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Spg003549 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003549
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold4:45750289..45750765
RNA-Seq ExpressionSpg003549
SyntenySpg003549
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR013865 - Protein FAM32A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584439.1 Basic transcription factor 3, partial [Cucurbita argyrosperma subsp. sororia]2.0e-1386.96Show/hide
Query:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
        +G VYTIDAAK MKYEELFPVET+KFGYDPNN +TKFKSVEEALDD
Subjt:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
XP_004137395.2 uncharacterized protein LOC101213981 [Cucumis sativus]6.9e-1486.96Show/hide
Query:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
        DG +YTIDAAK MKYEELFPVET+KFGYDPNN NTKFKSVE+ALDD
Subjt:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
XP_022137706.1 uncharacterized protein LOC111009076 [Momordica charantia]2.1e-1593.48Show/hide
Query:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
        DG+VYTIDAAK MKYEELFPVETKKFGYDPNN NTKFKSVEEALDD
Subjt:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
XP_023524446.1 uncharacterized protein LOC111788363 [Cucurbita pepo subsp. pepo]1.2e-1388.89Show/hide
Query:  GDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
        G+VYTIDAAK MKYEELFPVETKKFGYDPNN NTK KSVEE+LDD
Subjt:  GDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
XP_038893643.1 uncharacterized protein LOC120082512 [Benincasa hispida]3.1e-1489.13Show/hide
Query:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
        DG +YTIDAAK MKYEELFPVET+KFGYDPNN NTKFKSVEEALDD
Subjt:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
TrEMBL top hitse value%identityAlignment
A0A0A0LVD6 Uncharacterized protein3.3e-1486.96Show/hide
Query:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
        DG +YTIDAAK MKYEELFPVET+KFGYDPNN NTKFKSVE+ALDD
Subjt:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
A0A5A7SXI8 Uncharacterized protein2.8e-1384.78Show/hide
Query:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
        DG +YTIDAAK MKYEELFPVET+KFGYDPNN NTK KSVE+ALDD
Subjt:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
A0A6J1C7F9 uncharacterized protein LOC1110090761.0e-1593.48Show/hide
Query:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
        DG+VYTIDAAK MKYEELFPVETKKFGYDPNN NTKFKSVEEALDD
Subjt:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
A0A6J1EB87 uncharacterized protein LOC1114315902.2e-1384.78Show/hide
Query:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
        +G VYTIDAAK MKYEELFPVET++FGYDPNN +TKFKSVEEALDD
Subjt:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
A0A6J1KIE4 uncharacterized protein LOC1114955209.7e-1486.96Show/hide
Query:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
        +G VYTIDAAK MKYEELFPVET+KFGYDPNN +TKFKSVEEALDD
Subjt:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25720.1 unknown protein4.2e-0960.87Show/hide
Query:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD
        D D+Y+IDAAK  KY++LFPVE KKFGY P      F+S E+ALDD
Subjt:  DGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATGGAGATGTGTATACTATTGATGCAGCCAAGCATATGAAGTATGAGGAGCTCTTCCCGGTGGAGACCAAGAAGTTTGGTTACGACCCCAACAACTTCAACAC
CAAGTTCAAGTCTGTGGAAGAAGCGCTAGATGATCCCCATTGTGCTGAAGCACCAGTTCAACCTTCAGCTTTCTTACAAATTGAATCTCAAACAGCATTAATCCTTCACG
AGAGTATCTTGTTGGAAAGCAAGAAATTTCTGGCACATAGTAATCCGAGAGTTGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATGGAGATGTGTATACTATTGATGCAGCCAAGCATATGAAGTATGAGGAGCTCTTCCCGGTGGAGACCAAGAAGTTTGGTTACGACCCCAACAACTTCAACAC
CAAGTTCAAGTCTGTGGAAGAAGCGCTAGATGATCCCCATTGTGCTGAAGCACCAGTTCAACCTTCAGCTTTCTTACAAATTGAATCTCAAACAGCATTAATCCTTCACG
AGAGTATCTTGTTGGAAAGCAAGAAATTTCTGGCACATAGTAATCCGAGAGTTGAATGA
Protein sequenceShow/hide protein sequence
MADGDVYTIDAAKHMKYEELFPVETKKFGYDPNNFNTKFKSVEEALDDPHCAEAPVQPSAFLQIESQTALILHESILLESKKFLAHSNPRVE