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Spg003270 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003270
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCyclin-H1-1
Genome locationscaffold4:44467384..44469036
RNA-Seq ExpressionSpg003270
SyntenySpg003270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150791.1 uncharacterized protein LOC111018854 [Momordica charantia]3.8e-3576.85Show/hide
Query:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI
        MA+FVS+SFSVPQ +LK  EM P KL KV  VSSRAITGTASKLVLSCCSNKS+S   R+ HPLRVTSRPF G+VSFSS + V+ GYW+GPDVDDGWGYI
Subjt:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI

Query:  EAFIDRIT
        EAFIDRIT
Subjt:  EAFIDRIT

XP_022946526.1 uncharacterized protein LOC111450562 [Cucurbita moschata]6.5e-3577.78Show/hide
Query:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI
        MASFVSLSFSVPQ I K  EMPP KL KVTVV  RA  GTASK VLSCC+NKS+S N  NCHP+R+TSRPF GIVS SS ++VLAGYWVGPDVDDGWGYI
Subjt:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI

Query:  EAFIDRIT
        EAF+DRIT
Subjt:  EAFIDRIT

XP_022999037.1 uncharacterized protein LOC111493548 [Cucurbita maxima]1.4e-3476.85Show/hide
Query:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI
        MASFVSLSFSVPQ I K  EMPP KL KVTVV  RA  GTASK VLSCCSNKS+S N  NC P+R+TSRPF GIVS SS ++VLAGYWVGPDVDDGWGYI
Subjt:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI

Query:  EAFIDRIT
        EA +DRIT
Subjt:  EAFIDRIT

XP_023545344.1 uncharacterized protein LOC111804783 isoform X1 [Cucurbita pepo subsp. pepo]7.7e-3677.78Show/hide
Query:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI
        MASFVSLSFSVPQ I K  EMPP KL KVTVV  RA  GTAS  VLSCCSNKS+S N  NCHP+R+TSRPF GIVS SS ++VLAGYWVGPDVDDGWGYI
Subjt:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI

Query:  EAFIDRIT
        EAF+DRIT
Subjt:  EAFIDRIT

XP_038890542.1 uncharacterized protein LOC120080060 [Benincasa hispida]2.9e-3577.98Show/hide
Query:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMV-LAGYWVGPDVDDGWGY
        MA+FVSLSFSVPQP LK  E+PP KL +VTVVSSRA  GTASKLVLSCCSN S+S N +NCHP+R+T RPF GIVS SS +MV L+GYWVGPDVDDGWGY
Subjt:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMV-LAGYWVGPDVDDGWGY

Query:  IEAFIDRIT
        IEAFIDRIT
Subjt:  IEAFIDRIT

TrEMBL top hitse value%identityAlignment
A0A5A7U1B8 Uncharacterized protein1.2e-2973.39Show/hide
Query:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMV-LAGYWVGPDVDDGWGY
        MASFVSLSFSVPQ  LK  E+PP KL K TVVS RA  GTASKLVL C S KS+S N  N   +R+TSRPF GIVS SS +MV L GYWVGPDVDDGWGY
Subjt:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMV-LAGYWVGPDVDDGWGY

Query:  IEAFIDRIT
        IEAFIDRIT
Subjt:  IEAFIDRIT

A0A5D3CPK7 Uncharacterized protein5.7e-2972.48Show/hide
Query:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMV-LAGYWVGPDVDDGWGY
        MASFVSLSFSVPQ  LK  E+PP KL K TVVS RA  GTA KLVL C S KS+S N  N   +R+TSRPF GIVS SS +MV L GYWVGPDVDDGWGY
Subjt:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMV-LAGYWVGPDVDDGWGY

Query:  IEAFIDRIT
        IEAFIDRIT
Subjt:  IEAFIDRIT

A0A6J1DCK5 uncharacterized protein LOC1110188541.8e-3576.85Show/hide
Query:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI
        MA+FVS+SFSVPQ +LK  EM P KL KV  VSSRAITGTASKLVLSCCSNKS+S   R+ HPLRVTSRPF G+VSFSS + V+ GYW+GPDVDDGWGYI
Subjt:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI

Query:  EAFIDRIT
        EAFIDRIT
Subjt:  EAFIDRIT

A0A6J1G3X3 uncharacterized protein LOC1114505623.1e-3577.78Show/hide
Query:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI
        MASFVSLSFSVPQ I K  EMPP KL KVTVV  RA  GTASK VLSCC+NKS+S N  NCHP+R+TSRPF GIVS SS ++VLAGYWVGPDVDDGWGYI
Subjt:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI

Query:  EAFIDRIT
        EAF+DRIT
Subjt:  EAFIDRIT

A0A6J1K9Q0 uncharacterized protein LOC1114935487.0e-3576.85Show/hide
Query:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI
        MASFVSLSFSVPQ I K  EMPP KL KVTVV  RA  GTASK VLSCCSNKS+S N  NC P+R+TSRPF GIVS SS ++VLAGYWVGPDVDDGWGYI
Subjt:  MASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGIVSFSSGSMVLAGYWVGPDVDDGWGYI

Query:  EAFIDRIT
        EA +DRIT
Subjt:  EAFIDRIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAGTCGACTCTGGAACTTGGAAGGGCTGCTCTTCTCGTCCTTTTTAAAAGGAGCCGCGGCAAAGCCAAAAACCTTGGGGTTTTGGAATTCGTAGTTGCTTTCAT
GGCGAGCTTCGTTTCCCTGAGCTTCTCCGTTCCGCAGCCCATTCTCAAGCGTCAGGAAATGCCCCCATCGAAACTTGTCAAAGTTACAGTAGTTTCAAGCCGAGCAATTA
CTGGAACAGCTTCGAAGCTTGTGCTATCCTGTTGCTCAAATAAATCCGTATCTAAGAATGGGAGAAATTGCCATCCTTTGCGGGTAACTTCAAGACCTTTTTTGGGAATA
GTTTCTTTTAGTTCCGGGAGTATGGTATTAGCTGGCTATTGGGTAGGACCTGATGTTGATGACGGTTGGGGATATATAGAAGCTTTTATTGATCGGATTACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAGTCGACTCTGGAACTTGGAAGGGCTGCTCTTCTCGTCCTTTTTAAAAGGAGCCGCGGCAAAGCCAAAAACCTTGGGGTTTTGGAATTCGTAGTTGCTTTCAT
GGCGAGCTTCGTTTCCCTGAGCTTCTCCGTTCCGCAGCCCATTCTCAAGCGTCAGGAAATGCCCCCATCGAAACTTGTCAAAGTTACAGTAGTTTCAAGCCGAGCAATTA
CTGGAACAGCTTCGAAGCTTGTGCTATCCTGTTGCTCAAATAAATCCGTATCTAAGAATGGGAGAAATTGCCATCCTTTGCGGGTAACTTCAAGACCTTTTTTGGGAATA
GTTTCTTTTAGTTCCGGGAGTATGGTATTAGCTGGCTATTGGGTAGGACCTGATGTTGATGACGGTTGGGGATATATAGAAGCTTTTATTGATCGGATTACTTAA
Protein sequenceShow/hide protein sequence
MKESTLELGRAALLVLFKRSRGKAKNLGVLEFVVAFMASFVSLSFSVPQPILKRQEMPPSKLVKVTVVSSRAITGTASKLVLSCCSNKSVSKNGRNCHPLRVTSRPFLGI
VSFSSGSMVLAGYWVGPDVDDGWGYIEAFIDRIT