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Spg003506 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003506
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPathogenesis-related protein PR-4-like
Genome locationscaffold4:46215878..46218517
RNA-Seq ExpressionSpg003506
SyntenySpg003506
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063601.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa]8.5e-6479.72Show/hide
Query:  MEKGSLML--LALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQI
        M++GSL++  LALWASLLG   GQSASNV ATYN YNP +I WNY+TASVFCATWDA +PL WR+HYGWTAFCGPVGPTGRDSCG CLRV+NTETGD++ 
Subjt:  MEKGSLML--LALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQI

Query:  VRIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC
        VRIVDQCSNGGLDLDY VF+KLD+NGNG ARGHLIVDY FVNC
Subjt:  VRIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC

XP_004139241.1 pathogenesis-related protein PR-4 [Cucumis sativus]8.5e-6478.47Show/hide
Query:  MEKGSLML---LALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQ
        M++GSL++   LALWASLLG   GQSASNV ATYN YNP +I WNY+TASVFC+TWDA +PL WR+HYGWTAFCGPVGP+GR+SCG CLRV+NTETGD++
Subjt:  MEKGSLML---LALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQ

Query:  IVRIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC
         VRIVDQCSNGGLDLD+GVFQKLDTNGNG ARGHLIVDY FVNC
Subjt:  IVRIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]2.5e-5573.24Show/hide
Query:  MEKGS-LMLLALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIV
        MEKGS +M+L L   +L  A  QSA+NVRATY+LYNP  INW+YL ASVFCATWDA +PLEWRR YGWTAFCGPVGP GRDSCG CLRV NTETG  +IV
Subjt:  MEKGS-LMLLALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIV

Query:  RIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC
        RIVDQC+NGGLDLD  VF+++DTNGNG  RGHL V+Y+FVNC
Subjt:  RIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]8.5e-5673.24Show/hide
Query:  MEKGS-LMLLALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIV
        MEKGS LM+LAL   +L  A  QSA+NVRATY+LYNP  INW+YL ASVFCATWDA +P+EWRR YGWTAFCGPVGP G+ SCG CLRV NTETG  +IV
Subjt:  MEKGS-LMLLALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIV

Query:  RIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC
        RIVDQC+NGGLDLD  VF+++DTNGNG+ RGHLIV+Y+FVNC
Subjt:  RIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC

XP_038891021.1 pathogenesis-related protein PR-4-like [Benincasa hispida]2.6e-6581.12Show/hide
Query:  MEKGSL--MLLALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQI
        M++GSL  ++LALWASL+GG  GQSASNV ATYNLYNP +INWNYLTASV+CATWDA +PL WR HYGWTAFCGP GPTGRDSCG CLRV+NTETGD++ 
Subjt:  MEKGSL--MLLALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQI

Query:  VRIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC
        VRIVDQCSNGGLDLDYGVFQKLDTNGNG A GHL+VDY FVNC
Subjt:  VRIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LJA9 Barwin domain-containing protein4.1e-6478.47Show/hide
Query:  MEKGSLML---LALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQ
        M++GSL++   LALWASLLG   GQSASNV ATYN YNP +I WNY+TASVFC+TWDA +PL WR+HYGWTAFCGPVGP+GR+SCG CLRV+NTETGD++
Subjt:  MEKGSLML---LALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQ

Query:  IVRIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC
         VRIVDQCSNGGLDLD+GVFQKLDTNGNG ARGHLIVDY FVNC
Subjt:  IVRIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like1.2e-5573.24Show/hide
Query:  MEKGS-LMLLALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIV
        MEKGS +M+L L   +L  A  QSA+NVRATY+LYNP  INW+YL ASVFCATWDA +PLEWRR YGWTAFCGPVGP GRDSCG CLRV NTETG  +IV
Subjt:  MEKGS-LMLLALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIV

Query:  RIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC
        RIVDQC+NGGLDLD  VF+++DTNGNG  RGHL V+Y+FVNC
Subjt:  RIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC

A0A5A7VCZ9 Pathogenesis-related protein PR-4-like4.1e-6479.72Show/hide
Query:  MEKGSLML--LALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQI
        M++GSL++  LALWASLLG   GQSASNV ATYN YNP +I WNY+TASVFCATWDA +PL WR+HYGWTAFCGPVGPTGRDSCG CLRV+NTETGD++ 
Subjt:  MEKGSLML--LALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQI

Query:  VRIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC
        VRIVDQCSNGGLDLDY VF+KLD+NGNG ARGHLIVDY FVNC
Subjt:  VRIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like1.2e-5573.24Show/hide
Query:  MEKGS-LMLLALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIV
        MEKGS +M+L L   +L  A  QSA+NVRATY+LYNP  INW+YL ASVFCATWDA +PLEWRR YGWTAFCGPVGP GRDSCG CLRV NTETG  +IV
Subjt:  MEKGS-LMLLALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIV

Query:  RIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC
        RIVDQC+NGGLDLD  VF+++DTNGNG  RGHL V+Y+FVNC
Subjt:  RIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like4.1e-5673.24Show/hide
Query:  MEKGS-LMLLALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIV
        MEKGS LM+LAL   +L  A  QSA+NVRATY+LYNP  INW+YL ASVFCATWDA +P+EWRR YGWTAFCGPVGP G+ SCG CLRV NTETG  +IV
Subjt:  MEKGS-LMLLALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIV

Query:  RIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC
        RIVDQC+NGGLDLD  VF+++DTNGNG+ RGHLIV+Y+FVNC
Subjt:  RIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN18.9e-4867.23Show/hide
Query:  SASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIVRIVDQCSNGGLDLDYGVFQKLDT
        SA NVRATY++YNP ++ W+    S +C+TWDA +PL WR+ YGWTAFCGPVGP GRDSCG CLRV NT TG Q  VRIVDQCSNGGLDLD  VF+++DT
Subjt:  SASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIVRIVDQCSNGGLDLDYGVFQKLDT

Query:  NGNGIARGHLIVDYEFVNC
        +GNG  +GHLIV+Y+FV+C
Subjt:  NGNGIARGHLIVDYEFVNC

P09762 Wound-induced protein WIN22.6e-4766.94Show/hide
Query:  GQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIVRIVDQCSNGGLDLDYGVFQKL
        G SA NVRATY++YNP ++ W+    S +C+TWDA +P  WR  YGWTAFCGPVGP GRDSCG CLRV NT TG Q  VRIVDQCSNGGLDLD  VFQ++
Subjt:  GQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIVRIVDQCSNGGLDLDYGVFQKL

Query:  DTNGNGIARGHLIVDYEFVNC
        DT+G G  +GHLIV+Y+FVNC
Subjt:  DTNGNGIARGHLIVDYEFVNC

P29062 Pathogenesis-related protein PR-4A1.2e-4966.17Show/hide
Query:  LALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIVRIVDQCSNG
        L + + ++  A  QSA+NVR+TY+LYNP +INW+   AS FCATWDA +PL WR+ YGWTAFCGP GP G+DSCG CLRV NT TG Q  VRIVDQCSNG
Subjt:  LALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIVRIVDQCSNG

Query:  GLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC
        GLDLD  VF +LDTNG G  +GHL V+YEFVNC
Subjt:  GLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC

P29063 Pathogenesis-related protein PR-4B1.9e-5066.92Show/hide
Query:  LALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIVRIVDQCSNG
        L + + ++  A  QSA+NVR+TY+LYNP +INW+   AS FCATWDA +PL WR+ YGWTAFCGP GP G+DSCG CLRV NT TG Q  VRIVDQCSNG
Subjt:  LALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIVRIVDQCSNG

Query:  GLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC
        GLDLD  VF +LDTNG G  +GHLIV+YEFVNC
Subjt:  GLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC

P32045 Pathogenesis-related protein P26.6e-5165.03Show/hide
Query:  MEKGSLMLLALWA--SLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQI
        ME+ + + +A +    ++  A  QSA+NVRATY+LYNP +INW+  TASV+CATWDA +PLEWRR YGWTAFCGP GPTG+ SCG CLRV NT TG Q+ 
Subjt:  MEKGSLMLLALWA--SLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQI

Query:  VRIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC
        VRIVDQC NGGLDLD  VF +LDTNG G  RG+L V+YEFVNC
Subjt:  VRIVDQCSNGGLDLDYGVFQKLDTNGNGIARGHLIVDYEFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 43.8e-4662.31Show/hide
Query:  WASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIVRIVDQCSNGGLD
        W S   G  G+SASNVRATY+ YNPA  NW+    S +C+TWDA +P  WR  YGWTAFCGP GP G+ SCG CLRVKNT T     VRIVDQCSNGGLD
Subjt:  WASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIVRIVDQCSNGGLD

Query:  LDYGVFQKLDTNGNGIARGHLIVDYEFVNC
        LD  +F ++DT+G G  +GHLIVDY+FV+C
Subjt:  LDYGVFQKLDTNGNGIARGHLIVDYEFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGGAAGTTTGATGTTGTTGGCTTTGTGGGCGAGTCTGCTCGGCGGCGCCATCGGCCAAAGCGCCAGCAACGTGAGGGCGACGTATAATCTGTACAATCCTGC
AAGCATAAACTGGAATTATCTAACAGCCAGTGTGTTCTGTGCTACATGGGATGCTGGTGAGCCATTGGAGTGGCGCAGACACTATGGCTGGACTGCCTTCTGCGGCCCCG
TCGGCCCTACCGGCCGAGATTCGTGCGGCCACTGCCTTAGGGTGAAAAACACAGAGACAGGAGACCAACAAATAGTAAGAATTGTGGATCAATGCAGCAATGGAGGCCTA
GATTTGGACTATGGTGTGTTCCAAAAATTAGACACTAATGGAAATGGCATTGCTCGTGGTCATCTTATAGTCGATTACGAGTTTGTTAACTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAGGAAGTTTGATGTTGTTGGCTTTGTGGGCGAGTCTGCTCGGCGGCGCCATCGGCCAAAGCGCCAGCAACGTGAGGGCGACGTATAATCTGTACAATCCTGC
AAGCATAAACTGGAATTATCTAACAGCCAGTGTGTTCTGTGCTACATGGGATGCTGGTGAGCCATTGGAGTGGCGCAGACACTATGGCTGGACTGCCTTCTGCGGCCCCG
TCGGCCCTACCGGCCGAGATTCGTGCGGCCACTGCCTTAGGGTGAAAAACACAGAGACAGGAGACCAACAAATAGTAAGAATTGTGGATCAATGCAGCAATGGAGGCCTA
GATTTGGACTATGGTGTGTTCCAAAAATTAGACACTAATGGAAATGGCATTGCTCGTGGTCATCTTATAGTCGATTACGAGTTTGTTAACTGTTAA
Protein sequenceShow/hide protein sequence
MEKGSLMLLALWASLLGGAIGQSASNVRATYNLYNPASINWNYLTASVFCATWDAGEPLEWRRHYGWTAFCGPVGPTGRDSCGHCLRVKNTETGDQQIVRIVDQCSNGGL
DLDYGVFQKLDTNGNGIARGHLIVDYEFVNC