CuGenDBv2

Gene ID	Spg003671
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	BRCA1-associated protein
Genome location	scaffold4:47494558..47499231
RNA-Seq Expression	Spg003671
Synteny	Spg003671
Gene Ontology terms	GO:0010029 - regulation of seed germination (biological process) GO:0016567 - protein ubiquitination (biological process) GO:0000151 - ubiquitin ligase complex (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR033273 - RING domain containing protein BRIZ1/BRIZ2

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7030373.1 BRCA1-associated protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.8e-27

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Query:  MGLTHYTLYDRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN
        +GLT+YTLY REL SLK RNE IHDLEEQIRDLTVYIEAQKTLN IT SDDIKGGT+LPVPAKESSP +GRKKKG RRRN
Subjt:  MGLTHYTLYDRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN

XP_004139299.1 BRAP2 RING ZnF UBP domain-containing protein 1 [Cucumis sativus]

6.2e-27

94.37

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Query:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN
        +RELASLKSRNE IHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKG RRR+
Subjt:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN

XP_008456935.1 PREDICTED: BRCA1-associated protein [Cucumis melo]

3.1e-26

92.96

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Query:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN
        +RELASLKSRNE IHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSP NGRKKKG RRR+
Subjt:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN

XP_022143225.1 BRCA1-associated protein [Momordica charantia]

1.5e-25

91.55

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Query:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN
        +RELASLKSR+E IHDLEEQIRDLTVYI AQKTL+NITDSDDIKGGTLLPVPAKESSPGN RKKKGGRRRN
Subjt:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN

XP_038889999.1 BRAP2 RING ZnF UBP domain-containing protein 1 [Benincasa hispida]

2.0e-25

91.55

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Query:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN
        +RELA LK RNE IHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSP NGRKKKG RRRN
Subjt:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIZ8 Uncharacterized protein

3.0e-27

94.37

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Query:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN
        +RELASLKSRNE IHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKG RRR+
Subjt:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN

A0A1S3C5L6 BRCA1-associated protein

1.5e-26

92.96

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Query:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN
        +RELASLKSRNE IHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSP NGRKKKG RRR+
Subjt:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN

A0A5D3BF17 BRCA1-associated protein

1.5e-26

92.96

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Query:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN
        +RELASLKSRNE IHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSP NGRKKKG RRR+
Subjt:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN

A0A6J1CN86 BRCA1-associated protein

7.3e-26

91.55

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Query:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN
        +RELASLKSR+E IHDLEEQIRDLTVYI AQKTL+NITDSDDIKGGTLLPVPAKESSPGN RKKKGGRRRN
Subjt:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN

A0A6J1KCX7 BRCA1-associated protein

5.3e-24

90.14

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Query:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN
        +RELASLKSRNE IHDLEEQIRDLTVYIEAQKTLN ITDSDDIKGGTLLPVPAKESSP +GR KKG RRRN
Subjt:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN

SwissProt top hits

e value

%identity

Alignment

E5KGE0 BRAP2 RING ZnF UBP domain-containing protein 1

3.5e-09

49.3

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Query:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNI-TDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRR
        +RE A L S++E I DL+EQIRD+TV+IEA+KTL  + +D+D I+ GT+LPVP       + R++K   RR
Subjt:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNI-TDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRR

Arabidopsis top hits

e value

%identity

Alignment

AT2G42160.1 zinc finger (ubiquitin-hydrolase) domain-containing protein

2.5e-10

49.3

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Query:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNI-TDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRR
        +RE A L S++E I DL+EQIRD+TV+IEA+KTL  + +D+D I+ GT+LPVP       + R++K   RR
Subjt:  DRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNI-TDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRR

Sequences

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CDS sequence

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ATGGGATTAACTCATTACACTTTGTATGACAGAGAACTCGCTTCGTTGAAGTCGAGGAATGAGACAATACATGATTTGGAAGAACAGATTAGAGATCTTACAGTCTACAT
TGAAGCCCAAAAGACACTCAATAACATCACAGATTCAGACGACATAAAAGGAGGAACACTCTTGCCTGTACCTGCAAAAGAATCTTCCCCCGGCAACGGCAGAAAGAAGA
AGGGTGGCCGAAGGCGGAATTAG

mRNA sequence

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Protein sequence

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MGLTHYTLYDRELASLKSRNETIHDLEEQIRDLTVYIEAQKTLNNITDSDDIKGGTLLPVPAKESSPGNGRKKKGGRRRN

Spg003671 (gene) of Sponge gourd (cylindrica) v1 genome