; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003693 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003693
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationscaffold4:45399678..45401440
RNA-Seq ExpressionSpg003693
SyntenySpg003693
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-5147.35Show/hide
Query:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDG---------------------
        L+  + L +A SLL+QI+ +AD++FT    S+IA  SH S  F ATLQ+  R FT YSVDH +++++SLESF  A+LDG                     
Subjt:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDG---------------------

Query:  ---ASGCPCLHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLH
           +S  P LH EL  SP Q E LGQV  GKFF + SK LR+II E   F +DLV V  T  +VKFSI SKEI +TKE+  C +VG+EGEDET+  IT  
Subjt:  ---ASGCPCLHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLH

Query:  PMSFFIDLTYKGNMIWFHKTTDSRCVLSTQVFQLYAEYAIYFPQM
        PM FF++ TYK N +WF+KTT+S+ V+S   F +Y +Y +YFP++
Subjt:  PMSFFIDLTYKGNMIWFHKTTDSRCVLSTQVFQLYAEYAIYFPQM

XP_023006010.1 uncharacterized protein LOC111498887 [Cucurbita maxima]1.3e-4242.98Show/hide
Query:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDGASGCPC---------------
        L + D L  A SLL+QI+ EADLKF+ S+FS+I   S+ S  F AT Q+  R+F  YSVD +H++R+SL+SF  A+ DG                     
Subjt:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDGASGCPC---------------

Query:  ---------LHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLH
                 +HR L  SPSQ E+LGQ+   +FF+I S+D R II     F  + ++V+ T  +VKF   S+E ILTKE   C ++G+EGE E  FQI L+
Subjt:  ---------LHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLH

Query:  PMSFFIDLTYKGNMIWFHKTTDSRCVLSTQVFQLYAEYAIYF
        P  FF +L+Y    IWF+KT DSRCV+    F L A+Y IYF
Subjt:  PMSFFIDLTYKGNMIWFHKTTDSRCVLSTQVFQLYAEYAIYF

XP_023548334.1 uncharacterized protein LOC111807002 [Cucurbita pepo subsp. pepo]4.9e-4242.98Show/hide
Query:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDGASGCPC---------------
        L + D L  A S+L+QI+ EADLKF+ S+FS+I   S+ SL F AT Q+  R+F  Y VD +H++R+SL+SF  A+  G                     
Subjt:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDGASGCPC---------------

Query:  ---------LHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLH
                 +HR L  SPSQ E+LGQ+   +FF+I S+D R I+     F  D ++V+ T  QVKF   S+E ILTKE   CV+VG+EG+ E  FQI L+
Subjt:  ---------LHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLH

Query:  PMSFFIDLTYKGNMIWFHKTTDSRCVLSTQVFQLYAEYAIYF
        P  FF +L+Y    IWF+KT DSRCV+    F L A+Y IYF
Subjt:  PMSFFIDLTYKGNMIWFHKTTDSRCVLSTQVFQLYAEYAIYF

XP_031744160.1 uncharacterized protein LOC116404808 [Cucumis sativus]1.4e-4143.8Show/hide
Query:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDG---------------------
        L+N +   +A S L+ IA EAD+KFTP  FSI  S       F A L +    F  Y VD+ HT+RISLESF  ALLDG                     
Subjt:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDG---------------------

Query:  --ASGCPCLHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLHP
          +S  P +  EL   PSQ EDLG++   KFF+I SK LRR+I     F  D + VT T+ QVKFSI SKEI+LTKE +EC++VG+EGE+ET+  I L+P
Subjt:  --ASGCPCLHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLHP

Query:  MSFFIDLTYKGNMIWFHKTTDSRCVLSTQVFQLYAEYAIYFP
        M FF++ T+    +WF+KTT     +    F  Y++Y I FP
Subjt:  MSFFIDLTYKGNMIWFHKTTDSRCVLSTQVFQLYAEYAIYFP

XP_038875055.1 uncharacterized protein LOC120067580 [Benincasa hispida]3.4e-4346.77Show/hide
Query:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDG---------------------
        L N + L +A S L+QI+  AD+KFTP EF +IA   + S  F ATLQL Q+ FT YSVDH HT+++ LESF  A+LDG                     
Subjt:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDG---------------------

Query:  ---ASGCPCLHRELMFSPSQGEDL---GQVVRGKFFAIYSKDLRRIIMEFSHFQED-LVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQ
           +S  P LH EL FSP Q  D    GQ+  GKFF + S+ LRRII E   FQ+D +V V  T  Q+KFSI SKEI+L  +A  C +VG E E ETQFQ
Subjt:  ---ASGCPCLHRELMFSPSQGEDL---GQVVRGKFFAIYSKDLRRIIMEFSHFQED-LVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQ

Query:  ITLHPMSFFIDLTYKGNMIWFHKT-TDSRCVLSTQVFQLYAEYAIYFP
        I L PM FF++ TYK N +WF+KT  +S  V++   F +  +Y IYFP
Subjt:  ITLHPMSFFIDLTYKGNMIWFHKT-TDSRCVLSTQVFQLYAEYAIYFP

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980101.7e-4047.42Show/hide
Query:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDGAS-------------------
        LE  + L +A SLL+Q+A +AD+KFTP    II   S+ S  F ATLQL +R FT +SVDH+ ++++SL+ F  A+LDG S                   
Subjt:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDGAS-------------------

Query:  -----GCPCLHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLH
               P LH EL  SP Q E+LGQV  G FF + S++LRRII E   F +D V VT T  QVKFSI SKEIILTKE   C +VG+EGE ET+ Q+ L 
Subjt:  -----GCPCLHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLH

Query:  PMSFFIDLTYKGN
        PM FF++ TY+ N
Subjt:  PMSFFIDLTYKGN

A0A1S3CL88 uncharacterized protein LOC1035022501.4e-3945.2Show/hide
Query:  LENCDLLENAASLLSQIA-GEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDGASGCPC--------------
        L+N D L +A S L+QI+   ADLKFTPS+F IIA  SH S  F ATLQL  ++FT +SVD+ H++++SLESF  A+LDG S                  
Subjt:  LENCDLLENAASLLSQIA-GEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDGASGCPC--------------

Query:  ----------LHRELMFSPSQGED--LGQ--VVRGKFFAIYSKDLRRIIMEFSHFQED-LVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQ
                  LH EL  SP Q ED  +GQ  +   K+F + SK LRRII +   FQ D ++ V  T  +VKFSI SKEIILT E   C + G E E ETQ
Subjt:  ----------LHRELMFSPSQGED--LGQ--VVRGKFFAIYSKDLRRIIMEFSHFQED-LVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQ

Query:  FQITLHPMSFFIDLTYKGNMIWFHKTTDSRCVLS-TQVFQLYAEYAIYFP
        FQI L PM FF++ TYK N +WF+KT ++   L     + ++ +Y IYFP
Subjt:  FQITLHPMSFFIDLTYKGNMIWFHKTTDSRCVLS-TQVFQLYAEYAIYFP

A0A6J1DM64 uncharacterized protein LOC1110222797.9e-3841.22Show/hide
Query:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDG---------------------
        L + D + NA S+L+Q++  AD  F+   FSII    + S  F ATLQ+ Q +F+ YSVD +   R+ + SFR A+L+G                     
Subjt:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDG---------------------

Query:  --ASGCPCLHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLHP
           S    L R+L  S SQ +DLG V + KFF+I+S D RRII E + +    ++ T T  QV+F I  +EI+LTKE   CV+ G++G  E QFQ++L P
Subjt:  --ASGCPCLHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLHP

Query:  MSFFIDLTYKGNMIWFHKTTDSR-CVLSTQVFQLYAEYAIYFPQM
        M FFI+L+Y+   IWF KTT+SR  V+    F  YA+Y IYFPQ+
Subjt:  MSFFIDLTYKGNMIWFHKTTDSR-CVLSTQVFQLYAEYAIYFPQM

A0A6J1H2Z8 uncharacterized protein LOC1114600114.5e-4142.15Show/hide
Query:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDGASGCPC---------------
        L + D L  A S+L+QI+ EADLKF+ S+FS+I S   H   F AT Q+  R+F  Y VD +H++R+SL+SF  A+  G                     
Subjt:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDGASGCPC---------------

Query:  ---------LHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLH
                 +HR L  SPSQ E+LGQ+   +FF+I S+D R II     F  + ++V+ T  +VKF   S+E ILTKE   CV+VG+EG+ E  FQI L+
Subjt:  ---------LHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLH

Query:  PMSFFIDLTYKGNMIWFHKTTDSRCVLSTQVFQLYAEYAIYF
        P  FF +L+Y    IWF+KT DSRCV+    F L A+Y IYF
Subjt:  PMSFFIDLTYKGNMIWFHKTTDSRCVLSTQVFQLYAEYAIYF

