; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003267 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003267
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold4:31433650..31435642
RNA-Seq ExpressionSpg003267
SyntenySpg003267
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69274.1 TatD related DNase [Prunus dulcis]1.5e-0626.03Show/hide
Query:  VRWAAATSEVAGGGGGKGWKLGLDED------GKCPVEKGDFCYLWAR---------TNGLDNRRVKKKGKQLLRANILADKDQFLDFVEFVIGNGRRIK
        VRW   T     GG G G     +E        + P+E      LW R         +NG D +++ K   +     I      FL    F +GNG +I+
Subjt:  VRWAAATSEVAGGGGGKGWKLGLDED------GKCPVEKGDFCYLWAR---------TNGLDNRRVKKKGKQLLRANILADKDQFLDFVEFVIGNGRRIK

Query:  MWEASDVDTTLAKPLFDR------------------------------------KVGNAVNLVEFL-NVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIK
         WE   +   + K LF R                                    ++   V L++ L NV + G+  DR  W+I+   SFS  S    LI 
Subjt:  MWEASDVDTTLAKPLFDR------------------------------------KVGNAVNLVEFL-NVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIK

Query:  REKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR
            + +P    IWK K P K++ F+W  A+  +NT D +QR
Subjt:  REKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR

KAA0059476.1 Transposon TX1 uncharacterized [Cucumis melo var. makuwa]1.4e-1242.86Show/hide
Query:  DTTLAKPLFDRKVGNAVNLVEFLNVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR
        D  L + +FDR++GN + L + L  W+V   +D ++ K++ +  FST ST +KL KR  K+  P+ NLIWK KIP       WSLA+ SLN  + LQR
Subjt:  DTTLAKPLFDRKVGNAVNLVEFLNVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR

KAA0062879.1 DExH-box ATP-dependent RNA helicase DExH10-like [Cucumis melo var. makuwa]4.0e-0742.47Show/hide
Query:  VEFLNVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNT
        V+    W +G  +D ++WK+  +  FST ST +KL K   K+  P+ NLIWK K+P + K+F WS+ + SLNT
Subjt:  VEFLNVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNT

TYK07901.1 DUF21 domain-containing protein [Cucumis melo var. makuwa]5.0e-1041.38Show/hide
Query:  KVGNAVNLVEFLNVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR
        ++ N   ++E L  W   +D+D +KW ++   SF+  ST +KL K    +  P+   IWK KI K+VK FLWSLA+ SLNTH  +Q+
Subjt:  KVGNAVNLVEFLNVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR

VVA30963.1 Hypothetical predicted protein, partial [Prunus dulcis]1.2e-0625.62Show/hide
Query:  VRWAAATSEVAGGGGGKGWKLGLDED------GKCPVEKGDFCYLWAR---------TNGLDNRRVKKKGKQLLRANILADKDQFLDFVEFVIGNGRRIK
        VRW   T     GG G G     +E        + P+E      LW R         +NG D +++ K   +     I    + FL    F +GNG +I+
Subjt:  VRWAAATSEVAGGGGGKGWKLGLDED------GKCPVEKGDFCYLWAR---------TNGLDNRRVKKKGKQLLRANILADKDQFLDFVEFVIGNGRRIK

Query:  MWEASDVDTTLAKPLFDR------------------------------------KVGNAVNLVEFL-NVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIK
         WE   +   + K LF R                                    ++   V L++ L NV + G+  DR  W+I+   SFS  S    L+ 
Subjt:  MWEASDVDTTLAKPLFDR------------------------------------KVGNAVNLVEFL-NVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIK

Query:  REKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR
          + + +P  + IWK K P K++ F+W  A+  +NT D +QR
Subjt:  REKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR

TrEMBL top hitse value%identityAlignment
A0A5D3BWG7 Transposon TX1 uncharacterized6.8e-1342.86Show/hide
Query:  DTTLAKPLFDRKVGNAVNLVEFLNVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR
        D  L + +FDR++GN + L + L  W+V   +D ++ K++ +  FST ST +KL KR  K+  P+ NLIWK KIP       WSLA+ SLN  + LQR
Subjt:  DTTLAKPLFDRKVGNAVNLVEFLNVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR

A0A5D3C7R2 DUF21 domain-containing protein2.4e-1041.38Show/hide
Query:  KVGNAVNLVEFLNVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR
        ++ N   ++E L  W   +D+D +KW ++   SF+  ST +KL K    +  P+   IWK KI K+VK FLWSLA+ SLNTH  +Q+
Subjt:  KVGNAVNLVEFLNVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR

A0A5D3DFZ0 DExH-box ATP-dependent RNA helicase DExH10-like1.9e-0742.47Show/hide
Query:  VEFLNVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNT
        V+    W +G  +D ++WK+  +  FST ST +KL K   K+  P+ NLIWK K+P + K+F WS+ + SLNT
Subjt:  VEFLNVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNT

M5XHS0 Reverse transcriptase domain-containing protein (Fragment)3.5e-0927.35Show/hide
Query:  VRWAAATSEVAGGGGGKGWKLGLDED------GKCPVEKGDFCYLWAR---------TNGLDNRRVKKKGKQLLRANILADKDQFLDFVEFVIGNGRRIK
        VRW   T     GG G G     +E        + P+E      LW R         +NG D +++ K   +     I    + FL    F +GNG +I+
Subjt:  VRWAAATSEVAGGGGGKGWKLGLDED------GKCPVEKGDFCYLWAR---------TNGLDNRRVKKKGKQLLRANILADKDQFLDFVEFVIGNGRRIK

