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Spg003273 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003273
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationscaffold4:46220629..46222193
RNA-Seq ExpressionSpg003273
SyntenySpg003273
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599313.1 Wound-induced protein WIN1, partial [Cucurbita argyrosperma subsp. sororia]2.2e-6786.71Show/hide
Query:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT
        METKG ML+ L CLC+V+ +SKAQS SNVRATFNLYNAP+INWD NAVSAFCSTWDA+QPLEWRSQYGWTAFCGPVGPQG+DSCG CLLVTN ETGAQQT
Subjt:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT

Query:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        VRIVD+C+NGGLDLDVGVF+SLDTDGNGNANGFLTV+YDFVNC
Subjt:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

XP_022143020.1 pathogenesis-related protein PR-4-like [Momordica charantia]4.9e-6784.83Show/hide
Query:  METKGSML--VMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQ
        METK   +  +++LC C+VI +S+ QSGSNVRAT+NLYNAPQINWDLNAVSAFC+TWDANQPLEWRSQYGWTAFCGPVGP GQDSCGQCLLVTN ETGAQ
Subjt:  METKGSML--VMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQ

Query:  QTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        QTVRIVD+C NGGLDLDVGVFQSLDT+GNGNANGFLTVNYDFVNC
Subjt:  QTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

XP_022946139.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]2.9e-6787.41Show/hide
Query:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT
        METKG ML+ L CLC+V+ +SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA+QPLEWRSQYGWTAFCGPVGPQG+DSCG CLLVTN ETGAQQ 
Subjt:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT

Query:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        VRIVD+C+NGGLDLDVGVFQSLDTDGNGNANGFLTV+YDFVNC
Subjt:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

XP_022999104.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]2.9e-6787.41Show/hide
Query:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT
        METKG ML+ L CLC+V+ +SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA+QPLEWRSQYGWTAFCGPVGPQGQDSCG CLLVTN ETGAQQT
Subjt:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT

Query:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        VRIVD+C+NGGLDLDVGVFQSLDTDGNGNANGFL V+YDFV C
Subjt:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

XP_023521170.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo]3.7e-6786.71Show/hide
Query:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT
        METKG ML+ L CLC V+ +SKAQS SNVRATFN YNAP+INWDLNAVSAFCSTWDA+QPLEWRSQYGWTAFCGPVGPQG+DSCG CLLVTN ET AQQT
Subjt:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT

Query:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        VRIVD+C+NGGLDLDVGVFQSLDTDGNGNANGFLT+NYDFVNC
Subjt:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LG74 Barwin domain-containing protein1.0e-6291.94Show/hide
Query:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVF
        MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGP+GP GQ SCG CLLVTN++TGAQQTVRIVD+C NGGLDLDVGVF
Subjt:  MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVF

Query:  QSLDTDGNGNANGFLTVNYDFVNC
        QSLDTDGNG ANGFLT+NYDFVNC
Subjt:  QSLDTDGNGNANGFLTVNYDFVNC

A0A5D3D4F5 Pathogenesis-related protein PR-4-like4.0e-6786.11Show/hide
Query:  METKGSM-LVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQ
        MET+  +  VMLLC C+V+ MSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDAN+PLEWRSQYGWTAFCGP+GP GQDSCG CLLVTN++TG Q+
Subjt:  METKGSM-LVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQ

Query:  TVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        TVRIVD+C NGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
Subjt:  TVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

A0A6J1CMK0 pathogenesis-related protein PR-4-like2.4e-6784.83Show/hide
Query:  METKGSML--VMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQ
        METK   +  +++LC C+VI +S+ QSGSNVRAT+NLYNAPQINWDLNAVSAFC+TWDANQPLEWRSQYGWTAFCGPVGP GQDSCGQCLLVTN ETGAQ
Subjt:  METKGSML--VMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQ

Query:  QTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        QTVRIVD+C NGGLDLDVGVFQSLDT+GNGNANGFLTVNYDFVNC
Subjt:  QTVRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

A0A6J1G2Y5 pathogenesis-related protein PR-4-like1.4e-6787.41Show/hide
Query:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT
        METKG ML+ L CLC+V+ +SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA+QPLEWRSQYGWTAFCGPVGPQG+DSCG CLLVTN ETGAQQ 
Subjt:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT

Query:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        VRIVD+C+NGGLDLDVGVFQSLDTDGNGNANGFLTV+YDFVNC
Subjt:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

A0A6J1KG47 pathogenesis-related protein PR-4-like1.4e-6787.41Show/hide
Query:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT
        METKG ML+ L CLC+V+ +SKAQS SNVRATFNLYNAP+INWDLNAVSAFCSTWDA+QPLEWRSQYGWTAFCGPVGPQGQDSCG CLLVTN ETGAQQT
Subjt:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT

Query:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        VRIVD+C+NGGLDLDVGVFQSLDTDGNGNANGFL V+YDFV C
Subjt:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN15.6e-5068.8Show/hide
Query:  TMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGV
        T + + S  NVRAT+++YN   + WDLNAVSA+CSTWDAN+PL WR +YGWTAFCGPVGP+G+DSCG+CL VTN  TGAQ TVRIVD+C NGGLDLDV V
Subjt:  TMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGV

Query:  FQSLDTDGNGNANGFLTVNYDFVNC
        F+ +DTDGNGN  G L VNY FV+C
Subjt:  FQSLDTDGNGNANGFLTVNYDFVNC

P09762 Wound-induced protein WIN21.6e-4971.43Show/hide
Query:  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDT
        S  NVRAT+++YN   + WDLNAVSA+CSTWDAN+P  WRS+YGWTAFCGPVGP+G+DSCG+CL VTN  TGAQ TVRIVD+C NGGLDLD+ VFQ +DT
Subjt:  SGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLDT

Query:  DGNGNANGFLTVNYDFVNC
        DG GN  G L VNY FVNC
Subjt:  DGNGNANGFLTVNYDFVNC

P29062 Pathogenesis-related protein PR-4A4.3e-5065.69Show/hide
Query:  MLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDK
        + V LL + +V+ M+ AQS +NVR+T++LYN   INWDL A SAFC+TWDA++PL WR +YGWTAFCGP GP+GQDSCG+CL VTN  TG Q TVRIVD+
Subjt:  MLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDK

Query:  CDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        C NGGLDLDV VF  LDT+G G   G LTVNY+FVNC
Subjt:  CDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

P29063 Pathogenesis-related protein PR-4B2.1e-4964.96Show/hide
Query:  MLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDK
        + V LL + V++ M+ AQS +NVR+T++LYN   INWDL A SAFC+TWDA++PL WR +YGWTAFCGP GP+GQDSCG+CL VTN  TG Q TVRIVD+
Subjt:  MLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDK

Query:  CDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        C NGGLDLDV VF  LDT+G G   G L VNY+FVNC
Subjt:  CDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

P32045 Pathogenesis-related protein P21.0e-4659.44Show/hide
Query:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT
        ME    + V    + +++ ++ AQS +NVRAT++LYN   INWDL   S +C+TWDA++PLEWR +YGWTAFCGP GP GQ SCG+CL VTN  TG Q+T
Subjt:  METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQT

Query:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC
        VRIVD+C NGGLDLDV VF  LDT+G G   G L VNY+FVNC
Subjt:  VRIVDKCDNGGLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 42.1e-4465Show/hide
Query:  QSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLD
        +S SNVRAT++ YN  Q NWDL AVSA+CSTWDA++P  WRS+YGWTAFCGP GP+GQ SCG+CL V N  T A  TVRIVD+C NGGLDLDV +F  +D
Subjt:  QSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDKCDNGGLDLDVGVFQSLD

Query:  TDGNGNANGFLTVNYDFVNC
        TDG G   G L V+Y FV+C
Subjt:  TDGNGNANGFLTVNYDFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACAAAAGGTTCGATGTTGGTAATGTTGTTGTGTTTGTGTGTTGTAATTACGATGTCCAAAGCTCAAAGTGGAAGCAATGTGAGAGCAACGTTTAACTTGTACAA
TGCTCCACAAATCAATTGGGATTTGAATGCAGTGAGTGCATTTTGTTCGACATGGGATGCCAATCAGCCTTTGGAGTGGCGCAGCCAATATGGATGGACTGCCTTTTGTG
GCCCTGTTGGACCTCAAGGCCAAGATTCTTGTGGCCAATGTTTACTGGTGACAAACATTGAAACAGGTGCACAACAAACCGTGAGAATTGTGGATAAATGTGATAATGGA
GGACTAGATTTGGATGTTGGAGTGTTCCAAAGTCTCGACACTGATGGAAATGGCAATGCTAATGGCTTTCTAACAGTCAACTATGATTTTGTCAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACAAAAGGTTCGATGTTGGTAATGTTGTTGTGTTTGTGTGTTGTAATTACGATGTCCAAAGCTCAAAGTGGAAGCAATGTGAGAGCAACGTTTAACTTGTACAA
TGCTCCACAAATCAATTGGGATTTGAATGCAGTGAGTGCATTTTGTTCGACATGGGATGCCAATCAGCCTTTGGAGTGGCGCAGCCAATATGGATGGACTGCCTTTTGTG
GCCCTGTTGGACCTCAAGGCCAAGATTCTTGTGGCCAATGTTTACTGGTGACAAACATTGAAACAGGTGCACAACAAACCGTGAGAATTGTGGATAAATGTGATAATGGA
GGACTAGATTTGGATGTTGGAGTGTTCCAAAGTCTCGACACTGATGGAAATGGCAATGCTAATGGCTTTCTAACAGTCAACTATGATTTTGTCAATTGTTGA
Protein sequenceShow/hide protein sequence
METKGSMLVMLLCLCVVITMSKAQSGSNVRATFNLYNAPQINWDLNAVSAFCSTWDANQPLEWRSQYGWTAFCGPVGPQGQDSCGQCLLVTNIETGAQQTVRIVDKCDNG
GLDLDVGVFQSLDTDGNGNANGFLTVNYDFVNC