; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003648 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003648
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAlba domain-containing protein
Genome locationscaffold4:46305249..46307452
RNA-Seq ExpressionSpg003648
SyntenySpg003648
Gene Ontology termsGO:0048235 - pollen sperm cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR002775 - DNA/RNA-binding protein Alba-like
IPR014560 - Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related
IPR036882 - Alba-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139384.1 uncharacterized protein At2g34160 [Cucumis sativus]5.6e-5593.01Show/hide
Query:  ATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGA  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAAPEPAAVAVAAAAATEEKKAEESKEEQ
        LGKSEKFDSLMTAATA PE   V   AAAA EEKKAEESKEEQ
Subjt:  LGKSEKFDSLMTAATAAPEPAAVAVAAAAATEEKKAEESKEEQ

XP_008456222.1 PREDICTED: uncharacterized protein At2g34160 [Cucumis melo]9.6e-5591.67Show/hide
Query:  MATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MATIAVSGA  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTAATAAPEPAAVAVAAAAATEEKKAEESKEEQ
        VLGKSEKFDSLMTAATA PE   V   AAA  EEKKAEE+KEEQ
Subjt:  VLGKSEKFDSLMTAATAAPEPAAVAVAAAAATEEKKAEESKEEQ

XP_022946134.1 uncharacterized protein At2g34160-like isoform X1 [Cucurbita moschata]6.2e-5484.18Show/hide
Query:  MATIAVSG-----------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
        MAT+AVSG           AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
Subjt:  MATIAVSG-----------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR

Query:  LVQKAKIEIVLGKSEKFDSLMTAATAAPEPA-----AVAVAAAAATEEKKAEESKEEQ
        LVQKAKIEIVLGKSEKFDSLMTAAT  PEPA     A A+AA  A EEKK EESKEEQ
Subjt:  LVQKAKIEIVLGKSEKFDSLMTAATAAPEPA-----AVAVAAAAATEEKKAEESKEEQ

XP_023521159.1 uncharacterized protein At2g34160-like isoform X1 [Cucurbita pepo subsp. pepo]5.2e-5381.21Show/hide
Query:  MATIAVSG-----------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
        MAT+AVSG           AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
Subjt:  MATIAVSG-----------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR

Query:  LVQKAKIEIVLGKSEKFDSLMTAATAAPEPAA------------VAVAAAAATEEKKAEESKEEQ
        LVQKAKIEIVLGKSEKFDSLMTAATA PE AA             A AA AA EEKK EESKEEQ
Subjt:  LVQKAKIEIVLGKSEKFDSLMTAATAAPEPAA------------VAVAAAAATEEKKAEESKEEQ

XP_038877259.1 uncharacterized protein At2g34160-like [Benincasa hispida]1.2e-5492.31Show/hide
Query:  MATIAVSG-AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        MATIAVSG AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  MATIAVSG-AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAAPEPA-AVAVAAAAATEEKKAEESKEE
        LGKSEKFDSLMTAATA PE    VA  AAAA EEKKAEE+KE+
Subjt:  LGKSEKFDSLMTAATAAPEPA-AVAVAAAAATEEKKAEESKEE

TrEMBL top hitse value%identityAlignment
A0A0A0LG69 Alba domain-containing protein2.7e-5593.01Show/hide
Query:  ATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
        ATIAVSGA  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV
Subjt:  ATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIV

Query:  LGKSEKFDSLMTAATAAPEPAAVAVAAAAATEEKKAEESKEEQ
        LGKSEKFDSLMTAATA PE   V   AAAA EEKKAEESKEEQ
Subjt:  LGKSEKFDSLMTAATAAPEPAAVAVAAAAATEEKKAEESKEEQ

A0A1S3C2U1 uncharacterized protein At2g341604.6e-5591.67Show/hide
Query:  MATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MATIAVSGA  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTAATAAPEPAAVAVAAAAATEEKKAEESKEEQ
        VLGKSEKFDSLMTAATA PE   V   AAA  EEKKAEE+KEEQ
Subjt:  VLGKSEKFDSLMTAATAAPEPAAVAVAAAAATEEKKAEESKEEQ

A0A5D3D4G4 Alba DNA/RNA-binding protein4.6e-5591.67Show/hide
Query:  MATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
        MATIAVSGA  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI
Subjt:  MATIAVSGA--ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEI

Query:  VLGKSEKFDSLMTAATAAPEPAAVAVAAAAATEEKKAEESKEEQ
        VLGKSEKFDSLMTAATA PE   V   AAA  EEKKAEE+KEEQ
Subjt:  VLGKSEKFDSLMTAATAAPEPAAVAVAAAAATEEKKAEESKEEQ

A0A6J1G2Y0 uncharacterized protein At2g34160-like isoform X13.0e-5484.18Show/hide
Query:  MATIAVSG-----------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
        MAT+AVSG           AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
Subjt:  MATIAVSG-----------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR

Query:  LVQKAKIEIVLGKSEKFDSLMTAATAAPEPA-----AVAVAAAAATEEKKAEESKEEQ
        LVQKAKIEIVLGKSEKFDSLMTAAT  PEPA     A A+AA  A EEKK EESKEEQ
Subjt:  LVQKAKIEIVLGKSEKFDSLMTAATAAPEPA-----AVAVAAAAATEEKKAEESKEEQ

A0A6J1KEC8 uncharacterized protein At2g34160 isoform X11.3e-5280.98Show/hide
Query:  MATIAVSG-----------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
        MAT+AVSG           AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR
Subjt:  MATIAVSG-----------AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGR

Query:  LVQKAKIEIVLGKSEKFDSLMTAATAAPEPA----------AVAVAAAAATEEKKAEESKEEQ
        LVQKAKIEIVLGKSEKFDSLMTAAT  PE A          A   AA AA EEKK EESKEEQ
Subjt:  LVQKAKIEIVLGKSEKFDSLMTAATAAPEPA----------AVAVAAAAATEEKKAEESKEEQ

SwissProt top hitse value%identityAlignment
O22969 Uncharacterized protein At2g341601.4e-3773.91Show/hide
Query:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
        AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD L
Subjt:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL

Query:  MTAATAAPEPAAVAV
        M AA    E A   V
Subjt:  MTAATAAPEPAAVAV

Arabidopsis top hitse value%identityAlignment
AT1G29250.1 Alba DNA/RNA-binding protein1.3e-3867.42Show/hide
Query:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
        A +TQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG A EKK++TSTV +KD+++GR VQKAKIEI L KSEKFD L
Subjt:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL

Query:  MTAATAAPEPAAVAVAAAAATEEKKAEESKEE
        M                AAA EEK+A E++E+
Subjt:  MTAATAAPEPAAVAVAAAAATEEKKAEESKEE

AT2G34160.1 Alba DNA/RNA-binding protein1.0e-3873.91Show/hide
Query:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL
        AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD L
Subjt:  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL

Query:  MTAATAAPEPAAVAV
        M AA    E A   V
Subjt:  MTAATAAPEPAAVAV

AT3G04620.1 Alba DNA/RNA-binding protein2.1e-4478.12Show/hide
Query:  AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDS
        A  ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI+EILKNNGLATEKKVLTSTVGMKDE KG++VQKAKIEIVLGKS+KFDS
Subjt:  AATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDS

Query:  LMTAATAAPEPAAVAVAAAAATEEKKAE
        L+   T    P   A A   A+ E + E
Subjt:  LMTAATAAPEPAAVAVAAAAATEEKKAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACGATTGCAGTATCTGGAGCCGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCGAACACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAG
GTATATTCAACAGCACAATGAGGTTGAGCTTTCTGCATTGGGAATGGCAATCACTACCGTTGTCACAATTGCGGAGATTCTCAAGAACAATGGGCTGGCTACAGAGAAGA
AAGTTTTGACTTCTACAGTCGGCATGAAGGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGATTGAGATCGTTCTGGGAAAGTCTGAGAAATTTGATTCTCTGATG
ACTGCGGCCACAGCTGCGCCAGAGCCAGCAGCAGTTGCAGTTGCAGCTGCAGCAGCAACTGAAGAGAAAAAAGCAGAGGAAAGCAAGGAGGAGCAGCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAACGATTGCAGTATCTGGAGCCGCCACTGAAACACAGAAGAAGAACAGAATTCAGGTTTCGAACACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAG
GTATATTCAACAGCACAATGAGGTTGAGCTTTCTGCATTGGGAATGGCAATCACTACCGTTGTCACAATTGCGGAGATTCTCAAGAACAATGGGCTGGCTACAGAGAAGA
AAGTTTTGACTTCTACAGTCGGCATGAAGGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCCAAGATTGAGATCGTTCTGGGAAAGTCTGAGAAATTTGATTCTCTGATG
ACTGCGGCCACAGCTGCGCCAGAGCCAGCAGCAGTTGCAGTTGCAGCTGCAGCAGCAACTGAAGAGAAAAAAGCAGAGGAAAGCAAGGAGGAGCAGCAGTAG
Protein sequenceShow/hide protein sequence
MATIAVSGAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLM
TAATAAPEPAAVAVAAAAATEEKKAEESKEEQQ