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Spg003476 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003476
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTrafficking protein particle complex subunit
Genome locationscaffold4:43708461..43712746
RNA-Seq ExpressionSpg003476
SyntenySpg003476
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR007233 - Trafficking protein particle complex subunit
IPR011012 - Longin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61053.2 hypothetical protein Csa_021294 [Cucumis sativus]4.5e-7396.45Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSP+AGCSG+ELLEADTFDLHCFQSLTGTKFFVVCEPGTQHME LLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR
        LYTDFVLKNPFYEMEMPIRCELFDINL+QAVQKDRVALL R
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR

XP_004144741.1 trafficking protein particle complex subunit 4 [Cucumis sativus]4.5e-7396.45Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSP+AGCSG+ELLEADTFDLHCFQSLTGTKFFVVCEPGTQHME LLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR
        LYTDFVLKNPFYEMEMPIRCELFDINL+QAVQKDRVALL R
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR

XP_008453237.1 PREDICTED: trafficking protein particle complex subunit 4 [Cucumis melo]1.3e-7295.74Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSP+AGCSG+ELLEADTFDLHCFQSLTGTKFFVVCEPGTQHME LLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR
        LYTDFVLKNPFYEMEMPIRCELFDINL+QAVQK+RVALL R
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR

XP_022156391.1 trafficking protein particle complex subunit 4 [Momordica charantia]2.0e-7397.16Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSP++GCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR
        LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVAL  R
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR

XP_041018648.1 trafficking protein particle complex subunit 4 [Juglans microcarpa x Juglans regia]1.3e-7297.16Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLK IYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR
        LYTD+VLKNPFYEMEMPIRCELFDINL+QAVQKDRVALL R
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR

TrEMBL top hitse value%identityAlignment
A0A0A0LJ20 Trafficking protein particle complex subunit2.2e-7396.45Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSP+AGCSG+ELLEADTFDLHCFQSLTGTKFFVVCEPGTQHME LLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR
        LYTDFVLKNPFYEMEMPIRCELFDINL+QAVQKDRVALL R
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR

A0A1S3BVQ7 Trafficking protein particle complex subunit6.3e-7395.74Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSP+AGCSG+ELLEADTFDLHCFQSLTGTKFFVVCEPGTQHME LLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR
        LYTDFVLKNPFYEMEMPIRCELFDINL+QAVQK+RVALL R
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR

A0A2I4EAS4 Trafficking protein particle complex subunit4.1e-7296.45Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEP TQHMEGLLK IYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR
        LYTD+VLKNPFYEMEMPIRCELFDINL+QAVQKDRVALL R
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR

A0A5A7TWY1 Trafficking protein particle complex subunit6.3e-7395.74Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSP+AGCSG+ELLEADTFDLHCFQSLTGTKFFVVCEPGTQHME LLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR
        LYTDFVLKNPFYEMEMPIRCELFDINL+QAVQK+RVALL R
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR

A0A6J1DUU4 Trafficking protein particle complex subunit9.8e-7497.16Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE
        MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSP++GCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR
        LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVAL  R
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR

SwissProt top hitse value%identityAlignment
Q2TBL9 Trafficking protein particle complex subunit 42.0e-3158.49Show/hide
Query:  RMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN
        R+ +N+ L +AS++HS+ AI  QLSP  G SGIE+LE DTF LHCFQ+LTG KF V+ +P    ++ LL+ IYE+Y+DF LKNPFY +EMPIRCELFD N
Subjt:  RMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN

Query:  LSQAVQ
        L  A++
Subjt:  LSQAVQ

Q54UU1 Trafficking protein particle complex subunit 41.9e-3452.76Show/hide
Query:  IYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAG-CSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELY
        I S+YI+NK+G LI+  D+G+  ++  N  +R+ S +HS+HAI+  LSPV+G  SGIE++E + F L CFQ+ TG KF+V+ +P  Q +E LL  +YELY
Subjt:  IYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAG-CSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELY

Query:  TDFVLKNPFYEMEMPIRCELFDINLSQ
        TD+VLKNPFYE+EM IRC+LFD  L++
Subjt:  TDFVLKNPFYEMEMPIRCELFDINLSQ

Q69BT7 Trafficking protein particle complex subunit 42.0e-3158.49Show/hide
Query:  RMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN
        R+ +N+ L +AS++HS+ AI  QLSP  G SGIE+LE DTF LHCFQ+LTG KF V+ +P    ++ LL+ IYE+Y+DF LKNPFY +EMPIRCELFD N
Subjt:  RMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN

Query:  LSQAVQ
        L  A++
Subjt:  LSQAVQ

Q9ES56 Trafficking protein particle complex subunit 42.0e-3158.49Show/hide
Query:  RMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN
        R+ +N+ L +AS++HS+ AI  QLSP  G SGIE+LE DTF LHCFQ+LTG KF V+ +P    ++ LL+ IYE+Y+DF LKNPFY +EMPIRCELFD N
Subjt:  RMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN

Query:  LSQAVQ
        L  A++
Subjt:  LSQAVQ

Q9Y296 Trafficking protein particle complex subunit 44.4e-3157.55Show/hide
Query:  RMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN
        R+ +N+ L +AS++HS+ AI  QLSP  G SGIE+LE DTF LHC+Q+LTG KF V+ +P    ++ LL+ IYE+Y+DF LKNPFY +EMPIRCELFD N
Subjt:  RMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDFVLKNPFYEMEMPIRCELFDIN

Query:  LSQAVQ
        L  A++
Subjt:  LSQAVQ

Arabidopsis top hitse value%identityAlignment
AT1G51160.1 SNARE-like superfamily protein2.3e-1127.78Show/hide
Query:  YSLYIINKSGGLIFYKDYGSAGRM--DTNDSLRVASLWHSMHAISQQLSPV--------------AGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGT
        + +Y+ N++G  + YK++           D   +  L  S+ +++ ++ PV               GCS       +T+ L   ++ +G K  +V  P T
Subjt:  YSLYIINKSGGLIFYKDYGSAGRM--DTNDSLRVASLWHSMHAISQQLSPV--------------AGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGT

Query:  QHMEGLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLSQAVQ
          +   LKYIY LY ++V+KNP Y    PI+ ELF+  L Q V+
Subjt:  QHMEGLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLSQAVQ

AT1G51160.2 SNARE-like superfamily protein2.3e-1127.78Show/hide
Query:  YSLYIINKSGGLIFYKDYGSAGRM--DTNDSLRVASLWHSMHAISQQLSPV--------------AGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGT
        + +Y+ N++G  + YK++           D   +  L  S+ +++ ++ PV               GCS       +T+ L   ++ +G K  +V  P T
Subjt:  YSLYIINKSGGLIFYKDYGSAGRM--DTNDSLRVASLWHSMHAISQQLSPV--------------AGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGT

Query:  QHMEGLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLSQAVQ
          +   LKYIY LY ++V+KNP Y    PI+ ELF+  L Q V+
Subjt:  QHMEGLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLSQAVQ

AT5G02280.1 SNARE-like superfamily protein1.5e-7190.78Show/hide
Query:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE
        MAAIYSLYIINKSGGLIFYKD G+ GRMDTNDSLRVASLWHSMHAISQQLSPV GCSGIELLEADTFDLHCFQSL GTKFFVVCEPGT HME LL+YIYE
Subjt:  MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYE

Query:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR
        LYTD+VLKNPFYE+EMPIRCELFDINL+QAVQ DRVALL R
Subjt:  LYTDFVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAATTTACAGTCTCTACATCATCAACAAATCTGGTGGTTTGATCTTCTACAAGGATTATGGGTCTGCTGGACGAATGGACACAAACGATAGCTTGAGAGTGGC
GAGTTTATGGCATTCGATGCATGCCATTTCCCAGCAGCTTTCGCCTGTAGCCGGTTGTTCGGGTATTGAACTCCTTGAAGCCGATACATTCGACCTCCATTGCTTCCAGT
CACTTACTGGGACAAAGTTTTTTGTCGTGTGTGAACCTGGGACACAGCACATGGAGGGTCTTCTGAAATACATTTATGAGTTATACACAGATTTTGTCTTGAAGAATCCA
TTCTATGAGATGGAGATGCCTATACGTTGTGAGCTCTTTGACATCAACCTATCACAGGCAGTGCAAAAGGATCGTGTTGCTTTGCTTGCCCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCAATTTACAGTCTCTACATCATCAACAAATCTGGTGGTTTGATCTTCTACAAGGATTATGGGTCTGCTGGACGAATGGACACAAACGATAGCTTGAGAGTGGC
GAGTTTATGGCATTCGATGCATGCCATTTCCCAGCAGCTTTCGCCTGTAGCCGGTTGTTCGGGTATTGAACTCCTTGAAGCCGATACATTCGACCTCCATTGCTTCCAGT
CACTTACTGGGACAAAGTTTTTTGTCGTGTGTGAACCTGGGACACAGCACATGGAGGGTCTTCTGAAATACATTTATGAGTTATACACAGATTTTGTCTTGAAGAATCCA
TTCTATGAGATGGAGATGCCTATACGTTGTGAGCTCTTTGACATCAACCTATCACAGGCAGTGCAAAAGGATCGTGTTGCTTTGCTTGCCCGATGA
Protein sequenceShow/hide protein sequence
MAAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVAGCSGIELLEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKYIYELYTDFVLKNP
FYEMEMPIRCELFDINLSQAVQKDRVALLAR