; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003344 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003344
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:49243757..49268023
RNA-Seq ExpressionSpg003344
SyntenySpg003344
Gene Ontology termsNA
InterPro domainsIPR025313 - Domain of unknown function DUF4217
IPR025558 - Domain of unknown function DUF4283
IPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBN69274.1 TatD related DNase [Prunus dulcis]2.1e-4333.7Show/hide
Query:  WHQRCV----RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEG-----------------------------------SRAKY---YNSNLS
        W + C+    R TL QAVLSS+P YY+SLFK+P  V   +++L+R+F WEG                                    RAK+   +    +
Subjt:  WHQRCV----RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEG-----------------------------------SRAKY---YNSNLS

Query:  SVWPSIIQ----------------RSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQ----T
        S+W  II+                + S ++PWR IS          + S+GNG    FW D WL  GIL   FPRLY L+ R    +   W A+      
Subjt:  SVWPSIIQ----------------RSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQ----T

Query:  AWDLSLMRNLNDLETEEWVELSLILSSISL-QNRNDSWSWPLESSNIFSVKSLMKDLVDYPVIEDNLYKIIWTDSYPKKIKIFLWELSHGAINTADRLQR
         WD    RNL++ E  E V L  IL ++ L  +R D  SW +E    FS KS    L+    +    Y+ IW    P KI+ F+W  ++G INT D +QR
Subjt:  AWDLSLMRNLNDLETEEWVELSLILSSISL-QNRNDSWSWPLESSNIFSVKSLMKDLVDYPVIEDNLYKIIWTDSYPKKIKIFLWELSHGAINTADRLQR

Query:  RMPHFHLSPSWCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDVLTL
        R P   LSPSWC+ C   +E+  HLF+HCS + + W  +LDA G   V P    ++L++
Subjt:  RMPHFHLSPSWCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDVLTL

KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.9e-4029.38Show/hide
Query:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEGSR-------------------------------------------------------AK
        R TL  + L S+PIY +S+FK+P+ +A+ ++   R+F W G+                                                        +K
Subjt:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEGSR-------------------------------------------------------AK

Query:  YYNSNLSSVWPSIIQRSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLNDL
        Y    + S +PS  + SS+ SPW+ ++  +   Y      + +G   SFW D+W     L+   PRL+ L+   +  V E W  S   W L + R L D 
Subjt:  YYNSNLSSVWPSIIQRSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLNDL

Query:  ETEEWVELSLILSSISLQNRNDSWSWPLESSNIFSVKSLMKDLVDYPV----IEDNLYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS
        E   W  +   L +      +    W L S+NIF   S+ + + + P+       NLYK +W   +PKK K F+W L HG INTADRLQ+R+P++ LSP+
Subjt:  ETEEWVELSLILSSISLQNRNDSWSWPLESSNIFSVKSLMKDLVDYPV----IEDNLYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS

Query:  WCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWST
        WC MC    E   HLF+HC  + + WS+      W++
Subjt:  WCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWST

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]8.4e-4030.06Show/hide
Query:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEGSRAKY------------------------------------------------------
        R TL  + L S+PIY LS+FK+P+ +A+ ++   R+F W G+   +                                                      
Subjt:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEGSRAKY------------------------------------------------------

Query:  YNSNLSSVWPSIIQRSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLNDLE
        Y+      +PS  + SS+ SPW+ +++ +   Y      + +G   SFW D+W     L+   PRL+ L+   +  V + W  S   W++ + R L D E
Subjt:  YNSNLSSVWPSIIQRSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLNDLE

Query:  TEEWVELSLILSSISLQNRNDSWS-WPLESSNIFSVKSLMKDLVDYPVIEDN----LYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS
           W  +   L +  L +R  S   W L S+NIF   S+ KDL +      N    LYK +W   +PKK K F+W L HG INTADRLQ+R+P++ LSP+
Subjt:  TEEWVELSLILSSISLQNRNDSWS-WPLESSNIFSVKSLMKDLVDYPVIEDN----LYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS

Query:  WCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDV
        WC MC    E   HLF+HC  + + WS+      W++  PN +K +
Subjt:  WCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDV

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.5e-4030.06Show/hide
Query:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEGSRAKY------------------------------------------------------
        R TL  + L S+PIY LS+FK+P+ +A+ ++   R+F W G+   +                                                      
Subjt:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEGSRAKY------------------------------------------------------

Query:  YNSNLSSVWPSIIQRSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLNDLE
        Y+      +PS  + SS+ SPW+ +++ +   Y      + +G   SFW D+W     L+   PRL+ L+   +  V + W  S   W++ + R L D E
Subjt:  YNSNLSSVWPSIIQRSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLNDLE

Query:  TEEWVELSLILSSISLQNRNDSWS-WPLESSNIFSVKSLMKDLVDYPVIEDN----LYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS
           W  +   L +  L +R  S   W L S+NIF   S+ KDL +      N    LYK +W   +PKK K F+W L HG INTADRLQ+R+P++ LSP+
Subjt:  TEEWVELSLILSSISLQNRNDSWS-WPLESSNIFSVKSLMKDLVDYPVIEDN----LYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS

Query:  WCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDV
        WC MC    E   HLF+HC  + + WS+      W++  PN +K +
Subjt:  WCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDV

RVW53692.1 putative ribonuclease H protein [Vitis vinifera]3.2e-3934.55Show/hide
Query:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFW----EGSRAKYYNSNLSSVWPSIIQRSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWH
        R TL Q+ L+ +P Y+LSLFK+P  VA  +++L RDF W    EG R      ++     +I  R SH+ PW+ I+          +  +GNG    FW 
Subjt:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFW----EGSRAKYYNSNLSSVWPSIIQRSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWH

Query:  DSWLSCGILATNFPRLYR-LTDRPRSLVGETWIASQTAWDLSLMRNLNDLETEEWVELSLILSSISLQ-NRNDSWSWPLESSNIFSVKSLMKDLVDYPVI
        D W     L T +PRL+R + D+  S+      +    W+L+  RNL+D E E+   L   L  + L  +  D+  WPL SS +FSVKS    L      
Subjt:  DSWLSCGILATNFPRLYR-LTDRPRSLVGETWIASQTAWDLSLMRNLNDLETEEWVELSLILSSISLQ-NRNDSWSWPLESSNIFSVKSLMKDLVDYPVI

Query:  EDNL-YKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDVLTLIFP
          N   K +W    P K+K F+W ++H  +NT D LQ R P+  LSP  CI+C    E + HLF+HCS+    W  +        V P  I D++++ F 
Subjt:  EDNL-YKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDVLTLIFP

Query:  G
        G
Subjt:  G

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein2.4e-4029.38Show/hide
Query:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEGSR-------------------------------------------------------AK
        R TL  + L S+PIY +S+FK+P+ +A+ ++   R+F W G+                                                        +K
Subjt:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEGSR-------------------------------------------------------AK

Query:  YYNSNLSSVWPSIIQRSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLNDL
        Y    + S +PS  + SS+ SPW+ ++  +   Y      + +G   SFW D+W     L+   PRL+ L+   +  V E W  S   W L + R L D 
Subjt:  YYNSNLSSVWPSIIQRSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLNDL

Query:  ETEEWVELSLILSSISLQNRNDSWSWPLESSNIFSVKSLMKDLVDYPV----IEDNLYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS
        E   W  +   L +      +    W L S+NIF   S+ + + + P+       NLYK +W   +PKK K F+W L HG INTADRLQ+R+P++ LSP+
Subjt:  ETEEWVELSLILSSISLQNRNDSWSWPLESSNIFSVKSLMKDLVDYPV----IEDNLYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS

Query:  WCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWST
        WC MC    E   HLF+HC  + + WS+      W++
Subjt:  WCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWST

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein3.1e-4030.06Show/hide
Query:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEGSRAKY------------------------------------------------------
        R TL  + L S+PIY LS+FK+P+ +A+ ++   R+F W G+   +                                                      
Subjt:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEGSRAKY------------------------------------------------------

Query:  YNSNLSSVWPSIIQRSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLNDLE
        Y+      +PS  + SS+ SPW+ +++ +   Y      + +G   SFW D+W     L+   PRL+ L+   +  V + W  S   W++ + R L D E
Subjt:  YNSNLSSVWPSIIQRSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLNDLE

Query:  TEEWVELSLILSSISLQNRNDSWS-WPLESSNIFSVKSLMKDLVDYPVIEDN----LYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS
           W  +   L +  L +R  S   W L S+NIF   S+ KDL +      N    LYK +W   +PKK K F+W L HG INTADRLQ+R+P++ LSP+
Subjt:  TEEWVELSLILSSISLQNRNDSWS-WPLESSNIFSVKSLMKDLVDYPVIEDN----LYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS

Query:  WCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDV
        WC MC    E   HLF+HC  + + WS+      W++  PN +K +
Subjt:  WCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDV

A0A5H2XQW2 TatD related DNase1.0e-4333.7Show/hide
Query:  WHQRCV----RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEG-----------------------------------SRAKY---YNSNLS
        W + C+    R TL QAVLSS+P YY+SLFK+P  V   +++L+R+F WEG                                    RAK+   +    +
Subjt:  WHQRCV----RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEG-----------------------------------SRAKY---YNSNLS

Query:  SVWPSIIQ----------------RSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQ----T
        S+W  II+                + S ++PWR IS          + S+GNG    FW D WL  GIL   FPRLY L+ R    +   W A+      
Subjt:  SVWPSIIQ----------------RSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQ----T

Query:  AWDLSLMRNLNDLETEEWVELSLILSSISL-QNRNDSWSWPLESSNIFSVKSLMKDLVDYPVIEDNLYKIIWTDSYPKKIKIFLWELSHGAINTADRLQR
         WD    RNL++ E  E V L  IL ++ L  +R D  SW +E    FS KS    L+    +    Y+ IW    P KI+ F+W  ++G INT D +QR
Subjt:  AWDLSLMRNLNDLETEEWVELSLILSSISL-QNRNDSWSWPLESSNIFSVKSLMKDLVDYPVIEDNLYKIIWTDSYPKKIKIFLWELSHGAINTADRLQR

Query:  RMPHFHLSPSWCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDVLTL
        R P   LSPSWC+ C   +E+  HLF+HCS + + W  +LDA G   V P    ++L++
Subjt:  RMPHFHLSPSWCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDVLTL

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)1.3e-4134.2Show/hide
Query:  WHQRCV----RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEG-----------------------------------SRAKY---YNSNLS
        W + C+    R TL QAVLSS+P YY+SLFK+P  VA  +++L+R+F WEG                                    RAK+   +    +
Subjt:  WHQRCV----RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEG-----------------------------------SRAKY---YNSNLS

Query:  SVWPSIIQR----SSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVG--ETWIASQTAWDLSLMRNLNDLE
        S+W  II+      S+ +PWR IS   +      + S+GNG    FW D WL  GIL   FPRL  L+ R    +            WD    RNL++ E
Subjt:  SVWPSIIQR----SSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVG--ETWIASQTAWDLSLMRNLNDLE

Query:  TEEWVELSLILSSISLQ-NRNDSWSWPLESSNIFSVKSLMKDLVDYPVIEDNLYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIM
          E V L  IL ++ L  +R D  SW +E    FS KS    L+         +  IW    P KI+ F+W  ++G INT D +QRR P   LSPSWC++
Subjt:  TEEWVELSLILSSISLQ-NRNDSWSWPLESSNIFSVKSLMKDLVDYPVIEDNLYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIM

Query:  CAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDVLTL
        C   +E+  HLF+HCS + R W ++L A G   V P    ++L++
Subjt:  CAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDVLTL

M5XV38 zf-RVT domain-containing protein2.4e-4033.05Show/hide
Query:  WHQRCV----RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEG-----------------------------------SRAKY---YNSNLS
        W + C+    R TL QAVLSS+P YY+SLFK+P  VA  +++L+R+F WEG                                    RAK+   +    +
Subjt:  WHQRCV----RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEG-----------------------------------SRAKY---YNSNLS

