; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003503 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003503
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationscaffold4:46204484..46205759
RNA-Seq ExpressionSpg003503
SyntenySpg003503
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139237.1 pathogenesis-related protein PR-4A [Cucumis sativus]6.7e-6182.39Show/hide
Query:  MERGSL-MMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIV
        ME+GS+ M+L+L L +LSLANAQSA+NVRATYH YNPQ INWDY KASVYCATWDANKPLEWRRRY WTAFCGPVGPRGQASCGRCLKVTN ETKAST V
Subjt:  MERGSL-MMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIV

Query:  RIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC
        RIVDQCSNGGLDLD   F  IDTN NG   GHL VNYEFVNC
Subjt:  RIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC

XP_022143159.1 pathogenesis-related protein PR-4-like [Momordica charantia]1.3e-6482.98Show/hide
Query:  MERGSLMMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVR
        MERG L+MLVLGLCLL +ANAQSA+NVRATYH YNPQ INWDY +ASV+CATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCL+VTNTET+AS IVR
Subjt:  MERGSLMMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVR

Query:  IVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC
        IVDQC+NGGLDLD   F  IDTN NG ARGH+ VNY+FVNC
Subjt:  IVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC

XP_022946138.1 pathogenesis-related protein P2-like [Cucurbita moschata]1.4e-6182.14Show/hide
Query:  ERGSLMMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVRI
        +R  LM+L L L +LSLANAQSA+NVRATYH YNPQ INWDY +ASVYCATWDANKPLE+RRRYGWTAFCGPVGPRGQASCGRCL+VTNTET+AS IVRI
Subjt:  ERGSLMMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVRI

Query:  VDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC
        VDQCSNGGLDLD   F +IDTN+NG  RGHLIVNYEFVNC
Subjt:  VDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]4.0e-6180.28Show/hide
Query:  MERGS-LMMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIV
        ME+GS LM+L L L +LSLANAQSA+NVRATYH YNPQ INWDY +ASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCL+VTNTET AS IV
Subjt:  MERGS-LMMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIV

Query:  RIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC
        RIVDQC+NGGLDLD   F +IDTN NG+ RGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC

XP_038890575.1 pathogenesis-related protein PR-4-like [Benincasa hispida]4.7e-6282.39Show/hide
Query:  MERGSLMM-LVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIV
        ME+GS+MM LVL L +LS+ANAQSA+NVRATYH YNPQ INWDY +ASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCL+VTNTET ASTIV
Subjt:  MERGSLMM-LVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIV

Query:  RIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC
        RIVDQCSNGGLDLD   F ++DTN NG  RGHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LG76 Barwin domain-containing protein3.3e-6182.39Show/hide
Query:  MERGSL-MMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIV
        ME+GS+ M+L+L L +LSLANAQSA+NVRATYH YNPQ INWDY KASVYCATWDANKPLEWRRRY WTAFCGPVGPRGQASCGRCLKVTN ETKAST V
Subjt:  MERGSL-MMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIV

Query:  RIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC
        RIVDQCSNGGLDLD   F  IDTN NG   GHL VNYEFVNC
Subjt:  RIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like2.8e-6080.28Show/hide
Query:  MERGSLMM-LVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIV
        ME+GS+MM LVL L +LSLANAQSA+NVRATYH YNPQ INWDY +ASV+CATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCL+VTNTET AS IV
Subjt:  MERGSLMM-LVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIV

Query:  RIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC
        RIVDQC+NGGLDLD   F +IDTN NG  RGHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC

A0A6J1CNH9 pathogenesis-related protein PR-4-like6.4e-6582.98Show/hide
Query:  MERGSLMMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVR
        MERG L+MLVLGLCLL +ANAQSA+NVRATYH YNPQ INWDY +ASV+CATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCL+VTNTET+AS IVR
Subjt:  MERGSLMMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVR

Query:  IVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC
        IVDQC+NGGLDLD   F  IDTN NG ARGH+ VNY+FVNC
Subjt:  IVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC

A0A6J1G2Z1 pathogenesis-related protein P2-like6.6e-6282.14Show/hide
Query:  ERGSLMMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVRI
        +R  LM+L L L +LSLANAQSA+NVRATYH YNPQ INWDY +ASVYCATWDANKPLE+RRRYGWTAFCGPVGPRGQASCGRCL+VTNTET+AS IVRI
Subjt:  ERGSLMMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVRI

Query:  VDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC
        VDQCSNGGLDLD   F +IDTN+NG  RGHLIVNYEFVNC
Subjt:  VDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like1.9e-6180.28Show/hide
Query:  MERGS-LMMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIV
        ME+GS LM+L L L +LSLANAQSA+NVRATYH YNPQ INWDY +ASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCL+VTNTET AS IV
Subjt:  MERGS-LMMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIV

Query:  RIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC
        RIVDQC+NGGLDLD   F +IDTN NG+ RGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN12.5e-5072.27Show/hide
Query:  SASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVRIVDQCSNGGLDLDYGEFTKIDT
        SA NVRATYH YNPQ + WD N  S YC+TWDANKPL WR++YGWTAFCGPVGPRG+ SCG+CL+VTNT T A T VRIVDQCSNGGLDLD   F +IDT
Subjt:  SASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVRIVDQCSNGGLDLDYGEFTKIDT

