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Spg003481 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003481
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein indeterminate-domain 11
Genome locationscaffold4:48231451..48231785
RNA-Seq ExpressionSpg003481
SyntenySpg003481
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR022755 - Zinc finger, double-stranded RNA binding
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEE58506.1 hypothetical protein OsJ_09778 [Oryza sativa Japonica Group]9.1e-1853.4Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKESLLPE
        E+IALSPKTLL T+R VCEICNKGFQRDQNLQLHRRGHNLPWKL QR+ K                                FCRKH EKKW  +    E
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKESLLPE

Query:  ARR
         RR
Subjt:  ARR

KAA3451690.1 protein indeterminate-domain 12-like [Gossypium australe]7.0e-1853.06Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKESLL
        E+IALSPKTLL T+R +CEICNKGFQRDQNLQLHRRGHNLPWKL QR  K                                +CRKH EKKW K+S +
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKESLL

KAG5248626.1 zinc finger protein [Salix suchowensis]5.4e-1865.79Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRT----------------RKFCRKHDEKKW
        E+IALSPKTL+ T+R VCEIC KGFQRDQNLQLHRRGHNLPWKL QRT                + FCRKH EKKW
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRT----------------RKFCRKHDEKKW

RVW52024.1 Protein indeterminate-domain 11 [Vitis vinifera]2.4e-1879.37Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRKFCR---KHDEKKW
        E+IALSPKTL+ T+R VCEICNKGFQRDQNLQLHRRGHNLPWKL QRT K  R   KH EKKW
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRKFCR---KHDEKKW

TYJ21619.1 hypothetical protein E1A91_A08G074900v1 [Gossypium mustelinum]4.8e-1976.19Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRKFCRKHDEKKWNKE
        E+IALSPKTLL T+R VCE+CNKGFQRDQNLQLHRRGHNLPWKL QR+++  +KH EKKW  E
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRKFCRKHDEKKWNKE

TrEMBL top hitse value%identityAlignment
A0A0B0MZL0 Zinc finger MAGPIE-like protein7.5e-1855.21Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK---------------------------------FCRKHDEKKWNKE
        E+IALSPKTLL T+R +CEICNKGFQRDQNLQLHRRGHNLPWKL QRT+K                                 FCRKH EKKW  E
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK---------------------------------FCRKHDEKKWNKE

A0A438EWE7 Protein indeterminate-domain 111.2e-1879.37Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRKFCR---KHDEKKW
        E+IALSPKTL+ T+R VCEICNKGFQRDQNLQLHRRGHNLPWKL QRT K  R   KH EKKW
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRKFCR---KHDEKKW

A0A5B6U195 Protein indeterminate-domain 12-like3.4e-1853.06Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKESLL
        E+IALSPKTLL T+R +CEICNKGFQRDQNLQLHRRGHNLPWKL QR  K                                +CRKH EKKW K+S +
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKESLL

A0A5D2Y726 C2H2-type domain-containing protein2.3e-1976.19Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRKFCRKHDEKKWNKE
        E+IALSPKTLL T+R VCE+CNKGFQRDQNLQLHRRGHNLPWKL QR+++  +KH EKKW  E
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRKFCRKHDEKKWNKE

B9F5Q2 C2H2-type domain-containing protein4.4e-1853.4Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKESLLPE
        E+IALSPKTLL T+R VCEICNKGFQRDQNLQLHRRGHNLPWKL QR+ K                                FCRKH EKKW  +    E
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKESLLPE

Query:  ARR
         RR
Subjt:  ARR

SwissProt top hitse value%identityAlignment
O22759 Protein indeterminate-domain 123.0e-1954.17Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK---------------------------------FCRKHDEKKWNKE
        E+IALSPKTLL T+R VCEICNKGFQRDQNLQLHRRGHNLPWKL Q+  K                                 FCRKH EKKW  E
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK---------------------------------FCRKHDEKKWNKE

