CuGenDBv2

Gene ID	Spg003345
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Mediator of RNA polymerase II transcription subunit 14
Genome location	scaffold4:46147507..46148461
RNA-Seq Expression	Spg003345
Synteny	Spg003345
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0016592 - mediator complex (cellular component) GO:0070847 - core mediator complex (cellular component) GO:0003712 - transcription coregulator activity (molecular function)
InterPro domains	IPR013947 - Mediator complex, subunit Med14

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008455955.2 PREDICTED: mediator of RNA polymerase II transcription subunit 14 [Cucumis melo]

6.4e-23

83.1

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Query:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ
        MAADLGQQTV+FSALVSR A+DSFLSLK+LV+KSKSSDQSD +KK+NILK++FKT+QR+LRLYALAKWCQQ
Subjt:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ

XP_011648757.2 mediator of RNA polymerase II transcription subunit 14 [Cucumis sativus]

2.2e-23

84.51

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Query:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ
        MAADLGQQTV+FSALVSR ADDSFLSLK+LV+KSKSSDQSD +KK+NILK++FKT+QR+LRLYALAKWCQQ
Subjt:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ

XP_022999402.1 mediator of RNA polymerase II transcription subunit 14-like [Cucurbita maxima]

1.2e-21

78.87

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Query:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ
        MAA+LGQQTV+FSALVSR A+DSFLSLK+LV+ SKSSDQSD +KK+NILK+++KT+QR+LRLYALAKWCQQ
Subjt:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ

XP_023547307.1 mediator of RNA polymerase II transcription subunit 14-like [Cucurbita pepo subsp. pepo]

1.2e-21

78.87

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Query:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ
        MAA+LGQQTV+FSALVSR A+DSFLSLK+LV+ SKSSDQSD +KK+NILK+++KT+QR+LRLYALAKWCQQ
Subjt:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ

XP_038890326.1 mediator of RNA polymerase II transcription subunit 14 [Benincasa hispida]

3.2e-22

81.69

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Query:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ
        MAA+LGQQTV+FSALVSR A+DSFLSLK+LV+KSKSSDQSD  KK+NILK++FKT+QR+LRLYALAKWCQQ
Subjt:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFI5 Mediator of RNA polymerase II transcription subunit 14

1.1e-23

84.51

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Query:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ
        MAADLGQQTV+FSALVSR ADDSFLSLK+LV+KSKSSDQSD +KK+NILK++FKT+QR+LRLYALAKWCQQ
Subjt:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ

A0A1S3C281 Mediator of RNA polymerase II transcription subunit 14

3.1e-23

83.1

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Query:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ
        MAADLGQQTV+FSALVSR A+DSFLSLK+LV+KSKSSDQSD +KK+NILK++FKT+QR+LRLYALAKWCQQ
Subjt:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ

A0A5A7V7Q3 Mediator of RNA polymerase II transcription subunit 14

3.1e-23

83.1

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Query:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ
        MAADLGQQTV+FSALVSR A+DSFLSLK+LV+KSKSSDQSD +KK+NILK++FKT+QR+LRLYALAKWCQQ
Subjt:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ

A0A6J1G3G1 Mediator of RNA polymerase II transcription subunit 14

2.2e-21

77.46

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Query:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ
        MAA+LGQQTV+FSALVSR A+DSFLSLK+LV+ SKSSDQSD +KK++ILK+++KT+QR+LRLYALAKWCQQ
Subjt:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ

A0A6J1KAS6 Mediator of RNA polymerase II transcription subunit 14

5.8e-22

78.87

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Query:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ
        MAA+LGQQTV+FSALVSR A+DSFLSLK+LV+ SKSSDQSD +KK+NILK+++KT+QR+LRLYALAKWCQQ
Subjt:  MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ

SwissProt top hits

e value

%identity

Alignment

Q9SR02 Mediator of RNA polymerase II transcription subunit 14

5.8e-19

68.12

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Query:  ADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ
        A+LGQQTVDFSALV R A++SFLS K+LV+KSKS++ SD +KK+++LK++ KT+QRMLRL ALAKWC+Q
Subjt:  ADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ

Arabidopsis top hits

e value

%identity

Alignment

AT3G04740.1 RNA polymerase II transcription mediators

4.1e-20

68.12

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Query:  ADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ
        A+LGQQTVDFSALV R A++SFLS K+LV+KSKS++ SD +KK+++LK++ KT+QRMLRL ALAKWC+Q
Subjt:  ADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQ

Sequences

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CDS sequence

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ATGGCGGCCGACTTAGGGCAACAGACCGTCGACTTCTCTGCCCTCGTTTCCCGCGTTGCTGATGACTCCTTCCTCTCCCTCAAACAACTCGTCGAGAAGTCCAAATCCTC
CGACCAATCCGACGACCAGAAGAAGCTCAACATCCTCAAGTTCCTCTTCAAGACCGAGCAGAGGATGCTCCGCCTTTATGCCCTTGCCAAGTGGTGCCAACAGAATAGGC
ATTTGTTTAGCAGTTTGTATCTCACGGGAGTAGGAAAGCTAGGTGAGGCCATTGGGAATTGGACATCCCACAATCAGGAGGTTATTGTTCTTAAAATTGACTCTGAAAGG
CTCATGATTGTGTTGATTAGCTTTCTGGACAAGGTTCTCTAG

mRNA sequence

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Protein sequence

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MAADLGQQTVDFSALVSRVADDSFLSLKQLVEKSKSSDQSDDQKKLNILKFLFKTEQRMLRLYALAKWCQQNRHLFSSLYLTGVGKLGEAIGNWTSHNQEVIVLKIDSER
LMIVLISFLDKVL

Spg003345 (gene) of Sponge gourd (cylindrica) v1 genome