6.5e-1141.28Show/hide
Query:  APSNEQMNTEVREVGVEGAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKLF-
        A +  ++ T +  V + GA+W +S     T     L   A  W  F+K RLLPTTH  TVS++RVLL++S+L   SI++G+II  EI  Y  +K G LF 
Subjt:  APSNEQMNTEVREVGVEGAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKLF-

Query:  -SQIQLQCC
         S I   CC
Subjt:  -SQIQLQCC

A0A5D2FHZ7 Uncharacterized protein9.5e-1039.77Show/hide
Query:  GAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKLFSQIQLQ
        G+QW + K    + +  YLKS A  W  FV+   +P +H ST+S +R+LL+++ILR   I++G+II  EIH+Y  KK G+  +   L+
Subjt:  GAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKLFSQIQLQ

A0A5D2MA47 Uncharacterized protein3.6e-0939.18Show/hide
Query:  GAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVG-----KLFSQIQLQCCAK
        G+QW + K    + +  YLK  AN W  FV+   +P +H  T+S +R+LL+++IL   SI++GKII  EIHN   KK G      L + + L+ C K
Subjt:  GAQWRLSKTKKRTFQSLYLKSEANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVG-----KLFSQIQLQCCAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCGAAGAAGAAGACTAAGAGAAAGCGGACTCCGCGAAAAGGAAGCACGAAGATTGCGAAAGCAACAAGAGTCGCTAGTCACTGAGGCGATTCAGAAGGTATTGGA
GGATGTTGCTATTAGTGATCTTGCGGAAACAGAACAAGAAGTTGTGAAAAAAGAGACTCCGGAGAAAGAAATCGAGAAAGAGAAAACTCCAGAACCCGTGGAGACTCAAA
TTGAAGCACCTGCAGTTCAAGAAACGAACAAAGAAGTTGAAGAAGTTCCACCCCGTCCTAGGAAGAGAAGAAAACAGAAAAAATCTGTGGAAAAAGAAGTTGTGGAAGTG
AGAGAAAAAGAAAAAGAAGATAAGGGAAAGAGTGTGGTGGAAGAAGAAGAAGAAGAGTCGAATGAGCGATTGCTGTATGAGAAGTTTGTCAATGAGCTTGCTCGAGCAAA
ATATAGAGAGATGCTGAAACAAGATTTTTTGTTGGAGTGTGGTTTTGAAGGTGGTGAGGAGCTACCCCATTTCTTAAGAGCGGTTTTTCATGAAACGGCCATTGCTCCTT
CAAATGAGCAAATGAATACTGAAGTTCGTGAAGTAGGAGTGGAAGGGGCCCAATGGAGGTTATCTAAGACGAAGAAGAGGACATTCCAGTCTCTTTATCTGAAGAGCGAG
GCTAATACGTGGCTAGGATTCGTGAAACTCAGATTGCTACCCACCACCCACGACTCCACTGTCTCCAGAGATAGAGTGCTTCTGGTATTTTCAATTCTACGATCCTTGAG
CATAGATCTTGGTAAGATCATTTCCAGTGAAATCCATAATTACTGGCACAAGAAGGTAGGCAAACTATTTTCCCAAATACAATTACAATGTTGTGCAAAAGAGCGGGGGC
CTGGAATGAGAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCACCGAAGAAGAAGACTAAGAGAAAGCGGACTCCGCGAAAAGGAAGCACGAAGATTGCGAAAGCAACAAGAGTCGCTAGTCACTGAGGCGATTCAGAAGGTATTGGA
GGATGTTGCTATTAGTGATCTTGCGGAAACAGAACAAGAAGTTGTGAAAAAAGAGACTCCGGAGAAAGAAATCGAGAAAGAGAAAACTCCAGAACCCGTGGAGACTCAAA
TTGAAGCACCTGCAGTTCAAGAAACGAACAAAGAAGTTGAAGAAGTTCCACCCCGTCCTAGGAAGAGAAGAAAACAGAAAAAATCTGTGGAAAAAGAAGTTGTGGAAGTG
AGAGAAAAAGAAAAAGAAGATAAGGGAAAGAGTGTGGTGGAAGAAGAAGAAGAAGAGTCGAATGAGCGATTGCTGTATGAGAAGTTTGTCAATGAGCTTGCTCGAGCAAA
ATATAGAGAGATGCTGAAACAAGATTTTTTGTTGGAGTGTGGTTTTGAAGGTGGTGAGGAGCTACCCCATTTCTTAAGAGCGGTTTTTCATGAAACGGCCATTGCTCCTT
CAAATGAGCAAATGAATACTGAAGTTCGTGAAGTAGGAGTGGAAGGGGCCCAATGGAGGTTATCTAAGACGAAGAAGAGGACATTCCAGTCTCTTTATCTGAAGAGCGAG
GCTAATACGTGGCTAGGATTCGTGAAACTCAGATTGCTACCCACCACCCACGACTCCACTGTCTCCAGAGATAGAGTGCTTCTGGTATTTTCAATTCTACGATCCTTGAG
CATAGATCTTGGTAAGATCATTTCCAGTGAAATCCATAATTACTGGCACAAGAAGGTAGGCAAACTATTTTCCCAAATACAATTACAATGTTGTGCAAAAGAGCGGGGGC
CTGGAATGAGAAGATGA
Protein sequenceShow/hide protein sequence
MHRRRRLRESGLREKEARRLRKQQESLVTEAIQKVLEDVAISDLAETEQEVVKKETPEKEIEKEKTPEPVETQIEAPAVQETNKEVEEVPPRPRKRRKQKKSVEKEVVEV
REKEKEDKGKSVVEEEEEESNERLLYEKFVNELARAKYREMLKQDFLLECGFEGGEELPHFLRAVFHETAIAPSNEQMNTEVREVGVEGAQWRLSKTKKRTFQSLYLKSE
ANTWLGFVKLRLLPTTHDSTVSRDRVLLVFSILRSLSIDLGKIISSEIHNYWHKKVGKLFSQIQLQCCAKERGPGMRR