Q9LRW7 Protein indeterminate-domain 111.3e-1954.84Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK---------------------------------FCRKHDEKKW
        E+IALSPKTL+ T+R VCEICNKGFQRDQNLQLHRRGHNLPWKL QR+ K                                 FCRKH EKKW
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK---------------------------------FCRKHDEKKW

Q9LVQ7 Zinc finger protein ENHYDROUS1.3e-1954.74Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKE
        E+IALSPKTL+ T+R VCEICNKGFQRDQNLQLHRRGHNLPWKL QR+ K                                FCRKH EKKW  E
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKE

Q9SCQ6 Zinc finger protein GAI-ASSOCIATED FACTOR 11.3e-1955.43Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKW
        E+IALSPKTLL T+R VCEICNKGFQRDQNLQLHRRGHNLPWKL Q++ K                                FCRKH EKKW
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKW

Q9ZWA6 Zinc finger protein MAGPIE5.0e-1953.68Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKE
        E+IALSPKTL+ T+R +CEIC KGFQRDQNLQLHRRGHNLPWKL QRT K                                FCRKH EKKW  E
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKE

Arabidopsis top hitse value%identityAlignment
AT3G13810.1 indeterminate(ID)-domain 119.4e-2154.84Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK---------------------------------FCRKHDEKKW
        E+IALSPKTL+ T+R VCEICNKGFQRDQNLQLHRRGHNLPWKL QR+ K                                 FCRKH EKKW
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK---------------------------------FCRKHDEKKW

AT3G13810.2 indeterminate(ID)-domain 119.4e-2154.84Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK---------------------------------FCRKHDEKKW
        E+IALSPKTL+ T+R VCEICNKGFQRDQNLQLHRRGHNLPWKL QR+ K                                 FCRKH EKKW
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK---------------------------------FCRKHDEKKW

AT3G13810.3 indeterminate(ID)-domain 119.4e-2154.84Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK---------------------------------FCRKHDEKKW
        E+IALSPKTL+ T+R VCEICNKGFQRDQNLQLHRRGHNLPWKL QR+ K                                 FCRKH EKKW
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK---------------------------------FCRKHDEKKW

AT3G50700.1 indeterminate(ID)-domain 29.4e-2155.43Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKW
        E+IALSPKTLL T+R VCEICNKGFQRDQNLQLHRRGHNLPWKL Q++ K                                FCRKH EKKW
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKW

AT5G66730.1 C2H2-like zinc finger protein9.4e-2154.74Show/hide
Query:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKE
        E+IALSPKTL+ T+R VCEICNKGFQRDQNLQLHRRGHNLPWKL QR+ K                                FCRKH EKKW  E
Subjt:  EIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRK--------------------------------FCRKHDEKKWNKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGAGATAATTGCTTTGTCTCCGAAGACCCTTTTGGTCACAAGTCGATCCGTTTGTGAAATTTGCAACAAAGGATTTCAAAGGGATCAGAATCTGCAACTTCATCG
GCGAGGTCACAATCTTCCATGGAAGCTCTGGCAACGGACGAGAAAGTTCTGCCGGAAGCACGACGAGAAGAAGTGGAATAAAGAATCACTTCTGCCGGAAGCACGACGAG
AAGAAGTGGAAGTGCGACGACTGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGAGATAATTGCTTTGTCTCCGAAGACCCTTTTGGTCACAAGTCGATCCGTTTGTGAAATTTGCAACAAAGGATTTCAAAGGGATCAGAATCTGCAACTTCATCG
GCGAGGTCACAATCTTCCATGGAAGCTCTGGCAACGGACGAGAAAGTTCTGCCGGAAGCACGACGAGAAGAAGTGGAATAAAGAATCACTTCTGCCGGAAGCACGACGAG
AAGAAGTGGAAGTGCGACGACTGCTCTAA
Protein sequenceShow/hide protein sequence
MPEIIALSPKTLLVTSRSVCEICNKGFQRDQNLQLHRRGHNLPWKLWQRTRKFCRKHDEKKWNKESLLPEARREEVEVRRLL