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Spg003578 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003578
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGuanine nucleotide-binding protein subunit gamma 3-like
Genome locationscaffold4:49162904..49166540
RNA-Seq ExpressionSpg003578
SyntenySpg003578
Gene Ontology termsGO:0007186 - G protein-coupled receptor signaling pathway (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061462.1 guanine nucleotide-binding protein subunit gamma 3-like [Cucumis melo var. makuwa]7.6e-4454.47Show/hide
Query:  ATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLEIPIDIR----------SIAADVNFGNG-----------------------
        ATPTRP SSSS  S+PPPYPKSPP+YPDLYGKRRQ AKLQML+REIGFLE  +                AD    N                        
Subjt:  ATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLEIPIDIR----------SIAADVNFGNG-----------------------

Query:  ---------------SVDSPVVSYRGFAVAVILDVRYISKSHPAATVTIHVNVYLAAAVNYRSGSVSGSVVGSVGSVVGSVDRVAGSVAVVQRYPDAHAL
                        VDSPVVSY GFAVAV+LD R ISKS PAATV   VN Y  AAVNYRSG V GSVVGSV           G VA+VQ YP+AHAL
Subjt:  ---------------SVDSPVVSYRGFAVAVILDVRYISKSHPAATVTIHVNVYLAAAVNYRSGSVSGSVVGSVGSVVGSVDRVAGSVAVVQRYPDAHAL

Query:  AQPSHAAHVVAIFHYL--HALNAHAVNANANANAR
         QPSHAA+VVAIFHYL   A + HAVNANANANA+
Subjt:  AQPSHAAHVVAIFHYL--HALNAHAVNANANANAR

KAF3439696.1 hypothetical protein FNV43_RR17974 [Rhamnella rubrinervis]8.4e-1939.71Show/hide
Query:  SSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLEIPID--------------------------IRSIAADVNFGNGSVDSPVVSYRGFAVA
        SSS+PSLPPP PKSPPEYPDLYGKRR+ AK+QMLEREIGFLE  +                           I +IA  V  GNGSV+SP ++  GFAVA
Subjt:  SSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLEIPID--------------------------IRSIAADVNFGNGSVDSPVVSYRGFAVA

Query:  VILDVRYISKSHPAATVTIHVNVYLAAAVNYRSGSVSGSVVGSVGSVVGSVDRVAGSVAVVQRYPDAHALAQPSHAAHVVA--IFHYLHALNAHAVNANA
        V+L   +      AA + +HV  +L + V ++SG  +                    +  V+R+          HAA +VA  +FH L AL A +  ANA
Subjt:  VILDVRYISKSHPAATVTIHVNVYLAAAVNYRSGSVSGSVVGSVGSVVGSVDRVAGSVAVVQRYPDAHALAQPSHAAHVVA--IFHYLHALNAHAVNANA

Query:  NANA
        + NA
Subjt:  NANA

KAG6586497.1 hypothetical protein SDJN03_19230, partial [Cucurbita argyrosperma subsp. sororia]3.2e-1860.58Show/hide
Query:  RGFAVAVILDVRYISKSHPAATVTIHVNVYLAAAVNYRSGSVSGSVVGSVGSVVGSVDRVAGSVAVVQRYPDAHALAQPSHAAHVVAIFHYLHALNAHAV
        RGFAVA +LD R ISK+HPA  V IHVN Y AAAV Y+S                      GSVA+VQ YPDAHALAQ  HAA+ V IFHYLHALNAHAV
Subjt:  RGFAVAVILDVRYISKSHPAATVTIHVNVYLAAAVNYRSGSVSGSVVGSVGSVVGSVDRVAGSVAVVQRYPDAHALAQPSHAAHVVAIFHYLHALNAHAV

Query:  NANA
        NANA
Subjt:  NANA

KAG7021355.1 hypothetical protein SDJN02_18044, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2763.08Show/hide
Query:  PIDIRSIAADVNFGNGS-VDSPVVSYRGFAVAVILDVRYISKSHPAATVTIHVNVYLAAAVNYRSGSVSGSVVGSVGSVVGSVDRVAGSVAVVQRYPDAH
        P+   SIAADVNFGNGS VDSP VS RGFAVA +LD R ISK+HPA  V IHVN Y AAAV Y+S                      GSVA+VQ YPDAH
Subjt:  PIDIRSIAADVNFGNGS-VDSPVVSYRGFAVAVILDVRYISKSHPAATVTIHVNVYLAAAVNYRSGSVSGSVVGSVGSVVGSVDRVAGSVAVVQRYPDAH