Query:  SVWPSIIQ----------------RSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVG--ETWIASQTAW
        S+W  II+                + S ++PWR IS   +      + S+GNG    FW D WL  GIL   FPRL  L+ R    +            W
Subjt:  SVWPSIIQ----------------RSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVG--ETWIASQTAW

Query:  DLSLMRNLNDLETEEWVELSLILSSISLQ-NRNDSWSWPLESSNIFSVKSLMKDLVDYPVIEDNLYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRM
        D    RNL++ E  E V L  IL ++ L  +R D  SW +E    FS KS    L+         +  IW    P KI+ F+W  ++G INT D +QRR 
Subjt:  DLSLMRNLNDLETEEWVELSLILSSISLQ-NRNDSWSWPLESSNIFSVKSLMKDLVDYPVIEDNLYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRM

Query:  PHFHLSPSWCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDVLTL
        P   LSPSWC++C   +E+  HLF+HCS + R W ++L A G   V P    ++L++
Subjt:  PHFHLSPSWCIMCAVGSEHSGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDVLTL

SwissProt top hitse value%identityAlignment
A1DE84 ATP-dependent RNA helicase dbp71.3e-0637.93Show/hide
Query:  PGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKR-KRDPKQDVSSSKKRTWKIGGKGL
        P  +++A++AF S +RAY  H    + +F +K+LHLGH+AK+FAL+ +PS +     +Q K+  K+D K + +S+  +  K GG  L
Subjt:  PGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKR-KRDPKQDVSSSKKRTWKIGGKGL

P0C2F6 Putative ribonuclease H protein At1g657501.7e-1424.77Show/hide
Query:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEGSRAKYYNSNL---------------------------------------SSVWPSIIQR
        R TL++AVLSSMP++ +S   LP+ +   LD+L R F W GS A+    +L                                       +S+W  ++Q+
Subjt:  RHTLSQAVLSSMPIYYLSLFKLPRKVARSLDKLLRDFFWEGSRAKYYNSNL---------------------------------------SSVWPSIIQR

Query:  SSH----------------KSPWRFIS-STMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLND
          H                 S WR I+    D+V        G+G    FW D W+S G          R TD    +  + WI  +  WD + +     
Subjt:  SSH----------------KSPWRFIS-STMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLND

Query:  LETEEWVELSLILSSISLQNRNDSWSWPLESSNIFSVKSLMKDLVDYPVIEDNL---YKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS
          T   +EL  ++  + +    D  SW       FSV+S  + L    V   N+   +  +W    P+++K FLW + + A+ T +   RR    HLS S
Subjt:  LETEEWVELSLILSSISLQNRNDSWSWPLESSNIFSVKSLMKDLVDYPVIEDNL---YKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPS

Query:  -WCIMCAVGSEHSGHLFVHCSIASRYWSEIL
          C +C  G E   H+   C      W  ++
Subjt:  -WCIMCAVGSEHSGHLFVHCSIASRYWSEIL

Q0DLB9 DEAD-box ATP-dependent RNA helicase 171.3e-1964.38Show/hide
Query:  KLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKRKRDPKQDVSSSKKR
        KLA+ AFCSWVRAYTAHRGELK+IF+VKKLHLGHVA+SF LK+QPS +G+S + Q+KKRK++ K++  + +++
Subjt:  KLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKRKRDPKQDVSSSKKR

Q4WV71 ATP-dependent RNA helicase dbp71.3e-0637.93Show/hide
Query:  PGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKR-KRDPKQDVSSSKKRTWKIGGKGL
        P  +++A++AF S +RAY  H    + +F +K+LHLGH+AK+FAL+ +PS +     +Q K+  K+D K + +S+  +  K GG  L
Subjt:  PGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKR-KRDPKQDVSSSKKRTWKIGGKGL

