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Spg003362 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003362
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRING-box protein 1a-like
Genome locationscaffold4:49156124..49162214
RNA-Seq ExpressionSpg003362
SyntenySpg003362
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031461 - cullin-RING ubiquitin ligase complex (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
GO:0097602 - cullin family protein binding (molecular function)
InterPro domainsIPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3439695.1 hypothetical protein FNV43_RR17973 [Rhamnella rubrinervis]7.3e-3376.19Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE
        MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAW                         IVVDNCAICRNHIMDLCIECQANQASATSEE
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE

Query:  CTVAW
        CTVAW
Subjt:  CTVAW

XP_007218617.1 RING-box protein 1a [Prunus persica]1.6e-3275.24Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE
        MATLDSDVPMVPVGEASSSAGPSSTK+PKRFEIKKWNAVALWAW                         IVVDNCAICRNHIMDLCIECQANQASATSEE
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE

Query:  CTVAW
        CTVAW
Subjt:  CTVAW

XP_015889019.1 RING-box protein 1a [Ziziphus jujuba]7.3e-3376.19Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE
        MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAW                         IVVDNCAICRNHIMDLCIECQANQASATSEE
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE

Query:  CTVAW
        CTVAW
Subjt:  CTVAW

XP_027186546.1 RING-box protein 1a isoform X1 [Cicer arietinum]5.6e-3370.59Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAI------TSLIVLFVFMHRN--------LHIVVDNCAICRNHIMDLC
        MATLDSDVPMVP GEASSSA   S+KKPKRFEIKKWNAVALWAWG F   IF +      + L+ L  F   N        L IVVDNCAICRNHIMDLC
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAI------TSLIVLFVFMHRN--------LHIVVDNCAICRNHIMDLC

Query:  IECQANQASATSEECTVAW
        IECQANQASATSEECTVAW
Subjt:  IECQANQASATSEECTVAW

XP_027926838.1 RING-box protein 1a isoform X1 [Vigna unguiculata]4.3e-3372.41Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWG-----------NFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIEC
        MATLDSDV MVP GE SSSAGPSS+KKPKRFEIKKWNAVALWAWG           NF  LIF        F F+     IVVDNCAICRNHIMDLCIEC
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWG-----------NFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIEC

Query:  QANQASATSEECTVAW
        QANQASATSEECTVAW
Subjt:  QANQASATSEECTVAW

TrEMBL top hitse value%identityAlignment
A0A3Q7XRW7 RING-box protein 1a isoform X12.7e-3370.59Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAI------TSLIVLFVFMHRN--------LHIVVDNCAICRNHIMDLC
        MATLDSDVPMVP GEASSSA   S+KKPKRFEIKKWNAVALWAWG F   IF +      + L+ L  F   N        L IVVDNCAICRNHIMDLC
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAI------TSLIVLFVFMHRN--------LHIVVDNCAICRNHIMDLC

Query:  IECQANQASATSEECTVAW
        IECQANQASATSEECTVAW
Subjt:  IECQANQASATSEECTVAW

A0A6J1DPM4 RING-box protein 1a-like3.5e-3376.19Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE
        MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAW                         IVVDNCAICRNHIMDLCIECQANQASATSEE
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE

Query:  CTVAW
        CTVAW
Subjt:  CTVAW

A0A6J5U0H2 RING-type domain-containing protein7.9e-3375.24Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE
        MATLDSDVPMVPVGEASSSAGPSSTK+PKRFEIKKWNAVALWAW                         IVVDNCAICRNHIMDLCIECQANQASATSEE
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE

Query:  CTVAW
        CTVAW
Subjt:  CTVAW

A0A6P4A6G4 RING-box protein 1a3.5e-3376.19Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE
        MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAW                         IVVDNCAICRNHIMDLCIECQANQASATSEE
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE

Query:  CTVAW
        CTVAW
Subjt:  CTVAW

M5X2V0 RING-type domain-containing protein7.9e-3375.24Show/hide
Query:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE
        MATLDSDVPMVPVGEASSSAGPSSTK+PKRFEIKKWNAVALWAW                         IVVDNCAICRNHIMDLCIECQANQASATSEE
Subjt:  MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEE

