; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003581 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003581
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold4:45366504..45368224
RNA-Seq ExpressionSpg003581
SyntenySpg003581
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-5349.8Show/hide
Query:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEA---
        MFLV+L+  + L +  SLL+QI+ +AD++FT    S+ A  SH S  F ATLQ+  R FT YSVDH +++++SL+SF  A+LDG SFSS++I +LE+   
Subjt:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEA---

Query:  ISLTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE
        + L +E+ S    P LH EL  SP Q E LGQV  GK+F + SK LR+II E   F +DL V V  T ++VKFSI SKEI +TKE  +C  VGY E EDE
Subjt:  ISLTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE

Query:  TQFQITLQPTSFFINLTYKGNMIWFHKTTDSRSVLSTQVFQLYAEYAIYFPQM
        T+  IT +P  FF+N TYK N +WF+KTT+S+SV+S   F +Y +Y +YFP++
Subjt:  TQFQITLQPTSFFINLTYKGNMIWFHKTTDSRSVLSTQVFQLYAEYAIYFPQM

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]5.8e-4749.42Show/hide
Query:  MFLVKLENSDLLENVASLLSQIA-SEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS
        MFLVKL+N D L +  S L+QI+   ADLKFTPS+F I A  SH S  F ATLQL  ++FT +SVD+ H++++SL+SF  A+LDG SF+S+TI LL+  +
Subjt:  MFLVKLENSDLLENVASLLSQIA-SEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS

Query:  ---LTFESLSYCGWPCLHRELMFSPSQGED--LGQ--VVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYN
           L F++ S    P LH EL  SP Q ED  +GQ  +   KYF + SK LRRII +   FQ D  + V  T S+VKFSI SKEIILT E  HC   G+ 
Subjt:  ---LTFESLSYCGWPCLHRELMFSPSQGED--LGQ--VVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYN

Query:  EREDETQFQITLQPTSFFINLTYKGNMIWFHKT-TDSRSVLSTQVFQLYAEYAIYFP
        E E ETQFQI L P  FF+N TYK N +WF+KT  ++ +++    + ++ +Y IYFP
Subjt:  EREDETQFQITLQPTSFFINLTYKGNMIWFHKT-TDSRSVLSTQVFQLYAEYAIYFP

XP_023006010.1 uncharacterized protein LOC111498887 [Cucurbita maxima]4.4e-4747.6Show/hide
Query:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS-
        MFLV+L + D L    SLL+QI++EADLKF+ S+FS+    S+ S  F AT Q+ HR+F  YSVD +H++R+SLQSF  A+ DG  FSS+TI   E  S 
Subjt:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS-

Query:  --LTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE
          L FES ++     +HR L  SPSQ E+LGQ+   ++F+I S+D R II     F  + +++V+ T S+VKF   S+E ILTKE   C  +GY E E E
Subjt:  --LTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE

Query:  TQFQITLQPTSFFINLTYKGNMIWFHKTTDSRSVLSTQVFQLYAEYAIYF
          FQI L P  FF NL+Y    IWF+KT DSR V+    F L A+Y IYF
Subjt:  TQFQITLQPTSFFINLTYKGNMIWFHKTTDSRSVLSTQVFQLYAEYAIYF

XP_023548334.1 uncharacterized protein LOC111807002 [Cucurbita pepo subsp. pepo]1.3e-4647.6Show/hide
Query:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS-
        MFLV+L + D L    S+L+QI+ EADLKF+ S+FS+    S+ SL F AT Q+ HR+F  Y VD +H++R+SLQSF  A+  G  FSS+TI   E  S 
Subjt:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS-

Query:  --LTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE
          L FES ++     +HR L  SPSQ E+LGQ+   ++F+I S+D R I+     F  D +++V+ T SQVKF   S+E ILTKE   CV VGY E + E
Subjt:  --LTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE

Query:  TQFQITLQPTSFFINLTYKGNMIWFHKTTDSRSVLSTQVFQLYAEYAIYF
          FQI L P  FF NL+Y    IWF+KT DSR V+    F L A+Y IYF
Subjt:  TQFQITLQPTSFFINLTYKGNMIWFHKTTDSRSVLSTQVFQLYAEYAIYF

XP_038875055.1 uncharacterized protein LOC120067580 [Benincasa hispida]9.5e-5050.2Show/hide
Query:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLE---A
        MFLVKL N + L +  S L+QI++ AD+KFTP EF + A   + S  F ATLQL  + FT YSVDH HT+++ L+SF  A+LDG SF+S+TI LLE    
Subjt:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLE---A

