; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003363 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003363
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationscaffold4:46195295..46196789
RNA-Seq ExpressionSpg003363
SyntenySpg003363
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139239.1 pathogenesis-related protein PR-4 [Cucumis sativus]3.6e-7091.55Show/hide
Query:  MERGSLMM-LVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        M +GS+MM LVLALG+LSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIV
Subjt:  MERGSLMM-LVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGN RGHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]3.8e-7293.66Show/hide
Query:  MERGSLMM-LVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+GS+MM LVLALG+LSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIV
Subjt:  MERGSLMM-LVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHL VNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

XP_022946136.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]1.8e-6990.85Show/hide
Query:  MERGS-LMMLVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+ S LM+L LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTET ASEIV
Subjt:  MERGS-LMMLVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]1.2e-7091.55Show/hide
Query:  MERGS-LMMLVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+GS LM+L LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTET ASEIV
Subjt:  MERGS-LMMLVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

XP_023521169.1 pathogenesis-related protein P2-like [Cucurbita pepo subsp. pepo]1.8e-6990.85Show/hide
Query:  MERGS-LMMLVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        M++G  LM+L LALG+LSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLE+RRRYGWTAFCGPVGPRGQASCGRCLRVTNTET+ASEIV
Subjt:  MERGS-LMMLVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNG  RGHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LIC8 Barwin domain-containing protein1.7e-7091.55Show/hide
Query:  MERGSLMM-LVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        M +GS+MM LVLALG+LSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDA+KPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIV
Subjt:  MERGSLMM-LVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGN RGHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like1.8e-7293.66Show/hide
Query:  MERGSLMM-LVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+GS+MM LVLALG+LSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIV
Subjt:  MERGSLMM-LVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHL VNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like1.8e-7293.66Show/hide
Query:  MERGSLMM-LVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+GS+MM LVLALG+LSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTET ASEIV
Subjt:  MERGSLMM-LVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHL VNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like8.6e-7090.85Show/hide
Query:  MERGS-LMMLVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+ S LM+L LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTET ASEIV
Subjt:  MERGS-LMMLVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like5.9e-7191.55Show/hide
Query:  MERGS-LMMLVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV
        ME+GS LM+L LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTET ASEIV
Subjt:  MERGS-LMMLVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG FRGHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN11.8e-5374.79Show/hide
Query:  SATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDT
        SA NVRATYH+YNPQ++ WD    S +C+TWDANKPL WR++YGWTAFCGPVGPRG+ SCG+CLRVTNT T A   VRIVDQC+NGGLDLDVNVFR+IDT
Subjt:  SATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDT

Query:  NGNGNFRGHLIVNYEFVNC
        +GNGN +GHLIVNY+FV+C
Subjt:  NGNGNFRGHLIVNYEFVNC

P09762 Wound-induced protein WIN23.9e-5172.27Show/hide
Query:  SATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDT
        SA NVRATYH+YNPQ++ WD    S +C+TWDANKP  WR +YGWTAFCGPVGPRG+ SCG+CLRVTNT T A   VRIVDQC+NGGLDLD+NVF++IDT
Subjt:  SATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRIDT

Query:  NGNGNFRGHLIVNYEFVNC
        +G GN +GHLIVNY+FVNC
Subjt:  NGNGNFRGHLIVNYEFVNC

P29062 Pathogenesis-related protein PR-4A9.8e-5570.34Show/hide
Query:  MERGSLMMLVLALGLLS----LANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRAS
        MER +   L +AL ++S    +A AQSATNVR+TYHLYNPQ+INWD   AS FCATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT T   
Subjt:  MERGSLMMLVLALGLLS----LANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRAS

Query:  EIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
          VRIVDQC+NGGLDLDVNVF ++DTNG G  +GHL VNYEFVNC
Subjt:  EIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

P29063 Pathogenesis-related protein PR-4B2.6e-5571.03Show/hide
Query:  MERGSLMMLVLALGLLS----LANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRAS
        MER +   L +AL ++S    +A AQSATNVR+TYHLYNPQ+INWD   AS FCATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT T   
Subjt:  MERGSLMMLVLALGLLS----LANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRAS

Query:  EIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
          VRIVDQC+NGGLDLDVNVF ++DTNG G  +GHLIVNYEFVNC
Subjt:  EIVRIVDQCANGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

P32045 Pathogenesis-related protein P26.1e-5779.53Show/hide
Query:  LLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDV
        ++++A AQSATNVRATYHLYNPQ+INWD   ASV+CATWDA+KPLEWRRRYGWTAFCGP GP GQASCGRCLRVTNT T   E VRIVDQC NGGLDLDV
Subjt:  LLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDV

Query:  NVFRRIDTNGNGNFRGHLIVNYEFVNC
        NVF R+DTNG G  RG+L VNYEFVNC
Subjt:  NVFRRIDTNGNGNFRGHLIVNYEFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 44.1e-4867.5Show/hide
Query:  QSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRID
        +SA+NVRATYH YNP   NWD    S +C+TWDA+KP  WR +YGWTAFCGP GPRGQASCG+CLRV NT T A+  VRIVDQC+NGGLDLDV +F +ID
Subjt:  QSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGLDLDVNVFRRID

Query:  TNGNGNFRGHLIVNYEFVNC
        T+G G  +GHLIV+Y+FV+C
Subjt:  TNGNGNFRGHLIVNYEFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGGAAGTTTGATGATGTTGGTGTTGGCTTTGGGGCTTTTGAGCTTGGCAAATGCTCAAAGTGCCACAAATGTGAGGGCTACATATCACTTGTACAACCCTCA
AGACATCAATTGGGATTACCTTAGAGCAAGTGTGTTTTGTGCAACATGGGATGCCAACAAACCTTTAGAGTGGCGCCGCCGCTACGGCTGGACAGCCTTCTGCGGCCCTG
TCGGCCCTCGTGGCCAAGCTTCTTGTGGTCGTTGCTTGAGGGTGACTAACACTGAAACAAGAGCTTCAGAAATAGTAAGAATTGTTGATCAATGCGCCAATGGAGGCTTG
GATTTGGACGTGAATGTATTTAGGAGAATCGACACCAATGGAAATGGAAACTTCCGAGGCCATCTTATTGTCAACTATGAATTTGTCAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAGGAAGTTTGATGATGTTGGTGTTGGCTTTGGGGCTTTTGAGCTTGGCAAATGCTCAAAGTGCCACAAATGTGAGGGCTACATATCACTTGTACAACCCTCA
AGACATCAATTGGGATTACCTTAGAGCAAGTGTGTTTTGTGCAACATGGGATGCCAACAAACCTTTAGAGTGGCGCCGCCGCTACGGCTGGACAGCCTTCTGCGGCCCTG
TCGGCCCTCGTGGCCAAGCTTCTTGTGGTCGTTGCTTGAGGGTGACTAACACTGAAACAAGAGCTTCAGAAATAGTAAGAATTGTTGATCAATGCGCCAATGGAGGCTTG
GATTTGGACGTGAATGTATTTAGGAGAATCGACACCAATGGAAATGGAAACTTCCGAGGCCATCTTATTGTCAACTATGAATTTGTCAATTGTTGA
Protein sequenceShow/hide protein sequence
MERGSLMMLVLALGLLSLANAQSATNVRATYHLYNPQDINWDYLRASVFCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETRASEIVRIVDQCANGGL
DLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC