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Spg003466 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003466
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMuDRA-like transposase
Genome locationscaffold4:49409811..49414712
RNA-Seq ExpressionSpg003466
SyntenySpg003466
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050460.1 MuDRA-like transposase [Cucumis melo var. makuwa]4.2e-1829.08Show/hide
Query:  RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNF--GSRVPTYLIRNDRELRFFLSGEDASKLPLYLS-----
        RI V YG  W E  R YEG  L G+ V+ +I +++   ELY+++ ++P +FD+ IRC+Y        P + + ND +L+F++  E+  ++PLYLS     
Subjt:  RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNF--GSRVPTYLIRNDRELRFFLSGEDASKLPLYLS-----

Query:  -----MISKDVHGSG-----SNLGSHSHI-PHTL----------------SQPFPQPPPSFAQT--------VPYNLAENIPSSIPSYHPTYDNVSSPTP
             +++KD +         NL SH  I   TL                ++ F  P    A T        V Y+ ++ +  S  +             
Subjt:  -----MISKDVHGSG-----SNLGSHSHI-PHTL----------------SQPFPQPPPSFAQT--------VPYNLAENIPSSIPSYHPTYDNVSSPTP

Query:  ISNTFVPLDLADDN------------TPNFGIEENLYTGDDTLNYEEQEYD--EEEDENWEYNEEDEE--LDESYEEESEADEFEEVDGVEADEPIYPVG
          NT     + D                 F     LY   D +    Q+YD     ++ W   E   E  L    E  +    + E       E IY VG
Subjt:  ISNTFVPLDLADDN------------TPNFGIEENLYTGDDTLNYEEQEYD--EEEDENWEYNEEDEE--LDESYEEESEADEFEEVDGVEADEPIYPVG

Query:  PMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT
          S+WK   ++  M +LPPK V RVGR +  RI S GE P++   HKC RC  IGHNR TC  P+S T
Subjt:  PMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT

XP_022153143.1 uncharacterized protein LOC111020711 [Momordica charantia]1.8e-1661.33Show/hide
Query:  EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT
        EP+YP G   +W  P  F E ++ PPK V RVGR +TVRIPS GE    +QVHKC RCGN+GHNRKTCR+PL TT
Subjt:  EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT

XP_022156830.1 uncharacterized protein LOC111023664 [Momordica charantia]1.8e-1659.46Show/hide
Query:  EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST
        EP+YP+G   +W  P +F +  + PP+ V+RVGRR+T+RIPSAGE    +QVHKCG CGN+GHNRKTCR+PL T
Subjt:  EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST

XP_022156834.1 uncharacterized protein LOC111023667 [Momordica charantia]2.6e-2337.89Show/hide
Query:  VPRIRMPRIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPL
        VP + M R+FV YGG W E    YEGG + GLDV+  I Y   +  L+ ++ I+PDQFDLI++C+Y F  R  VP YLI +D  L+F+L+G  D S++PL
Subjt:  VPRIRMPRIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPL

Query:  YLSMISKDVHGSGSNLGSHSHIPHTLSQPFPQPP----PSFAQTVPYNLA---ENIPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFG-IEEN-
        Y+++I K  +GSGS  G++     T S  FP  P    P F +T+  +       +PS IP   P  DNV          +P +L DD +P +G + EN 
Subjt:  YLSMISKDVHGSGSNLGSHSHIPHTLSQPFPQPP----PSFAQTVPYNLA---ENIPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFG-IEEN-

Query:  ---LYTGDDTLNYEEQE------------YDEEEDENWEYNEEDEELDESYEEESE
            +  DD  +Y+E              YD  E++  EY+ ED  LDE YE E +
Subjt:  ---LYTGDDTLNYEEQE------------YDEEEDENWEYNEEDEELDESYEEESE

XP_022157875.1 uncharacterized protein LOC111024486 [Momordica charantia]4.0e-1660.81Show/hide
Query:  EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST
        EP+YP+G   +W    ++    I PPK V RVGRR+T RIPSAGE   ++QVHKCGRCGN+GHNRKTCR+PL T
Subjt:  EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST

TrEMBL top hitse value%identityAlignment
A0A5A7U5G9 MuDRA-like transposase2.1e-1829.08Show/hide
Query:  RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNF--GSRVPTYLIRNDRELRFFLSGEDASKLPLYLS-----
        RI V YG  W E  R YEG  L G+ V+ +I +++   ELY+++ ++P +FD+ IRC+Y        P + + ND +L+F++  E+  ++PLYLS     
Subjt:  RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNF--GSRVPTYLIRNDRELRFFLSGEDASKLPLYLS-----