Q7XJN0 DEAD-box ATP-dependent RNA helicase 173.1e-2162.11Show/hide
Query:  LTLIFPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKRKRDPKQDVSSSKKRTWKIGGKGLRGFQ
        LT   P M  LA+ AF SWVR Y AH+GELK IFVVKKLHLGHVAKSFAL++QPS VGKS  K+  KRKRD +Q     KKR  K+ G G R  Q
Subjt:  LTLIFPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKRKRDPKQDVSSSKKRTWKIGGKGLRGFQ

Arabidopsis top hitse value%identityAlignment
AT2G40700.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein2.2e-2262.11Show/hide
Query:  LTLIFPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKRKRDPKQDVSSSKKRTWKIGGKGLRGFQ
        LT   P M  LA+ AF SWVR Y AH+GELK IFVVKKLHLGHVAKSFAL++QPS VGKS  K+  KRKRD +Q     KKR  K+ G G R  Q
Subjt:  LTLIFPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKRKRDPKQDVSSSKKRTWKIGGKGLRGFQ

AT4G29090.1 Ribonuclease H-like superfamily protein5.0e-0625.66Show/hide
Query:  WRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLNDLETEEW-----------VELSLI
        W+ I ++ +++   A+  +GNG     W   WL     A+   R+ R+  +  + V            +  + +L D    EW           VE  LI
Subjt:  WRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNLNDLETEEW-----------VELSLI

Query:  LSSISLQNRN--DSWSWPLESSNIFSVKS--------LMKDLVDYPVIEDNL---YKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLS-PSW
           +    R   DS++W   SS  ++VKS        + K      V E +L   Y+ IW      KI+ FLW+    ++  A  L  R    HLS  S 
Subjt:  LSSISLQNRN--DSWSWPLESSNIFSVKS--------LMKDLVDYPVIEDNL---YKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLS-PSW

