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Spg003518 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003518
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold4:47628690..47629751
RNA-Seq ExpressionSpg003518
SyntenySpg003518
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN60682.1 hypothetical protein Csa_019276 [Cucumis sativus]5.7e-3271.65Show/hide
Query:  MSSSILSSQVMAMAFAALSGTVI-FLSFCLHKSHPSISSVGKK--KEMKKKIRKRVHFAEDLAI--SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGG
        MSSSILSSQ MAMAFA   GTVI  LSF LHKSHPSISSV KK  KE KKK RK+VHF++DLAI  S ++L+RKK ++LGSS P+GRAP   LT+ GGGG
Subjt:  MSSSILSSQVMAMAFAALSGTVI-FLSFCLHKSHPSISSVGKK--KEMKKKIRKRVHFAEDLAI--SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGG

Query:  GGMPANRVALYNGILRDRLVQRMAYSL
        GG+PANR ALYNGILR+RLV R+AYSL
Subjt:  GGMPANRVALYNGILRDRLVQRMAYSL

XP_008457539.1 PREDICTED: uncharacterized protein LOC103497202 [Cucumis melo]8.8e-3375.59Show/hide
Query:  SSSILSSQVMAMAFAALS-GTVI-FLSFCLHKSHPSISSVGKKKEM--KKKIRKRVHFAEDLAI--SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGG
        SSSILSSQ MAMAFAALS GTVI  LS  LHKSHPSISSV +KKEM  KKK RKRVHF++DLAI  S EEL+RKK +ILGSS   GRA    LT +GGGG
Subjt:  SSSILSSQVMAMAFAALS-GTVI-FLSFCLHKSHPSISSVGKKKEM--KKKIRKRVHFAEDLAI--SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGG

Query:  GGMPANRVALYNGILRDRLVQRMAYSL
        GGMPANR ALYNGILRDRLV R+AYSL
Subjt:  GGMPANRVALYNGILRDRLVQRMAYSL

XP_022946910.1 uncharacterized protein LOC111450851 isoform X1 [Cucurbita moschata]1.0e-2870.83Show/hide
Query:  MAMAFAALSGTV-IFLSFCLHKSHPSISSVGKKK------EMKKKIRKRVHFAEDLAI-SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGGGGMPANR
        MAMA AALSG V + LSF   KS  S+SS GK+K      + KKK RKRVHFA+D A+ S EELQRK GLILG S P GRAPP  LTSHGGGG GMPANR
Subjt:  MAMAFAALSGTV-IFLSFCLHKSHPSISSVGKKK------EMKKKIRKRVHFAEDLAI-SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGGGGMPANR

Query:  VALYNGILRDRLVQRMAYSL
        VALYNGILRDRLV RMAYSL
Subjt:  VALYNGILRDRLVQRMAYSL

XP_022946911.1 uncharacterized protein LOC111450851 isoform X2 [Cucurbita moschata]9.1e-3074.56Show/hide
Query:  MAMAFAALSGTV-IFLSFCLHKSHPSISSVGKKKEMKKKIRKRVHFAEDLAI-SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGGGGMPANRVALYNG
        MAMA AALSG V + LSF   KS  S+SSV KK   KKK RKRVHFA+D A+ S EELQRK GLILG S P GRAPP  LTSHGGGG GMPANRVALYNG
Subjt:  MAMAFAALSGTV-IFLSFCLHKSHPSISSVGKKKEMKKKIRKRVHFAEDLAI-SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGGGGMPANRVALYNG

Query:  ILRDRLVQRMAYSL
        ILRDRLV RMAYSL
Subjt:  ILRDRLVQRMAYSL

XP_038890799.1 uncharacterized protein LOC120080255 [Benincasa hispida]8.2e-3982.54Show/hide
Query:  MSSSILSSQVMAMAFAALSGTVI-FLSFCLHKSHPSISSVGKKKEM--KKKIRKRVHFAEDLAI-SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGGG
        MSSSILSSQ MAMAFAALSGTVI  LSFCLHKS PSISSV KKKEM  KKK RKRVHFA+DLAI   EELQ KKGLILGSS P GR P   LTS GGGGG
Subjt:  MSSSILSSQVMAMAFAALSGTVI-FLSFCLHKSHPSISSVGKKKEM--KKKIRKRVHFAEDLAI-SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGGG

Query:  GMPANRVALYNGILRDRLVQRMAYSL
        GMPANRVALYNGILRDRLV R+AYSL
Subjt:  GMPANRVALYNGILRDRLVQRMAYSL

TrEMBL top hitse value%identityAlignment
A0A0A0LIY8 Uncharacterized protein2.8e-3271.65Show/hide
Query:  MSSSILSSQVMAMAFAALSGTVI-FLSFCLHKSHPSISSVGKK--KEMKKKIRKRVHFAEDLAI--SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGG
        MSSSILSSQ MAMAFA   GTVI  LSF LHKSHPSISSV KK  KE KKK RK+VHF++DLAI  S ++L+RKK ++LGSS P+GRAP   LT+ GGGG
Subjt:  MSSSILSSQVMAMAFAALSGTVI-FLSFCLHKSHPSISSVGKK--KEMKKKIRKRVHFAEDLAI--SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGG

Query:  GGMPANRVALYNGILRDRLVQRMAYSL
        GG+PANR ALYNGILR+RLV R+AYSL
Subjt:  GGMPANRVALYNGILRDRLVQRMAYSL

A0A1S3C5Q6 uncharacterized protein LOC1034972024.2e-3375.59Show/hide
Query:  SSSILSSQVMAMAFAALS-GTVI-FLSFCLHKSHPSISSVGKKKEM--KKKIRKRVHFAEDLAI--SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGG
        SSSILSSQ MAMAFAALS GTVI  LS  LHKSHPSISSV +KKEM  KKK RKRVHF++DLAI  S EEL+RKK +ILGSS   GRA    LT +GGGG
Subjt:  SSSILSSQVMAMAFAALS-GTVI-FLSFCLHKSHPSISSVGKKKEM--KKKIRKRVHFAEDLAI--SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGG

Query:  GGMPANRVALYNGILRDRLVQRMAYSL
        GGMPANR ALYNGILRDRLV R+AYSL
Subjt:  GGMPANRVALYNGILRDRLVQRMAYSL

A0A5A7V7G5 Uncharacterized protein5.2e-2363.41Show/hide
Query:  SSSILSSQVMAMAFAALS-GTVI-FLSFCLHKSHPSISSVGKKKEMKKKIRKRVHFAEDLAISNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGGGGMP
        SSSILSSQ MAMAFAALS GTVI  LS  LHKSHPSISS                    +  S EEL+RKK +ILGSS   GRA    LT +GGGGGGMP
Subjt:  SSSILSSQVMAMAFAALS-GTVI-FLSFCLHKSHPSISSVGKKKEMKKKIRKRVHFAEDLAISNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGGGGMP

Query:  ANRVALYNGILRDRLVQRMAYSL
        ANR ALYNGILRDRLV R+AYSL
Subjt:  ANRVALYNGILRDRLVQRMAYSL

A0A6J1G4X1 uncharacterized protein LOC111450851 isoform X24.4e-3074.56Show/hide
Query:  MAMAFAALSGTV-IFLSFCLHKSHPSISSVGKKKEMKKKIRKRVHFAEDLAI-SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGGGGMPANRVALYNG
        MAMA AALSG V + LSF   KS  S+SSV KK   KKK RKRVHFA+D A+ S EELQRK GLILG S P GRAPP  LTSHGGGG GMPANRVALYNG
Subjt:  MAMAFAALSGTV-IFLSFCLHKSHPSISSVGKKKEMKKKIRKRVHFAEDLAI-SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGGGGMPANRVALYNG

Query:  ILRDRLVQRMAYSL
        ILRDRLV RMAYSL
Subjt:  ILRDRLVQRMAYSL

A0A6J1G5C3 uncharacterized protein LOC111450851 isoform X14.9e-2970.83Show/hide
Query:  MAMAFAALSGTV-IFLSFCLHKSHPSISSVGKKK------EMKKKIRKRVHFAEDLAI-SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGGGGMPANR
        MAMA AALSG V + LSF   KS  S+SS GK+K      + KKK RKRVHFA+D A+ S EELQRK GLILG S P GRAPP  LTSHGGGG GMPANR
Subjt:  MAMAFAALSGTV-IFLSFCLHKSHPSISSVGKKK------EMKKKIRKRVHFAEDLAI-SNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGGGGMPANR

Query:  VALYNGILRDRLVQRMAYSL
        VALYNGILRDRLV RMAYSL
Subjt:  VALYNGILRDRLVQRMAYSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52565.1 unknown protein9.1e-0442.17Show/hide
Query:  ISSVGKKKEMKKKIRKRVHFAEDL--AISNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGG---GGMPANRVALYNGILRDR
        +SS  KKK+ K K +K+V FAE++     N E  RKK L           P   +     G      MPANR+ALYNGILRDR
Subjt:  ISSVGKKKEMKKKIRKRVHFAEDL--AISNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGG---GGMPANRVALYNGILRDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTTCCATTTTGAGCTCCCAAGTAATGGCTATGGCTTTTGCAGCTCTCTCAGGCACTGTCATCTTCCTCTCCTTTTGCCTCCATAAATCCCACCCCTCAATTTC
TTCTGTGGGGAAGAAGAAAGAGATGAAGAAGAAGATAAGAAAAAGAGTTCACTTTGCAGAGGATTTGGCCATAAGTAATGAAGAGTTGCAGAGGAAAAAAGGCTTAATTT
TGGGTTCATCGTCGCCGGCGGGAAGAGCTCCGCCGTCGTGTTTGACGAGCCACGGCGGAGGAGGCGGCGGAATGCCGGCCAATAGGGTGGCGCTGTACAATGGAATCTTA
AGGGATCGTTTGGTTCAAAGGATGGCATATTCTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTTCCATTTTGAGCTCCCAAGTAATGGCTATGGCTTTTGCAGCTCTCTCAGGCACTGTCATCTTCCTCTCCTTTTGCCTCCATAAATCCCACCCCTCAATTTC
TTCTGTGGGGAAGAAGAAAGAGATGAAGAAGAAGATAAGAAAAAGAGTTCACTTTGCAGAGGATTTGGCCATAAGTAATGAAGAGTTGCAGAGGAAAAAAGGCTTAATTT
TGGGTTCATCGTCGCCGGCGGGAAGAGCTCCGCCGTCGTGTTTGACGAGCCACGGCGGAGGAGGCGGCGGAATGCCGGCCAATAGGGTGGCGCTGTACAATGGAATCTTA
AGGGATCGTTTGGTTCAAAGGATGGCATATTCTCTTTAA
Protein sequenceShow/hide protein sequence
MSSSILSSQVMAMAFAALSGTVIFLSFCLHKSHPSISSVGKKKEMKKKIRKRVHFAEDLAISNEELQRKKGLILGSSSPAGRAPPSCLTSHGGGGGGMPANRVALYNGIL
RDRLVQRMAYSL