Query:  MWEASDVDTTLAKPLFDR-----------------KVGNAVNLVEFL-NVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIP
         WE   +   + K LF R                 ++   V L++ L NV + G+  DR  W+++   SFS  S    L+   + + +P  + IWK K P
Subjt:  MWEASDVDTTLAKPLFDR-----------------KVGNAVNLVEFL-NVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIP

Query:  KKVKVFLWSLAHTSLNTHDMLQR
         K++ F+W  A+  +NT D +QR
Subjt:  KKVKVFLWSLAHTSLNTHDMLQR

M5XV38 zf-RVT domain-containing protein1.9e-0725.62Show/hide
Query:  VRWAAATSEVAGGGGGKGWKLGLDED------GKCPVEKGDFCYLWAR---------TNGLDNRRVKKKGKQLLRANILADKDQFLDFVEFVIGNGRRIK
        VRW   T     GG G G     +E        + P+E      LW R         +NG D +R+ K   +     I    + FL    F +GNG +I+
Subjt:  VRWAAATSEVAGGGGGKGWKLGLDED------GKCPVEKGDFCYLWAR---------TNGLDNRRVKKKGKQLLRANILADKDQFLDFVEFVIGNGRRIK

Query:  MWEASDVDTTLAKPLFDR------------------------------------KVGNAVNLVEFL-NVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIK
         WE   +   + K LF R                                    ++   V L++ L NV + G+  DR  W+++   SFS  S    L+ 
Subjt:  MWEASDVDTTLAKPLFDR------------------------------------KVGNAVNLVEFL-NVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIK

Query:  REKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR
          + + +P  + IWK K P K++ F+W  A+  +NT D +QR
Subjt:  REKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDMLQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCAGACTGGAAGAAGAGTGCGTCGTTTGAAGTTGGCGGCGAGGGTTTCGGTTGACGGTGAAGGTTCTGATTGGGTGGTTCGCGGTGAGGGTCGGGTTCGATGGGC
GGCGGCAACGTCTGAAGTGGCTGGTGGTGGCGGCGGCAAAGGCTGGAAGCTAGGGTTAGATGAGGATGGAAAATGCCCTGTAGAGAAGGGTGATTTTTGCTATTTATGGG
CTAGAACAAATGGGTTGGACAACAGAAGGGTTAAAAAGAAAGGAAAACAGCTGCTGCGGGCTAACATCTTGGCGGATAAAGATCAATTTCTTGATTTTGTTGAGTTTGTG
ATAGGAAATGGAAGAAGAATCAAAATGTGGGAAGCATCTGATGTGGACACGACTTTGGCAAAGCCGCTCTTTGACAGAAAGGTGGGGAATGCGGTCAACCTTGTTGAATT
TCTTAACGTGTGGATAGTGGGAAATGATCAAGATAGAATAAAGTGGAAGATTGACCCGACATGCTCTTTTAGTACAAATTCTACCATTATGAAGCTGATTAAGAGGGAGA
AGAAAATGACTTACCCAATGGAGAACCTAATTTGGAAATTCAAGATTCCAAAGAAGGTTAAGGTCTTCTTATGGTCATTAGCTCATACAAGCCTCAACACTCACGACATG
CTTCAAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTCAGACTGGAAGAAGAGTGCGTCGTTTGAAGTTGGCGGCGAGGGTTTCGGTTGACGGTGAAGGTTCTGATTGGGTGGTTCGCGGTGAGGGTCGGGTTCGATGGGC
GGCGGCAACGTCTGAAGTGGCTGGTGGTGGCGGCGGCAAAGGCTGGAAGCTAGGGTTAGATGAGGATGGAAAATGCCCTGTAGAGAAGGGTGATTTTTGCTATTTATGGG
CTAGAACAAATGGGTTGGACAACAGAAGGGTTAAAAAGAAAGGAAAACAGCTGCTGCGGGCTAACATCTTGGCGGATAAAGATCAATTTCTTGATTTTGTTGAGTTTGTG
ATAGGAAATGGAAGAAGAATCAAAATGTGGGAAGCATCTGATGTGGACACGACTTTGGCAAAGCCGCTCTTTGACAGAAAGGTGGGGAATGCGGTCAACCTTGTTGAATT
TCTTAACGTGTGGATAGTGGGAAATGATCAAGATAGAATAAAGTGGAAGATTGACCCGACATGCTCTTTTAGTACAAATTCTACCATTATGAAGCTGATTAAGAGGGAGA
AGAAAATGACTTACCCAATGGAGAACCTAATTTGGAAATTCAAGATTCCAAAGAAGGTTAAGGTCTTCTTATGGTCATTAGCTCATACAAGCCTCAACACTCACGACATG
CTTCAAAGATAG
Protein sequenceShow/hide protein sequence
MTQTGRRVRRLKLAARVSVDGEGSDWVVRGEGRVRWAAATSEVAGGGGGKGWKLGLDEDGKCPVEKGDFCYLWARTNGLDNRRVKKKGKQLLRANILADKDQFLDFVEFV
IGNGRRIKMWEASDVDTTLAKPLFDRKVGNAVNLVEFLNVWIVGNDQDRIKWKIDPTCSFSTNSTIMKLIKREKKMTYPMENLIWKFKIPKKVKVFLWSLAHTSLNTHDM
LQR