Query:  CIMCAVGSEHSGHLFVHCSIASRYWS
        CI C    E   HL   C+ A   W+
Subjt:  CIMCAVGSEHSGHLFVHCSIASRYWS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCATGTATTCGATCAAGCCACTGCTACAAATTTATTCACACAACCAGATTGGACCCTTATTGGTAAGCATAGATTGAAATTTTATCCTCTAACCACTGCTAATGC
TCAACAGGACATCCTGACACCATCTTATGGAGGTTGGATTGAGATTTCTCTCCTTCCCCCTACCTTATGGACTGAGATTATTTTCCGTTTTATTGGAGATTCATGTGGCG
GTTTTGTGGAAATATCCAACCTTACTAATCGGATGATTATCGCCACTGATGCGAGGATACGAGTTCGGCCAAATAAATCTGGTTTCATCCCCGCTGCTGTCAAAATCCCT
CTAGACCTTGCCGGCGATGATCTTACAGTCCATATCAGAGGTATCTCCGGCAGCCCGCAGAGAATCGGTCACATTAATGATGGAATACCCAATTTGGCAAGTATGGATTT
CGCTTTAAAGAAGAGAGAGGAACCGGAGAAAGAAGTTTTGAATTCTATTTCGAAAAGGAAAATTCAGCTCGCAGATATGCCTCAAATCACGGGTACAGAAAATATCTCCT
CTCCACCACCATTATCGGATCAAATTGATAGAGGAAAGCTCCCTCTCCAAATCGCTGATTGTTCGGTTAATAAATTCGCTGGAACAACAAAGTTTAAATTCGGCAATATT
GGATCTACTTTTGCACCTAATTTGAATATCGGCAATATTGGTTCTGATACAGAAGCCTTCCTCTCAAGCCCATCTTCCAATCATTCGGCCCACAACTCAGCTCATAATCC
AACTTCTCCCAGAACCATGGACCTCACCATCTTTAATGATTCCCAAATTAATGGGCCTTTTGATGATTTACTGAACCAGCCTTATCCATCCCAAAATGATGGGCCTTTTG
ATAATTTAAAGAACCAACCATCCCAAATTGATGGGCCTTTTGATAATTTAAAGAACCAACCATCCCAAATTGATGGGCCTTTTGATAATTTAAAGAACCAACCATTCCAA
ATTGATGGGCCTTTTGATAATCCACCCTTTCCTGCCCCGATGGATACCTTACCTCCATTACAGCAATCCCCAAACCAAAAAACTCCTCCTCCCAAACCATCGGAATCCCT
CCAAATAACACCTCAACCTTCCCCACATATCTTGTCCCCAACCAAGTCCTTTCCCCATTGCCTACAACACTTAGCACCACTCTTAAGCAAGCATGGCCTTTGTTTCATGG
CCTTACCGACAGTACCAAAATCTTGTAAAAAGAAGAAATTGGCTACTACGGGGAAGAAACCTAAAATACCAAGGGAGCTTCAGAATCTTCAAACAAATGGATGGCCAGGC
CATGGTTTCATGATGAAGCTTAAAGGTTTGAAATCTGAACTTCGAAAATGGAATTTATCTCAGCGCTTATCTGTTGCACGACTTCCATCTCTCGTCACACAGTTGAAAAT
GTTGGATGATATAGAAGACAGGGTCCCATTATCCATGGAACAAATATCTTCTAGAAGATTATTGCGAGAACAAATTGAGGATTTGTCAGCTCAAGAACACATCTATTGGC
ATCAACGCTGTGTTCGACATACTCTTTCTCAAGCAGTTCTATCTAGTATGCCAATATATTATTTATCCTTATTCAAATTGCCAAGAAAGGTTGCAAGATCTCTTGATAAG
CTGCTTCGTGATTTCTTTTGGGAAGGATCTAGAGCTAAGTATTATAACTCTAATTTGAGTAGTGTTTGGCCTAGCATTATTCAGAGAAGTTCACACAAATCTCCTTGGCG
ATTTATTTCTTCTACTATGGACCTGGTATATTCTCGCGCTAAAAGAAGTTTGGGTAATGGTCTCGCTACATCTTTCTGGCATGATTCGTGGTTAAGTTGTGGTATTCTGG
CTACAAATTTTCCTCGTCTTTATCGTTTAACTGATCGTCCGAGGAGTTTGGTTGGTGAGACATGGATTGCTTCTCAAACAGCATGGGACCTGAGTCTTATGCGTAATTTG
