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Spg003282 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003282
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMitochondrial import inner membrane translocase subunit TIM22-4-like
Genome locationscaffold4:45535551..45537724
RNA-Seq ExpressionSpg003282
SyntenySpg003282
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039024.1 uncharacterized protein E6C27_scaffold84G001110 [Cucumis melo var. makuwa]1.4e-0659.52Show/hide
Query:  RRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVIWKVK
        RRD R W+PNP+ GFSC+SFL  ++NPS A E +FS++W+VK
Subjt:  RRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVIWKVK

KAA0043240.1 zinc finger protein ZPR1-like [Cucumis melo var. makuwa]6.7e-0643.84Show/hide
Query:  LTDRETMDVLALLSLLGGVTFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVIWKVKAKEGAVF
        LT+RE   V +LLSLL G  F   RRD R W+PNP      +S    LL+PS   ES+F V+W+ K  +   F
Subjt:  LTDRETMDVLALLSLLGGVTFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVIWKVKAKEGAVF

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]1.3e-0948.48Show/hide
Query:  LTDRETMDVLALLSLLGGVTFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVIWKVK
        L+DRET +V+AL+SLL   +F   RRD   W+P P+ GF C+SF  CL+N +   ES+ S+IW++K
Subjt:  LTDRETMDVLALLSLLGGVTFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVIWKVK

TYK13538.1 uncharacterized protein E5676_scaffold299G00110 [Cucumis melo var. makuwa]1.0e-0649.15Show/hide
Query:  LTDRETMDVLALLSLLGGVTFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIF
        LT+RETM+V + LSL+ G  F   R+D R W+PNP   ++C+S +  LL+PS  +ESIF
Subjt:  LTDRETMDVLALLSLLGGVTFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIF

TYK21752.1 uncharacterized protein E5676_scaffold859G001270 [Cucumis melo var. makuwa]5.2e-0648.44Show/hide
Query:  LTDRETMDVLALLSLLGGV--TFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVI
        LT+RET +V +LLSLL G    F   R D R WNPNP  G++C+S    LL+ +  +ESIF V+
Subjt:  LTDRETMDVLALLSLLGGV--TFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVI

TrEMBL top hitse value%identityAlignment
A0A5A7T6A8 Uncharacterized protein6.6e-0759.52Show/hide
Query:  RRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVIWKVK
        RRD R W+PNP+ GFSC+SFL  ++NPS A E +FS++W+VK
Subjt:  RRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVIWKVK

A0A5A7TIU4 Zinc finger protein ZPR1-like3.3e-0643.84Show/hide
Query:  LTDRETMDVLALLSLLGGVTFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVIWKVKAKEGAVF
        LT+RE   V +LLSLL G  F   RRD R W+PNP      +S    LL+PS   ES+F V+W+ K  +   F
Subjt:  LTDRETMDVLALLSLLGGVTFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVIWKVKAKEGAVF

A0A5D3CI74 Calpain-type cysteine protease DEK16.3e-1048.48Show/hide
Query:  LTDRETMDVLALLSLLGGVTFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVIWKVK
        L+DRET +V+AL+SLL   +F   RRD   W+P P+ GF C+SF  CL+N +   ES+ S+IW++K
Subjt:  LTDRETMDVLALLSLLGGVTFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVIWKVK

A0A5D3CQR3 Uncharacterized protein5.0e-0749.15Show/hide
Query:  LTDRETMDVLALLSLLGGVTFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIF
        LT+RETM+V + LSL+ G  F   R+D R W+PNP   ++C+S +  LL+PS  +ESIF
Subjt:  LTDRETMDVLALLSLLGGVTFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIF

A0A5D3DDU2 Uncharacterized protein2.5e-0648.44Show/hide
Query:  LTDRETMDVLALLSLLGGV--TFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVI
        LT+RET +V +LLSLL G    F   R D R WNPNP  G++C+S    LL+ +  +ESIF V+
Subjt:  LTDRETMDVLALLSLLGGV--TFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAACTGATAGGGAAACTATGGATGTCCTGGCTCTCCTTTCTCTGTTAGGGGGAGTCACCTTTATACCAAATAGGAGGGATTTCCGTTCGTGGAACCCTAACCCAAT
CCATGGCTTCTCTTGTCGCTCCTTTCTTCATTGCCTTCTGAATCCTTCTTCAGCCGAGGAGTCTATCTTTTCTGTGATATGGAAGGTGAAAGCCAAAGAAGGTGCAGTTT
TTCATCGGGCAGTTCGGTATGGGACGTGTTCTTTGAGATGTTTGACCTGCAGTATGCTAGACACAGGAGAAGATGATCAAGGAGTTCCTTCCCCATCTGCCTTTCTATCT
GAGATTGAATGGAGTGCGGTCACGAACCCTAAGCGATTCAGGTCCGGTCCGTTTCAGAGGGTTGTCACTGCTGGAACACGGAAACCACGGCTGGAGCAGGGGAAACGCCG
GTTTGTGCACTGCCGCAAGGTGTTCGCGCCACCGGAGTTGAAACGCCCACAGAACTGGTGTCCGTTCGTCGTGGGTGCAGCGTTGTCTAGCTTCGGTCGGGGATCTGAAC
CTTGTGTCCCTAAATACCCAGAAAAATTTCACTACTCTTCTTCAGCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAACTGATAGGGAAACTATGGATGTCCTGGCTCTCCTTTCTCTGTTAGGGGGAGTCACCTTTATACCAAATAGGAGGGATTTCCGTTCGTGGAACCCTAACCCAAT
CCATGGCTTCTCTTGTCGCTCCTTTCTTCATTGCCTTCTGAATCCTTCTTCAGCCGAGGAGTCTATCTTTTCTGTGATATGGAAGGTGAAAGCCAAAGAAGGTGCAGTTT
TTCATCGGGCAGTTCGGTATGGGACGTGTTCTTTGAGATGTTTGACCTGCAGTATGCTAGACACAGGAGAAGATGATCAAGGAGTTCCTTCCCCATCTGCCTTTCTATCT
GAGATTGAATGGAGTGCGGTCACGAACCCTAAGCGATTCAGGTCCGGTCCGTTTCAGAGGGTTGTCACTGCTGGAACACGGAAACCACGGCTGGAGCAGGGGAAACGCCG
GTTTGTGCACTGCCGCAAGGTGTTCGCGCCACCGGAGTTGAAACGCCCACAGAACTGGTGTCCGTTCGTCGTGGGTGCAGCGTTGTCTAGCTTCGGTCGGGGATCTGAAC
CTTGTGTCCCTAAATACCCAGAAAAATTTCACTACTCTTCTTCAGCAAAATGA
Protein sequenceShow/hide protein sequence
MLTDRETMDVLALLSLLGGVTFIPNRRDFRSWNPNPIHGFSCRSFLHCLLNPSSAEESIFSVIWKVKAKEGAVFHRAVRYGTCSLRCLTCSMLDTGEDDQGVPSPSAFLS
EIEWSAVTNPKRFRSGPFQRVVTAGTRKPRLEQGKRRFVHCRKVFAPPELKRPQNWCPFVVGAALSSFGRGSEPCVPKYPEKFHYSSSAK