| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG7030510.1 Mediator of RNA polymerase II transcription subunit 20a, partial [Cucurbita argyrosperma subsp. argyrosperma] | 2.0e-75 | 77.34 | Show/hide |
Query: NIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNS
NI A EFPR+FLGIS+PEQPNKYYLIIRGQRIVLEADF+I IMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME
Subjt: NIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNS
Query: VLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQA
IEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRF HIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ+
Subjt: VLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQA
Query: VRN
RN
Subjt: VRN
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| XP_004141069.1 mediator of RNA polymerase II transcription subunit 20a [Cucumis sativus] | 2.5e-75 | 76.96 | Show/hide |
Query: ENIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVN
+N PAAEFPR+FLGISLPEQPNKYYLIIRGQRIVLEADF+I IMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME
Subjt: ENIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVN
Query: SVLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
IEYLPISSMEKSRQVMEEFF+VWQEAMSKSSLPGRF HIE NFAEYGLSDYYTSQHTAVQY NVMAQLIATVQAVQ
Subjt: SVLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
Query: AVRN
+ RN
Subjt: AVRN
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| XP_008459711.1 PREDICTED: mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Cucumis melo] | 8.2e-74 | 75 | Show/hide |
Query: ENIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVN
+N PAAEFPR+FLGISLPEQPNKYYLIIRGQRIVLEADF+I IMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME
Subjt: ENIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVN
Query: SVLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
IEYLPISSMEKSRQ+M+EFF+VWQEAMSKSSLPGRF HIE NFAEYGLSD+YT QHTAVQY NVMAQLIATVQAVQ
Subjt: SVLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
Query: AVRN
+ RN
Subjt: AVRN
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| XP_022946745.1 mediator of RNA polymerase II transcription subunit 20a-like [Cucurbita moschata] | 2.0e-75 | 77.34 | Show/hide |
Query: NIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNS
NI A EFPR+FLGIS+PEQPNKYYLIIRGQRIVLEADF+I IMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME
Subjt: NIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNS
Query: VLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQA
IEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRF HIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ+
Subjt: VLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQA
Query: VRN
RN
Subjt: VRN
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| XP_038889134.1 mediator of RNA polymerase II transcription subunit 20a-like isoform X1 [Benincasa hispida] | 4.6e-77 | 77.94 | Show/hide |
Query: ENIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVN
+N+PAAEFPR+FLGISLPEQPNKYYLIIRGQRIVLEADF+I IMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME
Subjt: ENIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVN
Query: SVLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
IEYLPISSMEKSR+VMEEFFEVWQEAMSKSSLPGRF HIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
Subjt: SVLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
Query: AVRN
+ RN
Subjt: AVRN
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|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LHQ1 Mediator of RNA polymerase II transcription subunit 20 | 1.2e-75 | 76.96 | Show/hide |
Query: ENIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVN
+N PAAEFPR+FLGISLPEQPNKYYLIIRGQRIVLEADF+I IMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME
Subjt: ENIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVN
Query: SVLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
IEYLPISSMEKSRQVMEEFF+VWQEAMSKSSLPGRF HIE NFAEYGLSDYYTSQHTAVQY NVMAQLIATVQAVQ
Subjt: SVLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
Query: AVRN
+ RN
Subjt: AVRN
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| A0A1S3CAW6 Mediator of RNA polymerase II transcription subunit 20 | 4.0e-74 | 75 | Show/hide |
Query: ENIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVN
+N PAAEFPR+FLGISLPEQPNKYYLIIRGQRIVLEADF+I IMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME
Subjt: ENIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVN
Query: SVLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
IEYLPISSMEKSRQ+M+EFF+VWQEAMSKSSLPGRF HIE NFAEYGLSD+YT QHTAVQY NVMAQLIATVQAVQ
Subjt: SVLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
Query: AVRN
+ RN
Subjt: AVRN
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| A0A5D3CH02 Mediator of RNA polymerase II transcription subunit 20 | 4.0e-74 | 75 | Show/hide |
Query: ENIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVN
+N PAAEFPR+FLGISLPEQPNKYYLIIRGQRIVLEADF+I IMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME
