; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003553 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003553
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like
Genome locationscaffold4:46686369..46686722
RNA-Seq ExpressionSpg003553
SyntenySpg003553
Gene Ontology termsGO:0009299 - mRNA transcription (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR006936 - ALOG domain
IPR040222 - ALOG family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586335.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1, partial [Cucurbita argyrosperma subsp. sororia]3.6e-6096.58Show/hide
Query:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK
        MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPE+NPFGARAVRLYLREVRDFQAKARGVSYEKK
Subjt:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK

Query:  RKRPKQKLTNSTQDGAT
        RKRPKQK+ NS QDGAT
Subjt:  RKRPKQKLTNSTQDGAT

XP_022143023.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like [Momordica charantia]1.7e-5794.02Show/hide
Query:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK
        MCSGAHVLEFLRYLDQFGKTKVHNQ CPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAY ENG RPE+NPFGARAVRLYLREVRDFQAKARGVSYEKK
Subjt:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK

Query:  RKRPKQKLTNSTQDGAT
        RKRPKQK+TNSTQD  T
Subjt:  RKRPKQKLTNSTQDGAT

XP_022938293.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like [Cucurbita moschata]3.6e-6096.58Show/hide
Query:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK
        MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPE+NPFGARAVRLYLREVRDFQAKARGVSYEKK
Subjt:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK

Query:  RKRPKQKLTNSTQDGAT
        RKRPKQK+ NS QDGAT
Subjt:  RKRPKQKLTNSTQDGAT

XP_022965962.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like [Cucurbita maxima]3.6e-6096.58Show/hide
Query:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK
        MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPE+NPFGARAVRLYLREVRDFQAKARGVSYEKK
Subjt:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK

Query:  RKRPKQKLTNSTQDGAT
        RKRPKQK+ NS QDGAT
Subjt:  RKRPKQKLTNSTQDGAT

XP_023538298.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like [Cucurbita pepo subsp. pepo]3.6e-6096.58Show/hide
Query:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK
        MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPE+NPFGARAVRLYLREVRDFQAKARGVSYEKK
Subjt:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK

Query:  RKRPKQKLTNSTQDGAT
        RKRPKQK+ NS QDGAT
Subjt:  RKRPKQKLTNSTQDGAT

TrEMBL top hitse value%identityAlignment
A0A2P5C392 ALOG domain containing protein5.3e-5792.31Show/hide
Query:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK
        MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEE+GGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK
Subjt:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK

Query:  RKRPKQKLTNSTQDGAT
        RKRPK K+T +T    T
Subjt:  RKRPKQKLTNSTQDGAT

A0A5C7IBB9 ALOG domain-containing protein5.3e-5795.54Show/hide
Query:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK
        +CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEE+GGRPEANPFGARAVR+YLREVRDFQAKARGVSYEKK
Subjt:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK

Query:  RKRPKQKLTNST
        RKRPKQK+T ST
Subjt:  RKRPKQKLTNST

A0A6J1CPQ1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like8.2e-5894.02Show/hide
Query:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK
        MCSGAHVLEFLRYLDQFGKTKVHNQ CPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAY ENG RPE+NPFGARAVRLYLREVRDFQAKARGVSYEKK
Subjt:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK

Query:  RKRPKQKLTNSTQDGAT
        RKRPKQK+TNSTQD  T
Subjt:  RKRPKQKLTNSTQDGAT

A0A6J1FIH1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like1.8e-6096.58Show/hide
Query:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK
        MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPE+NPFGARAVRLYLREVRDFQAKARGVSYEKK
Subjt:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK

Query:  RKRPKQKLTNSTQDGAT
        RKRPKQK+ NS QDGAT
Subjt:  RKRPKQKLTNSTQDGAT

A0A6J1HLQ5 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like1.8e-6096.58Show/hide
Query:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK
        MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPE+NPFGARAVRLYLREVRDFQAKARGVSYEKK
Subjt:  MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKK

Query:  RKRPKQKLTNSTQDGAT
        RKRPKQK+ NS QDGAT
Subjt:  RKRPKQKLTNSTQDGAT

SwissProt top hitse value%identityAlignment
A2XVI8 Protein G1-like43.0e-4985.05Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYE-KK
        CSGAHVLEFLRYLDQFGKTKVH   CPFFG P+PPAPCPCPLRQAWGSLDAL+GRLRAA+EENGGRPE+NPF ARAVRLYLREVR+ QA+ARGVSYE KK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYE-KK

Query:  RKRPKQK
        RK+P+Q+
Subjt:  RKRPKQK

A2YG32 Protein G1-like21.3e-4980Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKKR
        CSGAHVLEFLRYLDQFGKTKVH   CPFFG P+PPAPCPCPLRQAWGSLDAL+GRLRAA+EE+GGRPEANPFGARAVRLYLREVRD QAKARG++YEKKR
Subjt:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKKR

Query:  KRPKQKLTNSTQDGA
        ++     ++S+Q  A
Subjt:  KRPKQKLTNSTQDGA

Q652I1 Protein G1-like21.3e-4980Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKKR
        CSGAHVLEFLRYLDQFGKTKVH   CPFFG P+PPAPCPCPLRQAWGSLDAL+GRLRAA+EE+GGRPEANPFGARAVRLYLREVRD QAKARG++YEKKR
Subjt:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKKR

Query:  KRPKQKLTNSTQDGA
        ++     ++S+Q  A
Subjt:  KRPKQKLTNSTQDGA

Q6NNI3 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 11.7e-5294.12Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKKR
        CSGAHVLEFLRYLDQFGKTKVH+Q C FFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGG PEANPFG+RAVRL+LREVRDFQAKARGVSYEKKR
Subjt:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKKR

Query:  KR
        KR
Subjt:  KR

Q9M836 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 21.2e-5082.14Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKKR
        CSGAHVL+FLRYLDQFGKTKVH+Q C FFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGG PE +PFG+R+VR++LREVRDFQAK+RGVSYEKKR
Subjt:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKKR

Query:  KRPKQKLTNSTQ
        KR   K    +Q
Subjt:  KRPKQKLTNSTQ

Arabidopsis top hitse value%identityAlignment
AT1G07090.1 Protein of unknown function (DUF640)9.2e-4679.81Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYE-KK
        CSGAHV+EFL+YLDQFGKTKVH   CP+FG   PP+PC CPL+QAWGSLDALIGRLRAAYEENGGRP++NPF ARAVR+YLREVR+ QAKARG+ YE KK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYE-KK

Query:  RKRP
        RKRP
Subjt:  RKRP

AT2G31160.1 Protein of unknown function (DUF640)4.7e-5083.04Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYE-KK
        CSGAHVLEFLRYLDQFGKTKVH   C F+G PNPPAPCPCPLRQAWGSLDALIGRLRAA+EENGG+PE NPFGARAVRLYLREVRD Q+KARGVSYE KK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYE-KK

Query:  RKRPKQKLTNST
        RKRP    + S+
Subjt:  RKRPKQKLTNST

AT3G04510.1 Protein of unknown function (DUF640)8.6e-5282.14Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKKR
        CSGAHVL+FLRYLDQFGKTKVH+Q C FFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGG PE +PFG+R+VR++LREVRDFQAK+RGVSYEKKR
Subjt:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKKR

Query:  KRPKQKLTNSTQ
        KR   K    +Q
Subjt:  KRPKQKLTNSTQ

AT3G23290.2 Protein of unknown function (DUF640)2.8e-5087.04Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYE-KK
        CSGAHVLEFLRYLDQFGKTKVH   CPFFG PNPPAPC CPLRQAWGSLDALIGRLRAA+EENGG PE NPFGARAVRLYLREVRD QAKARG+SYE KK
Subjt:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYE-KK

Query:  RKRPKQKL
        RKRP   L
Subjt:  RKRPKQKL

AT5G28490.1 Protein of unknown function (DUF640)1.2e-5394.12Show/hide
Query:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKKR
        CSGAHVLEFLRYLDQFGKTKVH+Q C FFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGG PEANPFG+RAVRL+LREVRDFQAKARGVSYEKKR
Subjt:  CSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKKR

Query:  KR
        KR
Subjt:  KR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAGCGGCGCTCACGTGCTGGAATTTCTCCGGTACTTGGACCAGTTCGGGAAGACCAAAGTCCACAACCAGACCTGCCCGTTTTTCGGCCTGCCCAACCCTCCTGC
CCCCTGCCCCTGCCCGCTCCGGCAGGCCTGGGGCAGTCTCGACGCCCTCATCGGCCGCCTCCGGGCAGCCTACGAAGAGAACGGCGGCCGGCCGGAGGCCAACCCATTTG
GAGCTAGAGCCGTTCGACTCTATTTAAGGGAAGTTCGTGATTTTCAGGCGAAAGCAAGAGGCGTTAGCTATGAGAAGAAGAGGAAAAGGCCAAAGCAAAAGCTTACTAAT
TCAACTCAAGATGGTGCAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAGCGGCGCTCACGTGCTGGAATTTCTCCGGTACTTGGACCAGTTCGGGAAGACCAAAGTCCACAACCAGACCTGCCCGTTTTTCGGCCTGCCCAACCCTCCTGC
CCCCTGCCCCTGCCCGCTCCGGCAGGCCTGGGGCAGTCTCGACGCCCTCATCGGCCGCCTCCGGGCAGCCTACGAAGAGAACGGCGGCCGGCCGGAGGCCAACCCATTTG
GAGCTAGAGCCGTTCGACTCTATTTAAGGGAAGTTCGTGATTTTCAGGCGAAAGCAAGAGGCGTTAGCTATGAGAAGAAGAGGAAAAGGCCAAAGCAAAAGCTTACTAAT
TCAACTCAAGATGGTGCAACTTGA
Protein sequenceShow/hide protein sequence
MCSGAHVLEFLRYLDQFGKTKVHNQTCPFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGRPEANPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKQKLTN
STQDGAT