; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003594 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003594
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionElf4 domain-containing protein
Genome locationscaffold4:49106459..49106812
RNA-Seq ExpressionSpg003594
SyntenySpg003594
Gene Ontology termsGO:0009649 - entrainment of circadian clock (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8534789.1 hypothetical protein F0562_029769 [Nyssa sinensis]5.6e-4586.09Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEGETFS  G+GNG+Q+DGK+LQTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLY DLS+SFTKSMEASSEGDS+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNRP
        A++ D K GHKRNRP
Subjt:  AIRPDVKPGHKRNRP

XP_006381644.1 protein ELF4-LIKE 3 [Populus trichocarpa]2.5e-4586.96Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+TFS  G+GNG+QIDGK+LQTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSM+ASSEGDS+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNRP
        A++ D K GHKRNRP
Subjt:  AIRPDVKPGHKRNRP

XP_021596442.1 protein ELF4-LIKE 3-like [Manihot esculenta]1.9e-4586.96Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+TFS  G+GNG+QIDGK+LQTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLS+SF+KSMEASSEGDS+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNRP
        A+R D K GHKRNRP
Subjt:  AIRPDVKPGHKRNRP

XP_021606568.1 protein ELF4-LIKE 3-like [Manihot esculenta]1.1e-4586.96Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+TFS  G+GNG+QIDGK+LQTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLS+SFTKSMEASSEGDS+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNRP
        A++ D K GHKRNRP
Subjt:  AIRPDVKPGHKRNRP

XP_022946747.1 protein ELF4-LIKE 3-like [Cucurbita moschata]3.3e-4587.18Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEGET SSGG+GNG Q+DGKM QTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNL+RNVGLIRELNNNIRRVVDLYA LS SFTKSMEASSEG+SAA
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNRPPP
              KPGHKRNRPPP
Subjt:  AIRPDVKPGHKRNRPPP

TrEMBL top hitse value%identityAlignment
A0A251JFU2 Elf4 domain-containing protein9.3e-4686.96Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+TFS  G+GNG+QIDGK+LQTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLS+SF+KSMEASSEGDS+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNRP
        A+R D K GHKRNRP
Subjt:  AIRPDVKPGHKRNRP

A0A2C9W4E0 Elf4 domain-containing protein5.5e-4686.96Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+TFS  G+GNG+QIDGK+LQTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLS+SFTKSMEASSEGDS+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNRP
        A++ D K GHKRNRP
Subjt:  AIRPDVKPGHKRNRP

A0A4U5QTY9 Elf4 domain-containing protein1.2e-4586.96Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+TFS  G+GNG+QIDGK+LQTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSM+ASSEGDS+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNRP
        A++ D K GHKRNRP
Subjt:  AIRPDVKPGHKRNRP

A0A6M2ESE4 Elf4 domain-containing protein1.2e-4586.96Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+TFS  G+GNG+QIDGK+LQTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSM+ASSEGDS+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNRP
        A++ D K GHKRNRP
Subjt:  AIRPDVKPGHKRNRP

B9MSX7 Elf4 domain-containing protein1.2e-4586.96Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+TFS  G+GNG+QIDGK+LQTFQKNFVQVQNILDQNRLLINEINQNHESK+PDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSM+ASSEGDS+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNRP
        A++ D K GHKRNRP
Subjt:  AIRPDVKPGHKRNRP

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 47.4e-1649.37Show/hide
Query:  DGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEG
        D  M +   +NF QVQ++LD+NR LI ++N NH+S+M DN+S+NV LI+ELN NI +VV++Y+DL+TSF+        G
Subjt:  DGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEG

O80877 Protein ELF4-LIKE 15.9e-1344.71Show/hide
Query:  DGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSME----ASSEGDS
        D ++  T    F + Q  LDQNR LI  +N+NH S++PDN+SRNVGLI E+N NI +V+++Y+DLS +F K  +     + +GD+
Subjt:  DGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSME----ASSEGDS

Q570U6 Protein ELF4-LIKE 45.1e-3365.79Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+  S  G G+   +DGK+LQ+FQK+FV VQ+ILDQNRLLINEINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF +S++ASSEG+S+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNR
         ++ D K   KR R
Subjt:  AIRPDVKPGHKRNR

