; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003443 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003443
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationscaffold4:46213170..46214184
RNA-Seq ExpressionSpg003443
SyntenySpg003443
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599312.1 hypothetical protein SDJN03_09090, partial [Cucurbita argyrosperma subsp. sororia]6.7e-6991.18Show/hide
Query:  LMMLVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQC
        LM+L LALG+LSLANAQSA NVR+TYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQ SCGRCLRVTNTET +SEIVRIVDQC
Subjt:  LMMLVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQC

Query:  SNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC
        +NGGLDLDVNVFKRIDTNGNG+ RGHLIVNY+FVNC
Subjt:  SNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC

XP_004139239.1 pathogenesis-related protein PR-4 [Cucumis sativus]1.4e-6989.44Show/hide
Query:  MKRGSLMM-LVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV
        M +GS+MM LVLALG+LSLANAQSATNVR+TYHLYNPQDINWDYLRASVFCATWDA+KP+EWRRQYGWTAFCGPVGPRG+DSCGRCLRVTNTET ASEIV
Subjt:  MKRGSLMM-LVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV

Query:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG  RGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]2.3e-6988.73Show/hide
Query:  MKRGSLMM-LVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV
        M++GS+MM LVLALG+LSLANAQSATNVR+TYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRG+DSCGRCLRVTNTET ASEIV
Subjt:  MKRGSLMM-LVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV

Query:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG  RGHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC

XP_022946136.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]3.0e-6991.91Show/hide
Query:  LMMLVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQC
        LM+L LALG+LSLANAQSA NVR+TYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQ SCGRCLRVTNTET ASEIVRIVDQC
Subjt:  LMMLVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQC

Query:  SNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC
        +NGGLDLDVNVFKRIDTNGNG+ RGHLIVNY+FVNC
Subjt:  SNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]4.7e-7090.14Show/hide
Query:  MKRGS-LMMLVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV
        M++GS LM+L LALG+LSLANAQSA NVR+TYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQ SCGRCLRVTNTET ASEIV
Subjt:  MKRGS-LMMLVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV

Query:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVFKRIDTNGNG+ RGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LIC8 Barwin domain-containing protein6.6e-7089.44Show/hide
Query:  MKRGSLMM-LVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV
        M +GS+MM LVLALG+LSLANAQSATNVR+TYHLYNPQDINWDYLRASVFCATWDA+KP+EWRRQYGWTAFCGPVGPRG+DSCGRCLRVTNTET ASEIV
Subjt:  MKRGSLMM-LVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV

Query:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG  RGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like1.1e-6988.73Show/hide
Query:  MKRGSLMM-LVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV
        M++GS+MM LVLALG+LSLANAQSATNVR+TYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRG+DSCGRCLRVTNTET ASEIV
Subjt:  MKRGSLMM-LVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV

Query:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG  RGHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like1.1e-6988.73Show/hide
Query:  MKRGSLMM-LVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV
        M++GS+MM LVLALG+LSLANAQSATNVR+TYHLYNPQDINWDYLRASVFCATWDANKP+EWRR+YGWTAFCGPVGPRG+DSCGRCLRVTNTET ASEIV
Subjt:  MKRGSLMM-LVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV

Query:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG  RGHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like1.5e-6991.91Show/hide
Query:  LMMLVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQC
        LM+L LALG+LSLANAQSA NVR+TYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQ SCGRCLRVTNTET ASEIVRIVDQC
Subjt:  LMMLVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQC

Query:  SNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC
        +NGGLDLDVNVFKRIDTNGNG+ RGHLIVNY+FVNC
Subjt:  SNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like2.3e-7090.14Show/hide
Query:  MKRGS-LMMLVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV
        M++GS LM+L LALG+LSLANAQSA NVR+TYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQ SCGRCLRVTNTET ASEIV
Subjt:  MKRGS-LMMLVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIV

Query:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVFKRIDTNGNG+ RGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN14.1e-5373.11Show/hide
Query:  SATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQCSNGGLDLDVNVFKRIDT
        SA NVR+TYH+YNPQ++ WD    S +C+TWDANKP+ WR++YGWTAFCGPVGPRG+DSCG+CLRVTNT T A   VRIVDQCSNGGLDLDVNVF++IDT
Subjt:  SATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQCSNGGLDLDVNVFKRIDT

Query:  NGNGIARGHLIVNYEFVNC
        +GNG  +GHLIVNY+FV+C
Subjt:  NGNGIARGHLIVNYEFVNC

P09762 Wound-induced protein WIN21.0e-5172.27Show/hide
Query:  SATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQCSNGGLDLDVNVFKRIDT
        SA NVR+TYH+YNPQ++ WD    S +C+TWDANKP  WR +YGWTAFCGPVGPRG+DSCG+CLRVTNT T A   VRIVDQCSNGGLDLD+NVF++IDT
Subjt:  SATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQCSNGGLDLDVNVFKRIDT

Query:  NGNGIARGHLIVNYEFVNC
        +G G  +GHLIVNY+FVNC
Subjt:  NGNGIARGHLIVNYEFVNC

P29062 Pathogenesis-related protein PR-4A1.4e-5673.13Show/hide
Query:  MLVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQCSN
        +L++++ ++++A AQSATNVRSTYHLYNPQ+INWD   AS FCATWDA+KP+ WR++YGWTAFCGP GPRGQDSCGRCLRVTNT T     VRIVDQCSN
Subjt:  MLVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQCSN

Query:  GGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC
        GGLDLDVNVF ++DTNG G  +GHL VNYEFVNC
Subjt:  GGLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC

P29063 Pathogenesis-related protein PR-4B2.8e-5774.44Show/hide
Query:  LVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQCSNG
        L++   ++++A AQSATNVRSTYHLYNPQ+INWD   AS FCATWDA+KP+ WR++YGWTAFCGP GPRGQDSCGRCLRVTNT T     VRIVDQCSNG
Subjt:  LVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQCSNG

Query:  GLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC
        GLDLDVNVF ++DTNG G  +GHLIVNYEFVNC
Subjt:  GLDLDVNVFKRIDTNGNGIARGHLIVNYEFVNC

P32045 Pathogenesis-related protein P24.0e-5676.38Show/hide
Query:  LLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQCSNGGLDLDV
        ++++A AQSATNVR+TYHLYNPQ+INWD   ASV+CATWDA+KP+EWRR+YGWTAFCGP GP GQ SCGRCLRVTNT T   E VRIVDQC NGGLDLDV
Subjt:  LLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQCSNGGLDLDV

Query:  NVFKRIDTNGNGIARGHLIVNYEFVNC
        NVF R+DTNG G  RG+L VNYEFVNC
Subjt:  NVFKRIDTNGNGIARGHLIVNYEFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 43.1e-4866.67Show/hide
Query:  QSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQCSNGGLDLDVNVFKRID
        +SA+NVR+TYH YNP   NWD    S +C+TWDA+KP  WR +YGWTAFCGP GPRGQ SCG+CLRV NT T+A+  VRIVDQCSNGGLDLDV +F +ID
Subjt:  QSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQCSNGGLDLDVNVFKRID

Query:  TNGNGIARGHLIVNYEFVNC
        T+G G  +GHLIV+Y+FV+C
Subjt:  TNGNGIARGHLIVNYEFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGAGGAAGTTTGATGATGTTGGTGTTGGCTTTGGGGCTTTTGAGCTTGGCAAATGCTCAAAGTGCCACAAATGTGAGGTCTACATATCACTTGTACAACCCTCA
AGACATCAATTGGGATTATCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCAACAAGCCCATAGAGTGGCGCCGCCAGTACGGCTGGACGGCCTTCTGCGGTCCTG
TCGGTCCTCGTGGCCAAGATTCTTGCGGACGTTGTTTGAGAGTGACTAACACTGAAACAAGCGCTTCAGAAATTGTGAGAATCGTTGATCAATGTTCCAATGGAGGGTTA
GATTTGGATGTGAATGTGTTTAAGAGGATCGACACTAATGGAAATGGAATTGCCCGAGGCCACCTTATTGTCAACTACGAATTCGTCAATTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGAGGAAGTTTGATGATGTTGGTGTTGGCTTTGGGGCTTTTGAGCTTGGCAAATGCTCAAAGTGCCACAAATGTGAGGTCTACATATCACTTGTACAACCCTCA
AGACATCAATTGGGATTATCTTAGGGCAAGTGTTTTTTGTGCAACATGGGATGCCAACAAGCCCATAGAGTGGCGCCGCCAGTACGGCTGGACGGCCTTCTGCGGTCCTG
TCGGTCCTCGTGGCCAAGATTCTTGCGGACGTTGTTTGAGAGTGACTAACACTGAAACAAGCGCTTCAGAAATTGTGAGAATCGTTGATCAATGTTCCAATGGAGGGTTA
GATTTGGATGTGAATGTGTTTAAGAGGATCGACACTAATGGAAATGGAATTGCCCGAGGCCACCTTATTGTCAACTACGAATTCGTCAATTGTTAA
Protein sequenceShow/hide protein sequence
MKRGSLMMLVLALGLLSLANAQSATNVRSTYHLYNPQDINWDYLRASVFCATWDANKPIEWRRQYGWTAFCGPVGPRGQDSCGRCLRVTNTETSASEIVRIVDQCSNGGL
DLDVNVFKRIDTNGNGIARGHLIVNYEFVNC