Query:  -----MISKDVHGSG-----SNLGSHSHI-PHTL----------------SQPFPQPPPSFAQT--------VPYNLAENIPSSIPSYHPTYDNVSSPTP
             +++KD +         NL SH  I   TL                ++ F  P    A T        V Y+ ++ +  S  +             
Subjt:  -----MISKDVHGSG-----SNLGSHSHI-PHTL----------------SQPFPQPPPSFAQT--------VPYNLAENIPSSIPSYHPTYDNVSSPTP

Query:  ISNTFVPLDLADDN------------TPNFGIEENLYTGDDTLNYEEQEYD--EEEDENWEYNEEDEE--LDESYEEESEADEFEEVDGVEADEPIYPVG
          NT     + D                 F     LY   D +    Q+YD     ++ W   E   E  L    E  +    + E       E IY VG
Subjt:  ISNTFVPLDLADDN------------TPNFGIEENLYTGDDTLNYEEQEYD--EEEDENWEYNEEDEE--LDESYEEESEADEFEEVDGVEADEPIYPVG

Query:  PMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT
          S+WK   ++  M +LPPK V RVGR +  RI S GE P++   HKC RC  IGHNR TC  P+S T
Subjt:  PMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT

A0A6J1DGQ6 uncharacterized protein LOC1110207118.6e-1761.33Show/hide
Query:  EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT
        EP+YP G   +W  P  F E ++ PPK V RVGR +TVRIPS GE    +QVHKC RCGN+GHNRKTCR+PL TT
Subjt:  EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT

A0A6J1DRF6 uncharacterized protein LOC1110236648.6e-1759.46Show/hide
Query:  EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST
        EP+YP+G   +W  P +F +  + PP+ V+RVGRR+T+RIPSAGE    +QVHKCG CGN+GHNRKTCR+PL T
Subjt:  EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST

A0A6J1DU86 uncharacterized protein LOC1110244861.9e-1660.81Show/hide
Query:  EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST
        EP+YP+G   +W    ++    I PPK V RVGRR+T RIPSAGE   ++QVHKCGRCGN+GHNRKTCR+PL T
Subjt:  EPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLST

A0A6J1DUS4 uncharacterized protein LOC1110236671.2e-2337.89Show/hide
Query:  VPRIRMPRIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPL
        VP + M R+FV YGG W E    YEGG + GLDV+  I Y   +  L+ ++ I+PDQFDLI++C+Y F  R  VP YLI +D  L+F+L+G  D S++PL
Subjt:  VPRIRMPRIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNFGSR--VPTYLIRNDRELRFFLSG-EDASKLPL

Query:  YLSMISKDVHGSGSNLGSHSHIPHTLSQPFPQPP----PSFAQTVPYNLA---ENIPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFG-IEEN-
        Y+++I K  +GSGS  G++     T S  FP  P    P F +T+  +       +PS IP   P  DNV          +P +L DD +P +G + EN 
Subjt:  YLSMISKDVHGSGSNLGSHSHIPHTLSQPFPQPP----PSFAQTVPYNLA---ENIPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFG-IEEN-