AATGATTTAGAGACAGAAGAATGGGTGGAATTATCTCTTATTCTTTCCTCCATCAGCCTTCAGAACCGTAATGATTCCTGGTCATGGCCGTTGGAATCGTCCAATATTTT
TTCTGTTAAATCCCTTATGAAGGATCTTGTAGACTATCCAGTTATTGAGGATAATCTCTATAAGATAATTTGGACCGATTCCTATCCAAAGAAGATCAAGATTTTTCTAT
GGGAGCTTAGTCATGGTGCTATTAATACAGCTGATCGACTTCAACGTCGGATGCCTCATTTTCATTTGTCCCCATCTTGGTGCATTATGTGTGCCGTTGGTTCAGAACAT
TCTGGGCACCTATTTGTTCACTGTTCCATCGCTTCCAGATATTGGTCAGAGATTCTTGATGCTTTTGGATGGTCCACCGTTTTTCCAAATTGCATTAAGGATGTTCTCAC
TCTCATTTTTCCAGGAATGATGAAGTTGGCCCAGAAAGCATTTTGCTCTTGGGTTCGTGCATATACTGCTCATCGTGGTGAGTTGAAAAGAATTTTTGTGGTGAAGAAAC
TTCATTTGGGGCATGTAGCAAAGAGCTTTGCGTTGAAGCAACAACCTTCTGCTGTTGGAAAATCATTCAAGAAGCAGGTAAAGAAAAGGAAAAGAGATCCAAAGCAGGAT
GTCTCATCATCAAAAAAGAGGACTTGGAAAATCGGTGGAAAGGGCTTAAGGGGCTTTCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCCATGTATTCGATCAAGCCACTGCTACAAATTTATTCACACAACCAGATTGGACCCTTATTGGTAAGCATAGATTGAAATTTTATCCTCTAACCACTGCTAATGC
TCAACAGGACATCCTGACACCATCTTATGGAGGTTGGATTGAGATTTCTCTCCTTCCCCCTACCTTATGGACTGAGATTATTTTCCGTTTTATTGGAGATTCATGTGGCG
GTTTTGTGGAAATATCCAACCTTACTAATCGGATGATTATCGCCACTGATGCGAGGATACGAGTTCGGCCAAATAAATCTGGTTTCATCCCCGCTGCTGTCAAAATCCCT
CTAGACCTTGCCGGCGATGATCTTACAGTCCATATCAGAGGTATCTCCGGCAGCCCGCAGAGAATCGGTCACATTAATGATGGAATACCCAATTTGGCAAGTATGGATTT
CGCTTTAAAGAAGAGAGAGGAACCGGAGAAAGAAGTTTTGAATTCTATTTCGAAAAGGAAAATTCAGCTCGCAGATATGCCTCAAATCACGGGTACAGAAAATATCTCCT
CTCCACCACCATTATCGGATCAAATTGATAGAGGAAAGCTCCCTCTCCAAATCGCTGATTGTTCGGTTAATAAATTCGCTGGAACAACAAAGTTTAAATTCGGCAATATT
GGATCTACTTTTGCACCTAATTTGAATATCGGCAATATTGGTTCTGATACAGAAGCCTTCCTCTCAAGCCCATCTTCCAATCATTCGGCCCACAACTCAGCTCATAATCC
AACTTCTCCCAGAACCATGGACCTCACCATCTTTAATGATTCCCAAATTAATGGGCCTTTTGATGATTTACTGAACCAGCCTTATCCATCCCAAAATGATGGGCCTTTTG
ATAATTTAAAGAACCAACCATCCCAAATTGATGGGCCTTTTGATAATTTAAAGAACCAACCATCCCAAATTGATGGGCCTTTTGATAATTTAAAGAACCAACCATTCCAA
ATTGATGGGCCTTTTGATAATCCACCCTTTCCTGCCCCGATGGATACCTTACCTCCATTACAGCAATCCCCAAACCAAAAAACTCCTCCTCCCAAACCATCGGAATCCCT
CCAAATAACACCTCAACCTTCCCCACATATCTTGTCCCCAACCAAGTCCTTTCCCCATTGCCTACAACACTTAGCACCACTCTTAAGCAAGCATGGCCTTTGTTTCATGG
CCTTACCGACAGTACCAAAATCTTGTAAAAAGAAGAAATTGGCTACTACGGGGAAGAAACCTAAAATACCAAGGGAGCTTCAGAATCTTCAAACAAATGGATGGCCAGGC
CATGGTTTCATGATGAAGCTTAAAGGTTTGAAATCTGAACTTCGAAAATGGAATTTATCTCAGCGCTTATCTGTTGCACGACTTCCATCTCTCGTCACACAGTTGAAAAT