Q8S8F5 Protein ELF4-LIKE 32.7e-3469.57Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+T S   +G+G Q+DGK+LQTF+K+FVQVQNILD NRLLINEINQNHESK+PDNL RNVGLIRELNNN+RRV  LY DLS +F+KSMEASSEGDS+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNRP
                G++R RP
Subjt:  AIRPDVKPGHKRNRP

Q94BS8 Protein ELF4-LIKE 22.2e-3164.29Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+ +S  G G   Q+DGK+LQ FQK+FVQVQ+ILDQNRLLINEINQNHESK  D+L RNVGLIRELNNNIR V  LY DLS SF +S++ASSEG+S  
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKR
         ++ D K  +++
Subjt:  AIRPDVKPGHKR

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 43.6e-3465.79Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+  S  G G+   +DGK+LQ+FQK+FV VQ+ILDQNRLLINEINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF +S++ASSEG+S+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNR
         ++ D K   KR R
Subjt:  AIRPDVKPGHKRNR

AT1G17455.2 ELF4-like 43.6e-3465.79Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+  S  G G+   +DGK+LQ+FQK+FV VQ+ILDQNRLLINEINQNHESK PDNL RNVGLI+ELNNNIRRV  LY DLS SF +S++ASSEG+S+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNR
         ++ D K   KR R
Subjt:  AIRPDVKPGHKRNR

AT1G72630.1 ELF4-like 21.5e-3264.29Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+ +S  G G   Q+DGK+LQ FQK+FVQVQ+ILDQNRLLINEINQNHESK  D+L RNVGLIRELNNNIR V  LY DLS SF +S++ASSEG+S  
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKR
         ++ D K  +++
Subjt:  AIRPDVKPGHKR

AT2G06255.1 ELF4-like 31.9e-3569.57Show/hide
Query:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA
        MEG+T S   +G+G Q+DGK+LQTF+K+FVQVQNILD NRLLINEINQNHESK+PDNL RNVGLIRELNNN+RRV  LY DLS +F+KSMEASSEGDS+ 
Subjt:  MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAA

Query:  AIRPDVKPGHKRNRP
                G++R RP
Subjt:  AIRPDVKPGHKRNRP

AT2G40080.1 Protein of unknown function (DUF1313)5.3e-1749.37Show/hide
Query:  DGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEG
        D  M +   +NF QVQ++LD+NR LI ++N NH+S+M DN+S+NV LI+ELN NI +VV++Y+DL+TSF+        G
Subjt:  DGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGGGAGACATTCTCATCAGGAGGAGTTGGAAATGGAAGCCAAATTGATGGGAAAATGCTGCAGACATTTCAGAAGAATTTCGTTCAAGTTCAGAACATTTTGGA
CCAAAACAGATTGCTGATCAATGAAATTAACCAAAACCACGAGTCCAAAATGCCCGACAATCTCAGCAGAAACGTCGGTCTGATTCGCGAGCTCAACAACAACATCAGAA
GGGTTGTTGATCTCTACGCCGATCTCTCCACTTCCTTCACCAAATCCATGGAGGCTTCCTCGGAAGGAGACTCCGCCGCCGCCATCAGACCCGACGTCAAGCCTGGCCAC
AAGCGCAACCGCCCTCCGCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGGGAGACATTCTCATCAGGAGGAGTTGGAAATGGAAGCCAAATTGATGGGAAAATGCTGCAGACATTTCAGAAGAATTTCGTTCAAGTTCAGAACATTTTGGA
CCAAAACAGATTGCTGATCAATGAAATTAACCAAAACCACGAGTCCAAAATGCCCGACAATCTCAGCAGAAACGTCGGTCTGATTCGCGAGCTCAACAACAACATCAGAA
GGGTTGTTGATCTCTACGCCGATCTCTCCACTTCCTTCACCAAATCCATGGAGGCTTCCTCGGAAGGAGACTCCGCCGCCGCCATCAGACCCGACGTCAAGCCTGGCCAC
AAGCGCAACCGCCCTCCGCCGTAG
Protein sequenceShow/hide protein sequence
MEGETFSSGGVGNGSQIDGKMLQTFQKNFVQVQNILDQNRLLINEINQNHESKMPDNLSRNVGLIRELNNNIRRVVDLYADLSTSFTKSMEASSEGDSAAAIRPDVKPGH
KRNRPPP