; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003641 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003641
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAlba domain-containing protein
Genome locationscaffold4:47748038..47750186
RNA-Seq ExpressionSpg003641
SyntenySpg003641
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599408.1 hypothetical protein SDJN03_09186, partial [Cucurbita argyrosperma subsp. sororia]3.6e-5693.13Show/hide
Query:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+SMNL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGLAVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERGEIGDADEQS
        EI+LGKTENFDELMAAAAEER E GDADEQS
Subjt:  EIVLGKTENFDELMAAAAEERGEIGDADEQS

XP_004139317.1 uncharacterized protein At2g34160 [Cucumis sativus]1.7e-5895.42Show/hide
Query:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL+SDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLA+EKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERGEIGDADEQS
        EI+LGKTENFDELMAAAAEERGEIG+ADEQS
Subjt:  EIVLGKTENFDELMAAAAEERGEIGDADEQS

XP_008457716.1 PREDICTED: uncharacterized protein At2g34160-like [Cucumis melo]2.6e-5996.95Show/hide
Query:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL+SDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERGEIGDADEQS
        EI+LGKTENFDELMAAAAEERGEIGDADEQS
Subjt:  EIVLGKTENFDELMAAAAEERGEIGDADEQS

XP_022946216.1 uncharacterized protein At2g34160-like [Cucurbita moschata]3.6e-5693.13Show/hide
Query:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+SMNL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGLAVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERGEIGDADEQS
        EI+LGKTENFDELMAAAAEER E GDADEQS
Subjt:  EIVLGKTENFDELMAAAAEERGEIGDADEQS

XP_038890892.1 uncharacterized protein At2g34160-like [Benincasa hispida]3.2e-5793.28Show/hide
Query:  MEEIVEGVNSMNLAS---DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQK
        MEEIVEGVNSMNL+S   DS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLA+EKKIATSTVDIKDDSRGRPVQK
Subjt:  MEEIVEGVNSMNLAS---DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQK

Query:  AKIEIVLGKTENFDELMAAAAEERGEIGDADEQS
        AKIEI+LGKT+NFDELMAAAAEERGEIGDADEQS
Subjt:  AKIEIVLGKTENFDELMAAAAEERGEIGDADEQS

TrEMBL top hitse value%identityAlignment
A0A1S3C651 uncharacterized protein At2g34160-like1.3e-5996.95Show/hide
Query:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL+SDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERGEIGDADEQS
        EI+LGKTENFDELMAAAAEERGEIGDADEQS
Subjt:  EIVLGKTENFDELMAAAAEERGEIGDADEQS

A0A5D3BH52 DNA/RNA-binding protein Alba-like protein1.3e-5996.95Show/hide
Query:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL+SDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQH+EVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERGEIGDADEQS
        EI+LGKTENFDELMAAAAEERGEIGDADEQS
Subjt:  EIVLGKTENFDELMAAAAEERGEIGDADEQS

A0A6J1CNW3 uncharacterized protein At2g34160-like3.8e-5691.6Show/hide
Query:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGVNS+NL  D +KKNRIQVSNTKKPLFFYVNLAKRYMQQH EVELSALGMAIATVVTVAEILKNNGL VEKKIATSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERGEIGDADEQS
        EI+LGKTENFDELMAAAAEERG+ GD DEQS
Subjt:  EIVLGKTENFDELMAAAAEERGEIGDADEQS

A0A6J1G312 uncharacterized protein At2g34160-like1.7e-5693.13Show/hide
Query:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+SMNL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGLAVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERGEIGDADEQS
        EI+LGKTENFDELMAAAAEER E GDADEQS
Subjt:  EIVLGKTENFDELMAAAAEERGEIGDADEQS

A0A6J1KJN4 uncharacterized protein At2g34160-like2.9e-5693.13Show/hide
Query:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEIVEGV+SMNL SDS+KKNRIQVSNTKKPLFFYVNLAKRYMQQH+ VELSALGMAIATVVTVAEILKNNGLAVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERGEIGDADEQS
        EI LGKTENFDELMAAAAEER E GDADEQS
Subjt:  EIVLGKTENFDELMAAAAEERGEIGDADEQS

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341601.7e-4885.12Show/hide
Query:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI +GVN+MNLA+DS KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAIATVVTV EILKNNG AVEKKI TSTVDIKDD+RGRPVQKAKI
Subjt:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEER
        EI L K+E FDELMAAA EE+
Subjt:  EIVLGKTENFDELMAAAAEER

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein6.3e-5183.21Show/hide
Query:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI EGVN+MNLA D+ KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAIATVVTVAEILKNNG AVEKKI TSTVDIKDDSRGRPVQKAKI
Subjt:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEERGEIGDADEQS
        EI L K+E FDELMAAA EE+ E  +A EQ+
Subjt:  EIVLGKTENFDELMAAAAEERGEIGDADEQS

AT2G34160.1 Alba DNA/RNA-binding protein1.2e-4985.12Show/hide
Query:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI
        MEEI +GVN+MNLA+DS KKNRIQVSNTKKPLFFYVNLAKRYMQQ+ +VELSALGMAIATVVTV EILKNNG AVEKKI TSTVDIKDD+RGRPVQKAKI
Subjt:  MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKI

Query:  EIVLGKTENFDELMAAAAEER
        EI L K+E FDELMAAA EE+
Subjt:  EIVLGKTENFDELMAAAAEER

AT3G04620.1 Alba DNA/RNA-binding protein5.1e-3776.77Show/hide
Query:  DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM
        ++ KKNRIQVSNTKKPLFFYVNLAKRY+QQH EVELSALGMAI TVVT++EILKNNGLA EKK+ TSTV +KD+++G+ VQKAKIEIVLGK++ FD L+
Subjt:  DSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKIEIVLGKTENFDELM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAATTGTAGAAGGTGTGAACTCCATGAACTTGGCCTCCGATTCGTTTAAGAAGAATCGGATTCAGGTCTCCAACACCAAGAAACCCTTGTTCTTCTATGTCAA
TCTCGCTAAGAGATACATGCAGCAGCATGAGGAAGTCGAGCTTTCTGCTCTTGGAATGGCAATTGCCACGGTTGTTACAGTTGCCGAAATTTTGAAAAACAATGGATTGG
CTGTTGAGAAGAAGATCGCAACTTCAACTGTTGATATCAAGGACGACTCGAGAGGAAGACCTGTCCAAAAGGCTAAGATTGAGATAGTGCTGGGTAAAACCGAAAACTTC
GATGAATTGATGGCAGCTGCTGCTGAGGAAAGGGGTGAGATAGGTGACGCAGATGAGCAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAATTGTAGAAGGTGTGAACTCCATGAACTTGGCCTCCGATTCGTTTAAGAAGAATCGGATTCAGGTCTCCAACACCAAGAAACCCTTGTTCTTCTATGTCAA
TCTCGCTAAGAGATACATGCAGCAGCATGAGGAAGTCGAGCTTTCTGCTCTTGGAATGGCAATTGCCACGGTTGTTACAGTTGCCGAAATTTTGAAAAACAATGGATTGG
CTGTTGAGAAGAAGATCGCAACTTCAACTGTTGATATCAAGGACGACTCGAGAGGAAGACCTGTCCAAAAGGCTAAGATTGAGATAGTGCTGGGTAAAACCGAAAACTTC
GATGAATTGATGGCAGCTGCTGCTGAGGAAAGGGGTGAGATAGGTGACGCAGATGAGCAGAGTTAA
Protein sequenceShow/hide protein sequence
MEEIVEGVNSMNLASDSFKKNRIQVSNTKKPLFFYVNLAKRYMQQHEEVELSALGMAIATVVTVAEILKNNGLAVEKKIATSTVDIKDDSRGRPVQKAKIEIVLGKTENF
DELMAAAAEERGEIGDADEQS