CuGenDBv2

Gene ID	Spg003515
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	J domain-containing protein
Genome location	scaffold4:44882471..44887394
RNA-Seq Expression	Spg003515
Synteny	Spg003515
Gene Ontology terms	GO:0009507 - chloroplast (cellular component) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001623 - DnaJ domain IPR036869 - Chaperone J-domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0047985.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]

8.4e-105

75.81

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Query:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL
        MEALCFST   + LPFRKTVGS N TSNFPS SK SILF SSS+SRF  ICRQRIEG+D PLS  MAAYRLLG+DPTCSESELKAAFRAK          
Subjt:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL

Query:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY
        VKQFHPDV RNGNDSDSMIRRVIQAYE L S       E+ CL+  E    + + V   +     KGCPYSCVDRAPHVFTFA STGTARATSQGH EDY
Subjt:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY

Query:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY
        Q+Q+A GQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRY+KPKREPK STERVDWY
Subjt:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY

KAG6586261.1 Chaperone protein dnaJ C76, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-101

74.73

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Query:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL
        MEAL  STSA +VLPFRKTVGS          SK SILFPSSS SRFATICRQRI+G+D PLS+AM AYRL GVDPTCSESELKAAFRAK          
Subjt:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL

Query:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY
        VKQFHPDV R+GN SDSMIRRVIQAYE L S       E+ CL+  E      + V   +     KGCPYSCVDRAPH FTFA STGTARATSQGHGEDY
Subjt:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY

Query:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY
        QVQIA GQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPK STERVDWY
Subjt:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY

KGN60912.1 hypothetical protein Csa_023479 [Cucumis sativus]

2.7e-103

75.09

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Query:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL
        MEALCFST   +VLPFRKTVGS N TSNFPS SK SILFPSSS+SRF  ICRQR EG+D  LS  MAAYRLLG+DPTCSESELKAAFRAK          
Subjt:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL

Query:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY
        VKQFHPDV RNGNDSDSMIRRVIQAYE L S       E+ CL+  E    + + V   +     KGCPYSCVDRAPHVFTFA STGTARA SQGH EDY
Subjt:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY

Query:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY
        Q+Q+A GQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRY+KPKREPK STE+VDWY
Subjt:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY

XP_022150755.1 pentatricopeptide repeat-containing protein At3g05340 [Momordica charantia]

7.1e-104

74.19

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Query:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSS--SRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLC
        M ALCF  S  ++LPFRKTVGSPN +SNFPS SKPSILFPSSSS  SRFATICRQR EG+DAPLS+A+AAYR+LGVDPTCS+SELKAAFRAK        
Subjt:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSS--SRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLC

Query:  RLVKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGE
          VKQFHPDV  NGN SDSMIRRVIQAYE L S       E+ CL+  E    + + V   +     KGCPYSCVD APHVFTFA STGTARATSQGHGE
Subjt:  RLVKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGE

Query:  DYQVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY
        DYQV IA GQCPRSCIHYVTPLQRIILEELLDSAL+VPYDNS EADLLYSLIVKSKFENNRY+KPK+EPKAST +VDWY
Subjt:  DYQVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY

XP_023537184.1 uncharacterized protein LOC111798340 [Cucurbita pepo subsp. pepo]

1.5e-101

74.73

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Query:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL
        MEAL  STSA +VLPFRKTVGS          SK SILFPSSS SRFATICRQRI+G+D PLS+AM AYRL GVDPTCSESELKAAFRAK          
Subjt:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL

Query:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY
        VKQFHPDV R+GN SDSMIRRVIQAYE L S       E+ CL+  E      + V   +     +GCPYSCVDRAPHVFTFA STGTARATSQGHGEDY
Subjt:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY

Query:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY
        QVQIA GQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPK STERVDWY
Subjt:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJM6 J domain-containing protein

1.3e-103

75.09

Show/hide

Query:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL
        MEALCFST   +VLPFRKTVGS N TSNFPS SK SILFPSSS+SRF  ICRQR EG+D  LS  MAAYRLLG+DPTCSESELKAAFRAK          
Subjt:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL

Query:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY
        VKQFHPDV RNGNDSDSMIRRVIQAYE L S       E+ CL+  E    + + V   +     KGCPYSCVDRAPHVFTFA STGTARA SQGH EDY
Subjt:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY

Query:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY
        Q+Q+A GQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRY+KPKREPK STE+VDWY
Subjt:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY

A0A5A7U2T5 Pentatricopeptide repeat-containing protein

4.1e-105

75.81

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Query:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL
        MEALCFST   + LPFRKTVGS N TSNFPS SK SILF SSS+SRF  ICRQRIEG+D PLS  MAAYRLLG+DPTCSESELKAAFRAK          
Subjt:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL

Query:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY
        VKQFHPDV RNGNDSDSMIRRVIQAYE L S       E+ CL+  E    + + V   +     KGCPYSCVDRAPHVFTFA STGTARATSQGH EDY
Subjt:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY

Query:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY
        Q+Q+A GQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRY+KPKREPK STERVDWY
Subjt:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY

A0A6J1D9D8 pentatricopeptide repeat-containing protein At3g05340

3.4e-104

74.19

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Query:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSS--SRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLC
        M ALCF  S  ++LPFRKTVGSPN +SNFPS SKPSILFPSSSS  SRFATICRQR EG+DAPLS+A+AAYR+LGVDPTCS+SELKAAFRAK        
Subjt:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSS--SRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLC

Query:  RLVKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGE
          VKQFHPDV  NGN SDSMIRRVIQAYE L S       E+ CL+  E    + + V   +     KGCPYSCVD APHVFTFA STGTARATSQGHGE
Subjt:  RLVKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGE

Query:  DYQVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY
        DYQV IA GQCPRSCIHYVTPLQRIILEELLDSAL+VPYDNS EADLLYSLIVKSKFENNRY+KPK+EPKAST +VDWY
Subjt:  DYQVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY

A0A6J1FBN2 uncharacterized protein LOC111443953

6.1e-101

74.37

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Query:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL
        MEAL  STSA +VLPFRKTVGS          SK SI FPSSS SRFATICRQRI+G+D PLS+AM AYRL GVDPTCSESELKAAFRAK          
Subjt:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL

Query:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY
        VKQFHPDV R+GN SDSMIRRVIQAYE L S       E+ CL+  E      + V   +     KGCPYSCVDRAPH FTFA STGTARATSQGHGEDY
Subjt:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY

Query:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY
        QVQIA GQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPK STERVDWY
Subjt:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY

A0A6J1HMW8 uncharacterized protein LOC111465640

1.8e-100

73.65

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Query:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL
        MEAL FSTSA  VLPFRKTVGS          SK SILFPSSS SRFATICRQRI+G+D PLS+AM AY+L GVDPTCSESELKAAFRAK          
Subjt:  MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRL

Query:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY
        VK+FHPDV R+GN SDSMIRRVIQAYE L S       E+ CL+  E      + V   +     KGCPYSCV RAPHVFTFA STGTARATSQGHGEDY
Subjt:  VKQFHPDVYRNGNDSDSMIRRVIQAYESLIS-------EKMCLEGIER---KCYPVTAEQSSL--KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDY

Query:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY
        QVQIA GQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAE+DLLYSLIVKS+FENNRYRKPKREPK STERVDWY
Subjt:  QVQIAFGQCPRSCIHYVTPLQRIILEELLDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G05345.1 Chaperone DnaJ-domain superfamily protein

5.1e-60

53.6

Show/hide

Query:  SKPSILFPS----SSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRLVKQFHPDVYRNGNDSDSMIRRVIQAYES
        S P I F S    S+S RF   CR +   D  PLSS+ + Y +LGV+P+CS SELKAAFRAK          VKQ+HPDV ++G++SD MIRR+IQAYE 
Subjt:  SKPSILFPS----SSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRLVKQFHPDVYRNGNDSDSMIRRVIQAYES

Query:  L-------ISEKMCLEGIER-KCYPVTAEQSSL----KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDYQVQIAFGQCPRSCIHYVTPLQRIILEEL
        L       I E  CL+  +  +C  +    + +    K C Y C + A HVF+   S+GTARA SQGHGEDY+VQ A  QCPR+CIHYVTP QRIILEEL
Subjt:  L-------ISEKMCLEGIER-KCYPVTAEQSSL----KGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDYQVQIAFGQCPRSCIHYVTPLQRIILEEL

Query:  LDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKP-KREPKASTERVDWY
        LDS +D PYD SAEA+ LY+LIVK+KFENNRY+KP K++P++S + VDW+
Subjt:  LDSALDVPYDNSAEADLLYSLIVKSKFENNRYRKP-KREPKASTERVDWY

Sequences

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CDS sequence

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ATGGAGGCACTGTGTTTCTCCACTTCAGCCTCTTCCGTTCTTCCATTTCGAAAAACCGTTGGCTCTCCCAATTACACTTCCAATTTTCCCTCCAATTCAAAACCCTCGAT
TCTCTTCCCTTCCTCATCAAGCTCTCGATTCGCAACGATTTGCAGGCAAAGGATTGAAGGAGATGACGCGCCTCTCTCCAGTGCTATGGCTGCTTACAGATTGCTCGGCG
TCGACCCGACCTGCTCCGAATCCGAGCTCAAAGCCGCTTTTCGAGCCAAAGTACTGTTTCTCTCTTCCCTTTGCCGCTTGGTGAAGCAATTTCATCCGGACGTGTACAGA
AATGGGAATGATTCGGATTCTATGATTCGTCGTGTAATTCAGGCGTACGAGTCACTAATTAGTGAGAAAATGTGTTTAGAAGGTATTGAAAGAAAATGTTATCCAGTTAC
AGCCGAACAGAGTTCATTGAAAGGCTGCCCATATTCTTGTGTGGATAGAGCTCCTCATGTCTTCACTTTTGCTCCTTCCACCGGGACAGCCCGGGCCACTTCTCAAGGAC
ATGGTGAAGATTATCAGGTTCAGATTGCATTTGGCCAATGCCCCAGAAGCTGTATACATTATGTAACACCTTTGCAAAGAATCATTCTAGAAGAGCTACTTGACAGTGCC
TTGGATGTGCCTTATGATAATTCCGCAGAGGCAGATTTACTATATTCTCTTATAGTGAAATCAAAATTCGAGAATAATCGATACAGAAAGCCAAAGAGGGAGCCAAAGGC
TTCAACAGAACGAGTGGATTGGTATTGA

mRNA sequence

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Protein sequence

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MEALCFSTSASSVLPFRKTVGSPNYTSNFPSNSKPSILFPSSSSSRFATICRQRIEGDDAPLSSAMAAYRLLGVDPTCSESELKAAFRAKVLFLSSLCRLVKQFHPDVYR
NGNDSDSMIRRVIQAYESLISEKMCLEGIERKCYPVTAEQSSLKGCPYSCVDRAPHVFTFAPSTGTARATSQGHGEDYQVQIAFGQCPRSCIHYVTPLQRIILEELLDSA
LDVPYDNSAEADLLYSLIVKSKFENNRYRKPKREPKASTERVDWY

Spg003515 (gene) of Sponge gourd (cylindrica) v1 genome