Query:  NKNGIARGHLIVNYEFVNC
        + NG  +GHLIVNY+FV+C
Subjt:  NKNGIARGHLIVNYEFVNC

P09762 Wound-induced protein WIN26.1e-4971.43Show/hide
Query:  SASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVRIVDQCSNGGLDLDYGEFTKIDT
        SA NVRATYH YNPQ + WD N  S YC+TWDANKP  WR +YGWTAFCGPVGPRG+ SCG+CL+VTNT T A T VRIVDQCSNGGLDLD   F +IDT
Subjt:  SASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVRIVDQCSNGGLDLDYGEFTKIDT

Query:  NKNGIARGHLIVNYEFVNC
        +  G  +GHLIVNY+FVNC
Subjt:  NKNGIARGHLIVNYEFVNC

P29062 Pathogenesis-related protein PR-4A2.3e-5165.52Show/hide
Query:  MERGSLMMLVLGLCLLS----LANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKAS
        MER +   L + L ++S    +A AQSA+NVR+TYH YNPQ INWD   AS +CATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCL+VTNT T   
Subjt:  MERGSLMMLVLGLCLLS----LANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKAS

Query:  TIVRIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC
        T VRIVDQCSNGGLDLD   F ++DTN  G  +GHL VNYEFVNC
Subjt:  TIVRIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC

P29063 Pathogenesis-related protein PR-4B2.3e-5165.52Show/hide
Query:  MERGSLMMLVLGLCLLS----LANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKAS
        MER +   L + L ++S    +A AQSA+NVR+TYH YNPQ INWD   AS +CATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCL+VTNT T   
Subjt:  MERGSLMMLVLGLCLLS----LANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKAS

Query:  TIVRIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC
          VRIVDQCSNGGLDLD   F ++DTN  G  +GHLIVNYEFVNC
Subjt:  TIVRIVDQCSNGGLDLDYGEFTKIDTNKNGIARGHLIVNYEFVNC

P32045 Pathogenesis-related protein P22.0e-5273.23Show/hide
Query:  LLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVRIVDQCSNGGLDLDY
        ++++A AQSA+NVRATYH YNPQ INWD   ASVYCATWDA+KPLEWRRRYGWTAFCGP GP GQASCGRCL+VTNT T     VRIVDQC NGGLDLD 
Subjt:  LLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVRIVDQCSNGGLDLDY

Query:  GEFTKIDTNKNGIARGHLIVNYEFVNC
          F ++DTN  G  RG+L VNYEFVNC
Subjt:  GEFTKIDTNKNGIARGHLIVNYEFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 42.4e-4867.5Show/hide
Query:  QSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVRIVDQCSNGGLDLDYGEFTKID
        +SASNVRATYH+YNP   NWD    S YC+TWDA+KP  WR +YGWTAFCGP GPRGQASCG+CL+V NT T A+  VRIVDQCSNGGLDLD   F +ID
Subjt:  QSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVRIVDQCSNGGLDLDYGEFTKID

Query:  TNKNGIARGHLIVNYEFVNC
        T+  G  +GHLIV+Y+FV+C
Subjt:  TNKNGIARGHLIVNYEFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGGAAGTTTGATGATGTTGGTATTGGGTTTGTGCCTTCTCAGCTTGGCAAATGCTCAAAGTGCTTCAAATGTGAGGGCTACATATCATTATTACAATCCACA
AGCCATCAATTGGGATTACAATAAAGCAAGTGTTTATTGTGCGACATGGGATGCCAACAAGCCTTTGGAGTGGCGTCGTCGCTATGGTTGGACTGCCTTTTGTGGCCCTG
TCGGTCCTCGTGGTCAAGCTTCTTGTGGTCGCTGTTTGAAAGTGACCAATACCGAAACAAAGGCTTCAACAATAGTAAGGATTGTGGATCAATGTTCCAATGGAGGATTG
GATTTGGATTATGGCGAGTTTACGAAGATTGACACTAATAAAAATGGAATCGCTCGTGGCCATCTTATCGTCAACTATGAATTTGTCAATTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAGGAAGTTTGATGATGTTGGTATTGGGTTTGTGCCTTCTCAGCTTGGCAAATGCTCAAAGTGCTTCAAATGTGAGGGCTACATATCATTATTACAATCCACA
AGCCATCAATTGGGATTACAATAAAGCAAGTGTTTATTGTGCGACATGGGATGCCAACAAGCCTTTGGAGTGGCGTCGTCGCTATGGTTGGACTGCCTTTTGTGGCCCTG
TCGGTCCTCGTGGTCAAGCTTCTTGTGGTCGCTGTTTGAAAGTGACCAATACCGAAACAAAGGCTTCAACAATAGTAAGGATTGTGGATCAATGTTCCAATGGAGGATTG
GATTTGGATTATGGCGAGTTTACGAAGATTGACACTAATAAAAATGGAATCGCTCGTGGCCATCTTATCGTCAACTATGAATTTGTCAATTGTTAA
Protein sequenceShow/hide protein sequence
MERGSLMMLVLGLCLLSLANAQSASNVRATYHYYNPQAINWDYNKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLKVTNTETKASTIVRIVDQCSNGGL
DLDYGEFTKIDTNKNGIARGHLIVNYEFVNC