Query:  ALAQPSHAAHVVAIFHYLHALNAHAVNANA
        ALAQ  HAA+ V IFHYLHALNAHAVNANA
Subjt:  ALAQPSHAAHVVAIFHYLHALNAHAVNANA

KAG7030517.1 Guanine nucleotide-binding protein subunit gamma 3, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-5564.95Show/hide
Query:  MATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE---------------------------IPIDIRSIAADVNFGNGSVDSP
        MATPTRPASSSS+PSLPPPYPKSPP+YPDLYGKRRQ AKLQMLEREIGFLE                            P+   SIAADVNFGNGSVDSP
Subjt:  MATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE---------------------------IPIDIRSIAADVNFGNGSVDSP

Query:  VVSYRGFAVAVILDVRYISKSHPAATVTIHVNVYLAAAVNYRSGSVSGSVVGSVGSVVGSVDRVAGSVAVVQRYPDAHALAQPSHAAHVVAIFHYL--HA
        VV+Y GFAVAV+LD R I KSHPAATV IHVN Y  AAVNY SGSV+           GSV    G V++VQRYPDA A+ QPSHAA+VVA+ HYL   A
Subjt:  VVSYRGFAVAVILDVRYISKSHPAATVTIHVNVYLAAAVNYRSGSVSGSVVGSVGSVVGSVDRVAGSVAVVQRYPDAHALAQPSHAAHVVAIFHYL--HA

Query:  LNAHAVNANANANA
        LNA AVNANANANA
Subjt:  LNAHAVNANANANA

TrEMBL top hitse value%identityAlignment
A0A5A7UZX5 Guanine nucleotide-binding protein subunit gamma 3-like3.7e-4454.47Show/hide
Query:  ATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLEIPIDIR----------SIAADVNFGNG-----------------------
        ATPTRP SSSS  S+PPPYPKSPP+YPDLYGKRRQ AKLQML+REIGFLE  +                AD    N                        
Subjt:  ATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLEIPIDIR----------SIAADVNFGNG-----------------------

Query:  ---------------SVDSPVVSYRGFAVAVILDVRYISKSHPAATVTIHVNVYLAAAVNYRSGSVSGSVVGSVGSVVGSVDRVAGSVAVVQRYPDAHAL
                        VDSPVVSY GFAVAV+LD R ISKS PAATV   VN Y  AAVNYRSG V GSVVGSV           G VA+VQ YP+AHAL
Subjt:  ---------------SVDSPVVSYRGFAVAVILDVRYISKSHPAATVTIHVNVYLAAAVNYRSGSVSGSVVGSVGSVVGSVDRVAGSVAVVQRYPDAHAL

Query:  AQPSHAAHVVAIFHYL--HALNAHAVNANANANAR
         QPSHAA+VVAIFHYL   A + HAVNANANANA+
Subjt:  AQPSHAAHVVAIFHYL--HALNAHAVNANANANAR

A0A6J1G3S6 guanine nucleotide-binding protein subunit gamma 3-like isoform X28.5e-1792.16Show/hide
Query:  MATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE
        MATPTRPASSSS+PSLPPPYPKSPP+YPDLYGKRRQ AK+QMLEREIGFLE
Subjt:  MATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE

A0A6J1G3W8 guanine nucleotide-binding protein subunit gamma 3-like isoform X18.5e-1792.16Show/hide
Query:  MATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE
        MATPTRPASSSS+PSLPPPYPKSPP+YPDLYGKRRQ AK+QMLEREIGFLE
Subjt:  MATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE

A0A6J1KGS0 guanine nucleotide-binding protein subunit gamma 3-like isoform X18.5e-1792.16Show/hide
Query:  MATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE
        MATPTRPASSSS+PSLPPPYPKSPP+YPDLYGKRRQ AK+QMLEREIGFLE
Subjt:  MATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE

A0A6J1KJF9 guanine nucleotide-binding protein subunit gamma 3-like isoform X28.5e-1792.16Show/hide
Query:  MATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE
        MATPTRPASSSS+PSLPPPYPKSPP+YPDLYGKRRQ AK+QMLEREIGFLE
Subjt:  MATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE

SwissProt top hitse value%identityAlignment
Q6AWT8 Guanine nucleotide-binding protein subunit gamma 31.8e-1182.22Show/hide
Query:  SSSSL--PSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE
        SSSSL   SLPPP PKSPPEYPDLYGKRR+ A++QMLEREIGFLE
Subjt:  SSSSL--PSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE

Arabidopsis top hitse value%identityAlignment
AT5G20635.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: keratin filament, chloroplast; CONTAINS InterPro DOMAIN/s: Keratin, high sulphur B2 protein (InterPro:IPR002494); Has 6153 Blast hits to 2882 proteins in 265 species: Archae - 6; Bacteria - 47; Metazoa - 4777; Fungi - 68; Plants - 187; Viruses - 30; Other Eukaryotes - 1038 (source: NCBI BLink).1.3e-1282.22Show/hide
Query:  SSSSL--PSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE
        SSSSL   SLPPP PKSPPEYPDLYGKRR+ A++QMLEREIGFLE
Subjt:  SSSSL--PSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTCCCACTCGCCCAGCTTCCTCTTCTTCACTTCCCTCCCTCCCTCCCCCCTACCCCAAGTCGCCTCCTGAGTATCCAGATTTGTATGGGAAGCGCCGACAGAC
AGCCAAGCTTCAGATGCTCGAGAGGGAGATTGGTTTTCTCGAGATCCCAATTGATATAAGAAGCATAGCCGCAGATGTCAATTTTGGAAATGGCTCTGTGGATTCCCCTG
TTGTAAGTTATCGTGGATTTGCTGTTGCTGTTATTCTGGATGTTCGATACATCTCGAAATCCCACCCTGCTGCAACTGTAACAATCCATGTAAATGTCTATCTTGCGGCA
GCTGTAAATTACCGAAGTGGAAGTGTTTCGGGCAGTGTTGTGGGGAGTGTGGGCAGTGTTGTGGGCAGTGTGGACCGTGTTGCGGGCAGTGTTGCGGTTGTCCAACGCTA
CCCCGATGCTCATGCTCTTGCCCAACCATCTCATGCAGCCCATGTTGTTGCCATTTTTCATTACCTTCATGCCCTGAATGCCCATGCTGTGAATGCAAATGCAAATGCAA
ATGCTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTCCCACTCGCCCAGCTTCCTCTTCTTCACTTCCCTCCCTCCCTCCCCCCTACCCCAAGTCGCCTCCTGAGTATCCAGATTTGTATGGGAAGCGCCGACAGAC
AGCCAAGCTTCAGATGCTCGAGAGGGAGATTGGTTTTCTCGAGATCCCAATTGATATAAGAAGCATAGCCGCAGATGTCAATTTTGGAAATGGCTCTGTGGATTCCCCTG
TTGTAAGTTATCGTGGATTTGCTGTTGCTGTTATTCTGGATGTTCGATACATCTCGAAATCCCACCCTGCTGCAACTGTAACAATCCATGTAAATGTCTATCTTGCGGCA
GCTGTAAATTACCGAAGTGGAAGTGTTTCGGGCAGTGTTGTGGGGAGTGTGGGCAGTGTTGTGGGCAGTGTGGACCGTGTTGCGGGCAGTGTTGCGGTTGTCCAACGCTA
CCCCGATGCTCATGCTCTTGCCCAACCATCTCATGCAGCCCATGTTGTTGCCATTTTTCATTACCTTCATGCCCTGAATGCCCATGCTGTGAATGCAAATGCAAATGCAA
ATGCTCGTTAG
Protein sequenceShow/hide protein sequence
MATPTRPASSSSLPSLPPPYPKSPPEYPDLYGKRRQTAKLQMLEREIGFLEIPIDIRSIAADVNFGNGSVDSPVVSYRGFAVAVILDVRYISKSHPAATVTIHVNVYLAA
AVNYRSGSVSGSVVGSVGSVVGSVDRVAGSVAVVQRYPDAHALAQPSHAAHVVAIFHYLHALNAHAVNANANANAR