GTTGGATGATATAGAAGACAGGGTCCCATTATCCATGGAACAAATATCTTCTAGAAGATTATTGCGAGAACAAATTGAGGATTTGTCAGCTCAAGAACACATCTATTGGC
ATCAACGCTGTGTTCGACATACTCTTTCTCAAGCAGTTCTATCTAGTATGCCAATATATTATTTATCCTTATTCAAATTGCCAAGAAAGGTTGCAAGATCTCTTGATAAG
CTGCTTCGTGATTTCTTTTGGGAAGGATCTAGAGCTAAGTATTATAACTCTAATTTGAGTAGTGTTTGGCCTAGCATTATTCAGAGAAGTTCACACAAATCTCCTTGGCG
ATTTATTTCTTCTACTATGGACCTGGTATATTCTCGCGCTAAAAGAAGTTTGGGTAATGGTCTCGCTACATCTTTCTGGCATGATTCGTGGTTAAGTTGTGGTATTCTGG
CTACAAATTTTCCTCGTCTTTATCGTTTAACTGATCGTCCGAGGAGTTTGGTTGGTGAGACATGGATTGCTTCTCAAACAGCATGGGACCTGAGTCTTATGCGTAATTTG
AATGATTTAGAGACAGAAGAATGGGTGGAATTATCTCTTATTCTTTCCTCCATCAGCCTTCAGAACCGTAATGATTCCTGGTCATGGCCGTTGGAATCGTCCAATATTTT
TTCTGTTAAATCCCTTATGAAGGATCTTGTAGACTATCCAGTTATTGAGGATAATCTCTATAAGATAATTTGGACCGATTCCTATCCAAAGAAGATCAAGATTTTTCTAT
GGGAGCTTAGTCATGGTGCTATTAATACAGCTGATCGACTTCAACGTCGGATGCCTCATTTTCATTTGTCCCCATCTTGGTGCATTATGTGTGCCGTTGGTTCAGAACAT
TCTGGGCACCTATTTGTTCACTGTTCCATCGCTTCCAGATATTGGTCAGAGATTCTTGATGCTTTTGGATGGTCCACCGTTTTTCCAAATTGCATTAAGGATGTTCTCAC
TCTCATTTTTCCAGGAATGATGAAGTTGGCCCAGAAAGCATTTTGCTCTTGGGTTCGTGCATATACTGCTCATCGTGGTGAGTTGAAAAGAATTTTTGTGGTGAAGAAAC
TTCATTTGGGGCATGTAGCAAAGAGCTTTGCGTTGAAGCAACAACCTTCTGCTGTTGGAAAATCATTCAAGAAGCAGGTAAAGAAAAGGAAAAGAGATCCAAAGCAGGAT
GTCTCATCATCAAAAAAGAGGACTTGGAAAATCGGTGGAAAGGGCTTAAGGGGCTTTCAGTGA
Protein sequenceShow/hide protein sequence
MLHVFDQATATNLFTQPDWTLIGKHRLKFYPLTTANAQQDILTPSYGGWIEISLLPPTLWTEIIFRFIGDSCGGFVEISNLTNRMIIATDARIRVRPNKSGFIPAAVKIP
LDLAGDDLTVHIRGISGSPQRIGHINDGIPNLASMDFALKKREEPEKEVLNSISKRKIQLADMPQITGTENISSPPPLSDQIDRGKLPLQIADCSVNKFAGTTKFKFGNI
GSTFAPNLNIGNIGSDTEAFLSSPSSNHSAHNSAHNPTSPRTMDLTIFNDSQINGPFDDLLNQPYPSQNDGPFDNLKNQPSQIDGPFDNLKNQPSQIDGPFDNLKNQPFQ
IDGPFDNPPFPAPMDTLPPLQQSPNQKTPPPKPSESLQITPQPSPHILSPTKSFPHCLQHLAPLLSKHGLCFMALPTVPKSCKKKKLATTGKKPKIPRELQNLQTNGWPG
HGFMMKLKGLKSELRKWNLSQRLSVARLPSLVTQLKMLDDIEDRVPLSMEQISSRRLLREQIEDLSAQEHIYWHQRCVRHTLSQAVLSSMPIYYLSLFKLPRKVARSLDK
LLRDFFWEGSRAKYYNSNLSSVWPSIIQRSSHKSPWRFISSTMDLVYSRAKRSLGNGLATSFWHDSWLSCGILATNFPRLYRLTDRPRSLVGETWIASQTAWDLSLMRNL
NDLETEEWVELSLILSSISLQNRNDSWSWPLESSNIFSVKSLMKDLVDYPVIEDNLYKIIWTDSYPKKIKIFLWELSHGAINTADRLQRRMPHFHLSPSWCIMCAVGSEH
SGHLFVHCSIASRYWSEILDAFGWSTVFPNCIKDVLTLIFPGMMKLAQKAFCSWVRAYTAHRGELKRIFVVKKLHLGHVAKSFALKQQPSAVGKSFKKQVKKRKRDPKQD
VSSSKKRTWKIGGKGLRGFQ