Query:  CTVAW
        CTVAW
Subjt:  CTVAW

SwissProt top hitse value%identityAlignment
P62877 E3 ubiquitin-protein ligase RBX11.1e-2056.25Show/hide
Query:  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
        M    +  + +G +S    KRFE+KKWNAVALWAW                         IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
Subjt:  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW

P62878 E3 ubiquitin-protein ligase RBX11.1e-2056.25Show/hide
Query:  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
        M    +  + +G +S    KRFE+KKWNAVALWAW                         IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
Subjt:  MVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW

Q940X7 RING-box protein 1a3.9e-2967.92Show/hide
Query:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSE
        MATLDSDV M+P GEASSS A  SS KK KRFEIKKW+AVALWAW                         IVVDNCAICRNHIMDLCIECQANQASATSE
Subjt:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSE

Query:  ECTVAW
        ECTVAW
Subjt:  ECTVAW

Q9M2B0 RING-box protein 1b9.3e-2360.38Show/hide
Query:  MATLDSDVPMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSE
        MA+L+SDV M   GE+SS + P SS+K  KRFE+KKW+AVALWAW                         IVVDNCAICRNHIMDLCIEC ANQASATSE
Subjt:  MATLDSDVPMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSE

Query:  ECTVAW
        ECTVAW
Subjt:  ECTVAW

Q9W5E1 RING-box protein 1A8.7e-2163.95Show/hide
Query:  PSSTKK--PKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
        PSS+ K   KRFE+KKWNAVALWAW                         IVVDNCAICRNHIMDLCIECQANQASATSEECTVAW
Subjt:  PSSTKK--PKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEECTVAW

Arabidopsis top hitse value%identityAlignment
AT3G42830.1 RING/U-box superfamily protein6.6e-2460.38Show/hide
Query:  MATLDSDVPMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSE
        MA+L+SDV M   GE+SS + P SS+K  KRFE+KKW+AVALWAW                         IVVDNCAICRNHIMDLCIEC ANQASATSE
Subjt:  MATLDSDVPMVPVGEASSSAGP-SSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSE

Query:  ECTVAW
        ECTVAW
Subjt:  ECTVAW

AT5G20570.1 RING-box 12.8e-3067.92Show/hide
Query:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSE
        MATLDSDV M+P GEASSS A  SS KK KRFEIKKW+AVALWAW                         IVVDNCAICRNHIMDLCIECQANQASATSE
Subjt:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSE

Query:  ECTVAW
        ECTVAW
Subjt:  ECTVAW

AT5G20570.2 RING-box 12.8e-3067.92Show/hide
Query:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSE
        MATLDSDV M+P GEASSS A  SS KK KRFEIKKW+AVALWAW                         IVVDNCAICRNHIMDLCIECQANQASATSE
Subjt:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSE

Query:  ECTVAW
        ECTVAW
Subjt:  ECTVAW

AT5G20570.3 RING-box 17.8e-3373.58Show/hide
Query:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSE
        MATLDSDV M+P GEASSS A  SS KK KRFEIKKW+AVALWAWGN +       S I L +F     +IVVDNCAICRNHIMDLCIECQANQASATSE
Subjt:  MATLDSDVPMVPVGEASSS-AGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSE

Query:  ECTVAW
        ECTVAW
Subjt:  ECTVAW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTTTGGACTCCGACGTGCCCATGGTTCCGGTCGGCGAGGCTTCGAGCAGTGCCGGTCCTTCGTCTACCAAGAAACCCAAGCGTTTTGAGATCAAAAAATGGAA
CGCCGTCGCTCTTTGGGCATGGGGTAATTTCAAAACCCTAATCTTTGCGATTACTTCTCTCATTGTCCTGTTTGTCTTCATGCATCGAAACCTTCATATCGTTGTCGATA
ACTGTGCGATCTGCAGGAACCATATCATGGATCTTTGCATCGAGTGCCAAGCAAACCAGGCTAGCGCAACCAGCGAGGAATGTACTGTGGCGTGGGCTTCAAAGAAGATT
GCCGAATTGCTGGCTGGTGAGTATAAGGGGCTGCTGGAGTTACTTACTAAGGAAAGGATTACAAGGAATAAGGTTAGGATGAGAAAGGAAAAGCTCGTAAAGCGGGGGCG
AGTTGGCCATCAATTAGGAAACAACAAATTTGCTGATTCAGTAGGAATGTTGAGTAGTGGAGTACTTTATGGAATTGAGCGGGTTTTGGTGGTGGGCCATTTTAAGTTTT
TAGGCAACAAAGGTGTGAAGTTATTTCACAAAGGACACGGAGGAAACTATTGGCTGGAAAGGAAGGAAATCAAAGTGGAAGTGCATGAGTATAAGGGGCTGCTGGAATTA
CTTACTAAGGAAAGGATTACAAGGAATAAGGTTAGGATGAGAAAGGAAAAGCTCGTAAAGCGGGGGCGAGTTGGCCATCAATTAGGAAACAACAAATTTGCTGATTCAGT
AGGAATGTTGAGTAGTGGAGTACTTTATGGAATTGAGCGGGTTTTGGTGGTGGGCCATTTTAAGTTTTTAGGCAAAAAAGGTGTGAAGTTATTTCACAATGGACGCGGAG
GAAACTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACTTTGGACTCCGACGTGCCCATGGTTCCGGTCGGCGAGGCTTCGAGCAGTGCCGGTCCTTCGTCTACCAAGAAACCCAAGCGTTTTGAGATCAAAAAATGGAA
CGCCGTCGCTCTTTGGGCATGGGGTAATTTCAAAACCCTAATCTTTGCGATTACTTCTCTCATTGTCCTGTTTGTCTTCATGCATCGAAACCTTCATATCGTTGTCGATA
ACTGTGCGATCTGCAGGAACCATATCATGGATCTTTGCATCGAGTGCCAAGCAAACCAGGCTAGCGCAACCAGCGAGGAATGTACTGTGGCGTGGGCTTCAAAGAAGATT
GCCGAATTGCTGGCTGGTGAGTATAAGGGGCTGCTGGAGTTACTTACTAAGGAAAGGATTACAAGGAATAAGGTTAGGATGAGAAAGGAAAAGCTCGTAAAGCGGGGGCG
AGTTGGCCATCAATTAGGAAACAACAAATTTGCTGATTCAGTAGGAATGTTGAGTAGTGGAGTACTTTATGGAATTGAGCGGGTTTTGGTGGTGGGCCATTTTAAGTTTT
TAGGCAACAAAGGTGTGAAGTTATTTCACAAAGGACACGGAGGAAACTATTGGCTGGAAAGGAAGGAAATCAAAGTGGAAGTGCATGAGTATAAGGGGCTGCTGGAATTA
CTTACTAAGGAAAGGATTACAAGGAATAAGGTTAGGATGAGAAAGGAAAAGCTCGTAAAGCGGGGGCGAGTTGGCCATCAATTAGGAAACAACAAATTTGCTGATTCAGT
AGGAATGTTGAGTAGTGGAGTACTTTATGGAATTGAGCGGGTTTTGGTGGTGGGCCATTTTAAGTTTTTAGGCAAAAAAGGTGTGAAGTTATTTCACAATGGACGCGGAG
GAAACTATTGA
Protein sequenceShow/hide protein sequence
MATLDSDVPMVPVGEASSSAGPSSTKKPKRFEIKKWNAVALWAWGNFKTLIFAITSLIVLFVFMHRNLHIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWASKKI
AELLAGEYKGLLELLTKERITRNKVRMRKEKLVKRGRVGHQLGNNKFADSVGMLSSGVLYGIERVLVVGHFKFLGNKGVKLFHKGHGGNYWLERKEIKVEVHEYKGLLEL
LTKERITRNKVRMRKEKLVKRGRVGHQLGNNKFADSVGMLSSGVLYGIERVLVVGHFKFLGKKGVKLFHNGRGGNY