Subjt: ENIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVN
Query: SVLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
IEYLPISSMEKSRQ+M+EFF+VWQEAMSKSSLPGRF HIE NFAEYGLSD+YT QHTAVQY NVMAQLIATVQAVQ
Subjt: SVLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
Query: AVRN
+ RN
Subjt: AVRN
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| A0A6J1G4U3 Mediator of RNA polymerase II transcription subunit 20 | 9.4e-76 | 77.34 | Show/hide |
Query: NIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNS
NI A EFPR+FLGIS+PEQPNKYYLIIRGQRIVLEADF+I IMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME
Subjt: NIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNS
Query: VLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQA
IEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRF HIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ+
Subjt: VLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQA
Query: VRN
RN
Subjt: VRN
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| A0A6J1KEU1 Mediator of RNA polymerase II transcription subunit 20 | 9.4e-76 | 77.34 | Show/hide |
Query: NIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNS
NI A EFPR+FLGIS+PEQPNKYYLIIRGQRIVLEADF+I IMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPN+SENLRGIVME
Subjt: NIPAAEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNS
Query: VLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQA
IEYLPISSMEKS+QVMEEFFEVWQEAMSKSSLPGRF HIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ+
Subjt: VLVLLHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQA
Query: VRN
RN
Subjt: VRN
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|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q54FL3 Putative mediator of RNA polymerase II transcription subunit 20 | 1.3e-05 | 37.35 | Show/hide |
Query: PREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEV
PREF + E+P K + + R ++E D +++I+EK SYK R +Y+LGDF +RVG +V +RGI++EV
Subjt: PREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEV
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| Q6NPF4 Mediator of RNA polymerase II transcription subunit 20a | 2.5e-57 | 62.37 | Show/hide |
Query: EFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNSVLVLL
EFPR+FLGISL +QPNKYY IIR QRIVLEAD SI IMEKLQSYK +VAL F+GFQYQLGDF+LRVGKVVP HSEN+RGIVMEV
Subjt: EFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNSVLVLL
Query: HALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
EYLPISSMEK+++VMEEF E+W EA++K SLPG+F +I+ NF E+GL D YT QHTAV+YA VMA +IATVQAV+
Subjt: HALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
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| Q9M0S0 Mediator of RNA polymerase II transcription subunit 20b | 7.8e-51 | 55.44 | Show/hide |
Query: AEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNSVLVL
AEFPREF+GISLPE+P+KYY +IR QRIV+EAD SI IME LQSYK +++ FEG +YQLGDF+LRVGKVVP H+E +RG+VMEV
Subjt: AEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNSVLVL
Query: LHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQA
EYLPISSM ++++MEEF E+WQEAMSK SLPG+F + E NF ++GL D YT QHTAV YA MA L+A +QA
Subjt: LHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQA
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|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G28020.1 BEST Arabidopsis thaliana protein match is: TATA-binding related factor (TRF) of subunit 20 of Mediator complex (TAIR:AT2G28230.1) | 6.4e-16 | 63.24 | Show/hide |
Query: MEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQ-YANVMAQLIATVQAV
ME +R+VMEEF E+W EA++K SLPG+F + + NF E+GL D YT QHTAV+ YA VMA +IATVQAV
Subjt: MEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQ-YANVMAQLIATVQAV
|
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| AT2G28230.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex | 1.8e-58 | 62.37 | Show/hide |
Query: EFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNSVLVLL
EFPR+FLGISL +QPNKYY IIR QRIVLEAD SI IMEKLQSYK +VAL F+GFQYQLGDF+LRVGKVVP HSEN+RGIVMEV
Subjt: EFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNSVLVLL
Query: HALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
EYLPISSMEK+++VMEEF E+W EA++K SLPG+F +I+ NF E+GL D YT QHTAV+YA VMA +IATVQAV+
Subjt: HALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQAVQ
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| AT4G09070.1 TATA-binding related factor (TRF) of subunit 20 of Mediator complex | 5.5e-52 | 55.44 | Show/hide |
Query: AEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNSVLVL
AEFPREF+GISLPE+P+KYY +IR QRIV+EAD SI IME LQSYK +++ FEG +YQLGDF+LRVGKVVP H+E +RG+VMEV
Subjt: AEFPREFLGISLPEQPNKYYLIIRGQRIVLEADFSILTIMEKLQSYKLRVALNFEGFQYQLGDFQLRVGKVVPNHSENLRGIVMEVRLISSFHVNSVLVL
Query: LHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQA
EYLPISSM ++++MEEF E+WQEAMSK SLPG+F + E NF ++GL D YT QHTAV YA MA L+A +QA
Subjt: LHALLVDSLLSLLGLDSLMIEYLPISSMEKSRQVMEEFFEVWQEAMSKSSLPGRFKHIEPNFAEYGLSDYYTSQHTAVQYANVMAQLIATVQA
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