Query:  ISLTFESLSYCGWPCLHRELMFSPSQGEDL---GQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNER
        + L F++ S    P LH EL FSP Q  D    GQ+  GK+F + S+ LRRII E   FQ+D  V V  T SQ+KFSI SKEI+L  +  HC  VG+ E 
Subjt:  ISLTFESLSYCGWPCLHRELMFSPSQGEDL---GQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNER

Query:  EDETQFQITLQPTSFFINLTYKGNMIWFHKT-TDSRSVLSTQVFQLYAEYAIYFP
        E ETQFQI L+P  FF+N TYK N +WF+KT  +S SV++   F +  +Y IYFP
Subjt:  EDETQFQITLQPTSFFINLTYKGNMIWFHKT-TDSRSVLSTQVFQLYAEYAIYFP

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980101.2e-4552.49Show/hide
Query:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS-
        MFLV+LE  + L +  SLL+Q+A +AD+KFTP    I    S+ S  F ATLQL  R FT +SVDH+ ++++SLQ F  A+LDG SFSS+TI LL+  + 
Subjt:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS-

Query:  --LTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE
          L FE+ S+   P LH EL  SP Q E+LGQV  G +F + S++LRRII E   F +D  V VT T SQVKFSI SKEIILTKE  HC  VGY E E E
Subjt:  --LTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE

Query:  TQFQITLQPTSFFINLTYKGN
        T+ Q+ L+P  FF+N TY+ N
Subjt:  TQFQITLQPTSFFINLTYKGN

A0A1S3CL88 uncharacterized protein LOC1035022502.8e-4749.42Show/hide
Query:  MFLVKLENSDLLENVASLLSQIA-SEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS
        MFLVKL+N D L +  S L+QI+   ADLKFTPS+F I A  SH S  F ATLQL  ++FT +SVD+ H++++SL+SF  A+LDG SF+S+TI LL+  +
Subjt:  MFLVKLENSDLLENVASLLSQIA-SEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS

Query:  ---LTFESLSYCGWPCLHRELMFSPSQGED--LGQ--VVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYN
           L F++ S    P LH EL  SP Q ED  +GQ  +   KYF + SK LRRII +   FQ D  + V  T S+VKFSI SKEIILT E  HC   G+ 
Subjt:  ---LTFESLSYCGWPCLHRELMFSPSQGED--LGQ--VVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYN

Query:  EREDETQFQITLQPTSFFINLTYKGNMIWFHKT-TDSRSVLSTQVFQLYAEYAIYFP
        E E ETQFQI L P  FF+N TYK N +WF+KT  ++ +++    + ++ +Y IYFP
Subjt:  EREDETQFQITLQPTSFFINLTYKGNMIWFHKT-TDSRSVLSTQVFQLYAEYAIYFP

A0A6J1DM64 uncharacterized protein LOC1110222798.7e-4143.7Show/hide
Query:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRL---LEA
        MF ++L + D + N  S+L+Q+++ AD  F+   FSI     + S  F ATLQ+   +F+ YSVD +   R+ + SFR A+L+G  F S+T+        
Subjt:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRL---LEA

Query:  ISLTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE
        + L FES SY  +  L R+L  S SQ +DLG V + K+F+I+S D RRII E + +     ++ T T SQV+F I  +EI+LTKE  HCV  GY  R  E
Subjt:  ISLTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE

Query:  TQFQITLQPTSFFINLTYKGNMIWFHKTTDSRS-VLSTQVFQLYAEYAIYFPQM
         QFQ++L+P  FFINL+Y+   IWF KTT+SRS V+    F  YA+Y IYFPQ+
Subjt:  TQFQITLQPTSFFINLTYKGNMIWFHKTTDSRS-VLSTQVFQLYAEYAIYFPQM

A0A6J1H2Z8 uncharacterized protein LOC1114600111.2e-4546.8Show/hide
Query:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS-
        MFLV+L + D L    S+L+QI++EADLKF+ S+FS+  S   H   F AT Q+ HR+F  Y VD +H++R+SLQSF  A+  G  FSS+TI   E  S 
Subjt:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS-

Query:  --LTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE
          L FES ++     +HR L  SPSQ E+LGQ+   ++F+I S+D R II     F  + +++V+ T S+VKF   S+E ILTKE   CV VGY E + E
Subjt:  --LTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE

Query:  TQFQITLQPTSFFINLTYKGNMIWFHKTTDSRSVLSTQVFQLYAEYAIYF
          FQI L P  FF NL+Y    IWF+KT DSR V+    F L A+Y IYF
Subjt:  TQFQITLQPTSFFINLTYKGNMIWFHKTTDSRSVLSTQVFQLYAEYAIYF

A0A6J1KZ05 uncharacterized protein LOC1114988872.1e-4747.6Show/hide
Query:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS-
        MFLV+L + D L    SLL+QI++EADLKF+ S+FS+    S+ S  F AT Q+ HR+F  YSVD +H++R+SLQSF  A+ DG  FSS+TI   E  S 
Subjt:  MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAIS-

