; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003479 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003479
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionANK_REP_REGION domain-containing protein
Genome locationscaffold4:46401723..46402382
RNA-Seq ExpressionSpg003479
SyntenySpg003479
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002110 - Ankyrin repeat
IPR026961 - PGG domain
IPR036770 - Ankyrin repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063583.1 protein ACCELERATED CELL DEATH 6-like [Cucumis melo var. makuwa]6.8e-1658.62Show/hide
Query:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL
        F++PGG     E+ GL+ L+NK  FKVFV+FNT+AFCCS FAVL+HF  S+  H  RV Y GIA +FT+IAI+AMV+AF  GT+VV+
Subjt:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL

XP_011648740.1 protein ACCELERATED CELL DEATH 6 [Cucumis sativus]3.0e-1659.77Show/hide
Query:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL
        F++PGG     E+ GL+ L+NK  FKVFV+FNT+AFCCS FAVL+HF  S+  H  RV Y GIA +FT+IAI+AMV+AF  GTYVV+
Subjt:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL

XP_022143167.1 ankyrin repeat-containing protein At5g02620-like [Momordica charantia]1.2e-2065.17Show/hide
Query:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVLTK
        FTVPGG +++GE  GLA LT KP+F VF V N+ AFCCS FAVL+ F  ++  H ARV YKG+AAS T  AILAMVLAFC G+YVVLTK
Subjt:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVLTK

XP_022143167.1 ankyrin repeat-containing protein At5g02620-like [Momordica charantia]2.4e-0553.33Show/hide
Query:  ECPLLLEQANDSGDTALHIAARENYVDMVAFFIEYLQGTDIETGQSKRLKELLRKQSRAK
        +CP LL Q N SGDTALHIAARE   D+V  FI   +  D  TG+SK L+EL+R+ +  K
Subjt:  ECPLLLEQANDSGDTALHIAARENYVDMVAFFIEYLQGTDIETGQSKRLKELLRKQSRAK

XP_022143167.1 ankyrin repeat-containing protein At5g02620-like [Momordica charantia]2.1e-1760Show/hide
Query:  FTVPGGLV-NNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISL----------KYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVLTK
        FTVPGG + +NGED+GLA LT KPAFKVF+VFNTLAFCCS FAVL     SL          + H  RV Y  I A FT +AILA+VLAF  GT+VVLT+
Subjt:  FTVPGGLV-NNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISL----------KYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVLTK

XP_022143169.1 ankyrin-2-like [Momordica charantia]2.4e-0554.24Show/hide
Query:  CPLLLEQANDSGDTALHIAARENYVDMVAFFIEYLQGTDIETGQSKRLKELLRKQSRAK
        CP LL + N SGDTALHIAAR+  +D+V  FI   +  D  TG+SK LK LLR  +R K
Subjt:  CPLLLEQANDSGDTALHIAARENYVDMVAFFIEYLQGTDIETGQSKRLKELLRKQSRAK

XP_022143169.1 ankyrin-2-like [Momordica charantia]2.3e-1659.77Show/hide
Query:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL
        F++PGG     E+ GL+ L+NK  FKVFV+FNT+AFCCS FAVL+HF  S+  H  RV Y GIA +FT+IAI+AMV+AF  GTYVV+
Subjt:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL

TrEMBL top hitse value%identityAlignment
A0A0A0LIB0 ANK_REP_REGION domain-containing protein1.5e-1659.77Show/hide
Query:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL
        F++PGG     E+ GL+ L+NK  FKVFV+FNT+AFCCS FAVL+HF  S+  H  RV Y GIA +FT+IAI+AMV+AF  GTYVV+
Subjt:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL

A0A5A7V660 Protein ACCELERATED CELL DEATH 6-like3.3e-1658.62Show/hide
Query:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL
        F++PGG     E+ GL+ L+NK  FKVFV+FNT+AFCCS FAVL+HF  S+  H  RV Y GIA +FT+IAI+AMV+AF  GT+VV+
Subjt:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL

A0A6J1CNI9 ankyrin-2-like1.2e-0554.24Show/hide
Query:  CPLLLEQANDSGDTALHIAARENYVDMVAFFIEYLQGTDIETGQSKRLKELLRKQSRAK
        CP LL + N SGDTALHIAAR+  +D+V  FI   +  D  TG+SK LK LLR  +R K
Subjt:  CPLLLEQANDSGDTALHIAARENYVDMVAFFIEYLQGTDIETGQSKRLKELLRKQSRAK

A0A6J1CNI9 ankyrin-2-like1.1e-1659.77Show/hide
Query:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL
        F++PGG     E+ GL+ L+NK  FKVFV+FNT+AFCCS FAVL+HF  S+  H  RV Y GIA +FT+IAI+AMV+AF  GTYVV+
Subjt:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL

A0A6J1CQ03 ankyrin repeat-containing protein At5g02620-like5.8e-2165.17Show/hide
Query:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVLTK
        FTVPGG +++GE  GLA LT KP+F VF V N+ AFCCS FAVL+ F  ++  H ARV YKG+AAS T  AILAMVLAFC G+YVVLTK
Subjt:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVLTK

A0A6J1CQ03 ankyrin repeat-containing protein At5g02620-like1.2e-0553.33Show/hide
Query:  ECPLLLEQANDSGDTALHIAARENYVDMVAFFIEYLQGTDIETGQSKRLKELLRKQSRAK
        +CP LL Q N SGDTALHIAARE   D+V  FI   +  D  TG+SK L+EL+R+ +  K
Subjt:  ECPLLLEQANDSGDTALHIAARENYVDMVAFFIEYLQGTDIETGQSKRLKELLRKQSRAK

A0A6J1CQ03 ankyrin repeat-containing protein At5g02620-like1.0e-1760Show/hide
Query:  FTVPGGLV-NNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISL----------KYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVLTK
        FTVPGG + +NGED+GLA LT KPAFKVF+VFNTLAFCCS FAVL     SL          + H  RV Y  I A FT +AILA+VLAF  GT+VVLT+
Subjt:  FTVPGGLV-NNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISL----------KYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVLTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G03460.1 Ankyrin repeat family protein3.4e-0534.48Show/hide
Query:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL
        FT+PGG   +  + G+ATL  K AF+VF+VF+TLA  CS   ++      L      +    +A     +A+ +M +AF  GTY  +
Subjt:  FTVPGGLVNNGEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCCACACAATTCCACCAGACTGAGTTTGCAAGAACTTTGGTGTCGGGAATGTCCGTTGCTTCTCGAGCAGGCGAACGACTCGGGTGACACTGCTCTGCACATCGC
AGCAAGGGAGAACTACGTAGATATGGTTGCCTTTTTCATCGAGTATCTCCAAGGGACTGATATTGAAACTGGACAGTCTAAACGTCTCAAAGAGCTTTTGAGAAAACAAA
GCAGAGCGAAGAAGGGCGGATTTTGGAGAAGAAACTGCACTAGAAGTGAACCTATTGGTGGCAACGCTAGTGGCCACAGATTCACCGTGCCCGGTGGGTTGGTCAATAAC
GGAGAAGACGAAGGGCTAGCCACTCTCACCAACAAACCAGCTTTCAAGGTGTTCGTAGTTTTCAACACTTTGGCATTTTGTTGCTCGACTTTTGCAGTGCTTGTTCACTT
CGCCATCTCACTCAAATACCACGGAGCTCGAGTATATTATAAAGGGATTGCAGCATCCTTCACCGCTATTGCCATTCTTGCGATGGTGTTGGCATTTTGCTTTGGCACTT
ACGTTGTGCTTACAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCCACACAATTCCACCAGACTGAGTTTGCAAGAACTTTGGTGTCGGGAATGTCCGTTGCTTCTCGAGCAGGCGAACGACTCGGGTGACACTGCTCTGCACATCGC
AGCAAGGGAGAACTACGTAGATATGGTTGCCTTTTTCATCGAGTATCTCCAAGGGACTGATATTGAAACTGGACAGTCTAAACGTCTCAAAGAGCTTTTGAGAAAACAAA
GCAGAGCGAAGAAGGGCGGATTTTGGAGAAGAAACTGCACTAGAAGTGAACCTATTGGTGGCAACGCTAGTGGCCACAGATTCACCGTGCCCGGTGGGTTGGTCAATAAC
GGAGAAGACGAAGGGCTAGCCACTCTCACCAACAAACCAGCTTTCAAGGTGTTCGTAGTTTTCAACACTTTGGCATTTTGTTGCTCGACTTTTGCAGTGCTTGTTCACTT
CGCCATCTCACTCAAATACCACGGAGCTCGAGTATATTATAAAGGGATTGCAGCATCCTTCACCGCTATTGCCATTCTTGCGATGGTGTTGGCATTTTGCTTTGGCACTT
ACGTTGTGCTTACAAAATGA
Protein sequenceShow/hide protein sequence
MSPHNSTRLSLQELWCRECPLLLEQANDSGDTALHIAARENYVDMVAFFIEYLQGTDIETGQSKRLKELLRKQSRAKKGGFWRRNCTRSEPIGGNASGHRFTVPGGLVNN
GEDEGLATLTNKPAFKVFVVFNTLAFCCSTFAVLVHFAISLKYHGARVYYKGIAASFTAIAILAMVLAFCFGTYVVLTK