Query:  ---LYTGDDTLNYEEQE------------YDEEEDENWEYNEEDEELDESYEEESE
            +  DD  +Y+E              YD  E++  EY+ ED  LDE YE E +
Subjt:  ---LYTGDDTLNYEEQE------------YDEEEDENWEYNEEDEELDESYEEESE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGGGCGGGATCCCTTTGTTCAAGCCCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTTATTCGGGTAGGAGTGAATTCCTTCTTGCACGACTATGT
CCCCAGCTATCTACCCGTTCCTATCCCTGAAATGGGAGGCTTATTGAGTCGGCGATACCGAGCCACTCTCACCTATGCAGATCTAAGGATAAGCCCGAATAAACAGGAGT
TCATAGACGCCCCCACTCGCATGTCTCTACATGGACGATTTAGGATCACATCGTCTATACCATCTATAAAGTGGGCCGCGTCTCATAGTGTCCCCAGAATAAGAATGCCT
CGAATCTTTGTGTGTTACGGTGGTGTATGGAAGGAGAATGAAAGAGATTATGAGGGTGGCTATTTAGCAGGATTGGATGTGAATATTGACATAAGGTATGAAGAGTTTTT
AAGAGAGCTGTATAACGTGAGTGGCATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGATA
GAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCTAAATTGCCGTTATACTTATCAATGATTTCGAAAGATGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGC
CATATACCACACACTCTCTCACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTCGTATCA
TCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATTTGTATA
CTGGTGACGATACACTTAATTACGAGGAACAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAA
TCTGAAGCAGATGAATTTGAGGAAGTAGATGGAGTTGAGGCAGATGAACCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGAGATGGA
GATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAATACAACAAGTTCATAAGTGCGGTCGATGTG
GTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGGGCGGGATCCCTTTGTTCAAGCCCCGGAGTCAGCACTTAAGGGAACAACCTCTCTACTATCCCTTATTCGGGTAGGAGTGAATTCCTTCTTGCACGACTATGT
CCCCAGCTATCTACCCGTTCCTATCCCTGAAATGGGAGGCTTATTGAGTCGGCGATACCGAGCCACTCTCACCTATGCAGATCTAAGGATAAGCCCGAATAAACAGGAGT
TCATAGACGCCCCCACTCGCATGTCTCTACATGGACGATTTAGGATCACATCGTCTATACCATCTATAAAGTGGGCCGCGTCTCATAGTGTCCCCAGAATAAGAATGCCT
CGAATCTTTGTGTGTTACGGTGGTGTATGGAAGGAGAATGAAAGAGATTATGAGGGTGGCTATTTAGCAGGATTGGATGTGAATATTGACATAAGGTATGAAGAGTTTTT
AAGAGAGCTGTATAACGTGAGTGGCATTAACCCCGATCAGTTTGACCTTATAATAAGATGTCTATACAATTTTGGATCAAGAGTTCCTACTTATTTGATTAGAAATGATA
GAGAATTAAGATTCTTTCTAAGCGGAGAGGATGCATCTAAATTGCCGTTATACTTATCAATGATTTCGAAAGATGTCCATGGTAGTGGCAGTAACTTAGGTAGTCATAGC
CATATACCACACACTCTCTCACAACCTTTTCCACAACCGCCACCATCATTTGCACAAACTGTACCCTACAATTTGGCCGAAAACATACCATCATCCATTCCCTCGTATCA
TCCGACATATGATAACGTATCATCACCAACCCCTATAAGTAATACTTTTGTCCCACTAGACTTAGCCGATGATAATACACCAAATTTTGGGATTGAAGAGAATTTGTATA
CTGGTGACGATACACTTAATTACGAGGAACAAGAGTATGATGAAGAGGAAGATGAAAATTGGGAATACAACGAGGAGGATGAAGAATTAGATGAATCATACGAAGAAGAA
TCTGAAGCAGATGAATTTGAGGAAGTAGATGGAGTTGAGGCAGATGAACCGATATATCCTGTTGGCCCTATGTCTGAGTGGAAGAGACCCGCTGAATTTCAAGAGATGGA
GATATTGCCGCCAAAAAGGGTTGCTCGAGTTGGTCGCCGACGGACTGTTCGAATACCATCTGCAGGGGAGAGACCTCAAATACAACAAGTTCATAAGTGCGGTCGATGTG
GTAACATAGGTCATAACCGCAAAACTTGTCGTGAACCGCTCTCAACGACATGA
Protein sequenceShow/hide protein sequence
MRGRDPFVQAPESALKGTTSLLSLIRVGVNSFLHDYVPSYLPVPIPEMGGLLSRRYRATLTYADLRISPNKQEFIDAPTRMSLHGRFRITSSIPSIKWAASHSVPRIRMP
RIFVCYGGVWKENERDYEGGYLAGLDVNIDIRYEEFLRELYNVSGINPDQFDLIIRCLYNFGSRVPTYLIRNDRELRFFLSGEDASKLPLYLSMISKDVHGSGSNLGSHS
HIPHTLSQPFPQPPPSFAQTVPYNLAENIPSSIPSYHPTYDNVSSPTPISNTFVPLDLADDNTPNFGIEENLYTGDDTLNYEEQEYDEEEDENWEYNEEDEELDESYEEE
SEADEFEEVDGVEADEPIYPVGPMSEWKRPAEFQEMEILPPKRVARVGRRRTVRIPSAGERPQIQQVHKCGRCGNIGHNRKTCREPLSTT