A0A6J1KZ05 uncharacterized protein LOC1114988876.3e-4342.98Show/hide
Query:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDGASGCPC---------------
        L + D L  A SLL+QI+ EADLKF+ S+FS+I   S+ S  F AT Q+  R+F  YSVD +H++R+SL+SF  A+ DG                     
Subjt:  LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDGASGCPC---------------

Query:  ---------LHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLH
                 +HR L  SPSQ E+LGQ+   +FF+I S+D R II     F  + ++V+ T  +VKF   S+E ILTKE   C ++G+EGE E  FQI L+
Subjt:  ---------LHRELMFSPSQGEDLGQVVRGKFFAIYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLH

Query:  PMSFFIDLTYKGNMIWFHKTTDSRCVLSTQVFQLYAEYAIYF
        P  FF +L+Y    IWF+KT DSRCV+    F L A+Y IYF
Subjt:  PMSFFIDLTYKGNMIWFHKTTDSRCVLSTQVFQLYAEYAIYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCGAGAACTGTGATCTTCTTGAAAATGCAGCCTCCCTACTCTCTCAAATCGCCGGCGAAGCCGACCTCAAATTCACACCGTCGGAGTTCTCCATAATCGCTTCACAGTC
CCACCATTCCCTTCCCTTCGCCGCAACGCTGCAATTGAGACAGCGATACTTCACCAAGTATTCCGTGGATCACAGCCACACTGCCAGAATTTCCCTTGAATCCTTCCGCC
AAGCTCTGTTGGATGGCGCAAGTGGTTGTCCATGCTTGCATCGTGAATTGATGTTCTCGCCTTCGCAAGGGGAGGATTTAGGCCAAGTTGTACGTGGGAAATTTTTTGCA
ATTTATTCTAAAGATTTAAGACGCATTATAATGGAATTCTCTCACTTTCAAGAAGATTTAGTTTATGTTACGCAAACGAAATTACAAGTGAAGTTTTCGATTCCATCTAA
GGAGATTATTCTTACCAAAGAGGCTGATGAATGTGTAATGGTAGGTCATGAAGGAGAAGACGAAACTCAATTCCAAATTACTCTCCATCCCATGTCATTTTTCATTGATC
TGACATATAAAGGGAATATGATATGGTTTCATAAAACAACTGATTCTCGCTGCGTACTTAGTACCCAAGTTTTTCAATTGTATGCTGAATATGCGATCTATTTTCCTCAA
ATGTGA
mRNA sequenceShow/hide mRNA sequence
CTCGAGAACTGTGATCTTCTTGAAAATGCAGCCTCCCTACTCTCTCAAATCGCCGGCGAAGCCGACCTCAAATTCACACCGTCGGAGTTCTCCATAATCGCTTCACAGTC
CCACCATTCCCTTCCCTTCGCCGCAACGCTGCAATTGAGACAGCGATACTTCACCAAGTATTCCGTGGATCACAGCCACACTGCCAGAATTTCCCTTGAATCCTTCCGCC
AAGCTCTGTTGGATGGCGCAAGTGGTTGTCCATGCTTGCATCGTGAATTGATGTTCTCGCCTTCGCAAGGGGAGGATTTAGGCCAAGTTGTACGTGGGAAATTTTTTGCA
ATTTATTCTAAAGATTTAAGACGCATTATAATGGAATTCTCTCACTTTCAAGAAGATTTAGTTTATGTTACGCAAACGAAATTACAAGTGAAGTTTTCGATTCCATCTAA
GGAGATTATTCTTACCAAAGAGGCTGATGAATGTGTAATGGTAGGTCATGAAGGAGAAGACGAAACTCAATTCCAAATTACTCTCCATCCCATGTCATTTTTCATTGATC
TGACATATAAAGGGAATATGATATGGTTTCATAAAACAACTGATTCTCGCTGCGTACTTAGTACCCAAGTTTTTCAATTGTATGCTGAATATGCGATCTATTTTCCTCAA
ATGTGA
Protein sequenceShow/hide protein sequence
LENCDLLENAASLLSQIAGEADLKFTPSEFSIIASQSHHSLPFAATLQLRQRYFTKYSVDHSHTARISLESFRQALLDGASGCPCLHRELMFSPSQGEDLGQVVRGKFFA
IYSKDLRRIIMEFSHFQEDLVYVTQTKLQVKFSIPSKEIILTKEADECVMVGHEGEDETQFQITLHPMSFFIDLTYKGNMIWFHKTTDSRCVLSTQVFQLYAEYAIYFPQ
M