Query:  --LTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE
          L FES ++     +HR L  SPSQ E+LGQ+   ++F+I S+D R II     F  + +++V+ T S+VKF   S+E ILTKE   C  +GY E E E
Subjt:  --LTFESLSYCGWPCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDE

Query:  TQFQITLQPTSFFINLTYKGNMIWFHKTTDSRSVLSTQVFQLYAEYAIYF
          FQI L P  FF NL+Y    IWF+KT DSR V+    F L A+Y IYF
Subjt:  TQFQITLQPTSFFINLTYKGNMIWFHKTTDSRSVLSTQVFQLYAEYAIYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTGAAGCTCGAGAACTCTGATCTTCTTGAAAATGTAGCCTCCCTACTCTCTCAAATCGCCAGCGAAGCCGACCTGAAATTCACACCGTCGGAGTTCTCCAT
AACCGCCTCACAGTCCCACCATTCCCTTCCCTTCGCCGCAACGCTGCAATTGAGACACCGATACTTCACCAAGTATTCCGTGGATCACAGCCACACTGCCAGAATTTCCC
TTCAATCCTTCCGCCAAGCTCTGTTGGACGGCGCAAGTTTTTCTTCACTCACCATTCGTCTTCTCGAAGCCATTTCCCTTACGTTTGAGAGTTTGAGTTACTGTGGTTGG
CCATGCTTGCATCGTGAATTGATGTTCTCGCCTTCGCAAGGGGAGGATTTAGGCCAAGTTGTACGTGGGAAATATTTTGCAATTTATTCTAAAGATTTAAGACGCATTAT
AATGGAATTCTCTCACTTTCAAGAAGATTTAGCAGTTTATGTTACGCGAACGAAGTCACAAGTGAAGTTTTCTATTCCATCTAAGGAGATTATTCTTACCAAAGAGGATG
ATCACTGTGTAACGGTAGGTTATAATGAAAGAGAGGATGAAACTCAATTCCAAATCACTCTCCAACCCACGTCATTTTTCATTAATCTGACATACAAAGGGAATATGATA
TGGTTTCATAAAACAACCGATTCTCGCAGCGTACTCAGTACCCAAGTTTTTCAATTGTATGCTGAATATGCGATCTATTTTCCTCAAATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTGAAGCTCGAGAACTCTGATCTTCTTGAAAATGTAGCCTCCCTACTCTCTCAAATCGCCAGCGAAGCCGACCTGAAATTCACACCGTCGGAGTTCTCCAT
AACCGCCTCACAGTCCCACCATTCCCTTCCCTTCGCCGCAACGCTGCAATTGAGACACCGATACTTCACCAAGTATTCCGTGGATCACAGCCACACTGCCAGAATTTCCC
TTCAATCCTTCCGCCAAGCTCTGTTGGACGGCGCAAGTTTTTCTTCACTCACCATTCGTCTTCTCGAAGCCATTTCCCTTACGTTTGAGAGTTTGAGTTACTGTGGTTGG
CCATGCTTGCATCGTGAATTGATGTTCTCGCCTTCGCAAGGGGAGGATTTAGGCCAAGTTGTACGTGGGAAATATTTTGCAATTTATTCTAAAGATTTAAGACGCATTAT
AATGGAATTCTCTCACTTTCAAGAAGATTTAGCAGTTTATGTTACGCGAACGAAGTCACAAGTGAAGTTTTCTATTCCATCTAAGGAGATTATTCTTACCAAAGAGGATG
ATCACTGTGTAACGGTAGGTTATAATGAAAGAGAGGATGAAACTCAATTCCAAATCACTCTCCAACCCACGTCATTTTTCATTAATCTGACATACAAAGGGAATATGATA
TGGTTTCATAAAACAACCGATTCTCGCAGCGTACTCAGTACCCAAGTTTTTCAATTGTATGCTGAATATGCGATCTATTTTCCTCAAATGTGA
Protein sequenceShow/hide protein sequence
MFLVKLENSDLLENVASLLSQIASEADLKFTPSEFSITASQSHHSLPFAATLQLRHRYFTKYSVDHSHTARISLQSFRQALLDGASFSSLTIRLLEAISLTFESLSYCGW
PCLHRELMFSPSQGEDLGQVVRGKYFAIYSKDLRRIIMEFSHFQEDLAVYVTRTKSQVKFSIPSKEIILTKEDDHCVTVGYNEREDETQFQITLQPTSFFINLTYKGNMI
WFHKTTDSRSVLSTQVFQLYAEYAIYFPQM