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Spg003703 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003703
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncoiled-coil domain-containing protein SCD2 isoform X1
Genome locationscaffold4:45642523..45645078
RNA-Seq ExpressionSpg003703
SyntenySpg003703
Gene Ontology termsGO:0000911 - cytokinesis by cell plate formation (biological process)
InterPro domainsIPR040321 - Coiled-coil domain-containing protein SCD2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008455538.1 PREDICTED: coiled-coil domain-containing protein SCD2 isoform X1 [Cucumis melo]3.8e-3589.87Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF
        AWLTYFW+RAK +ELEPDIADERLEFWINHNNKS+SHDAVDVERGL+E+RKLGIENQLWERSRRGLE+NPNR+PRQSDF
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF

XP_011648785.1 coiled-coil domain-containing protein SCD2 [Cucumis sativus]5.5e-3488.61Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF
        AWLTYFW+RAK +ELEPDIADERLEFWINH NKS+SHDAVDVERGLIE+RKLGIENQLWERSRRGLE+NPNR+P QSDF
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF

XP_022143146.1 coiled-coil domain-containing protein SCD2-like isoform X1 [Momordica charantia]4.2e-3488.61Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF
        AWLTYFWRRAKN ELEPDIA+ERLEFWINHNNKS+SHDAVDVERGL E+RKLGIE QLW++SR+GLELNPNRKPRQSDF
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF

XP_023537930.1 coiled-coil domain-containing protein SCD2 isoform X2 [Cucurbita pepo subsp. pepo]1.6e-3389.87Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF
        AWLTYFWRRAKNEELEPDI  ERLEFWINH+NK SSHDAVDVERGLIE+RKLGIENQLWE SRRGLE+N NRKPRQSDF
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF

XP_038891160.1 coiled-coil domain-containing protein SCD2-like isoform X1 [Benincasa hispida]1.2e-3693.67Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF
        AWLTYFWRRA+N+ELEPDIADERLEFWINHNNKS+SHDAVDVERGLIE+RKLGIENQLWERSRRGLE+NPNRKPRQSDF
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF

TrEMBL top hitse value%identityAlignment
A0A0A0LJG0 Uncharacterized protein2.7e-3488.61Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF
        AWLTYFW+RAK +ELEPDIADERLEFWINH NKS+SHDAVDVERGLIE+RKLGIENQLWERSRRGLE+NPNR+P QSDF
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF

A0A1S3C153 coiled-coil domain-containing protein SCD2 isoform X11.9e-3589.87Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF
        AWLTYFW+RAK +ELEPDIADERLEFWINHNNKS+SHDAVDVERGL+E+RKLGIENQLWERSRRGLE+NPNR+PRQSDF
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF

A0A6J1CPD7 coiled-coil domain-containing protein SCD2-like isoform X12.0e-3488.61Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF
        AWLTYFWRRAKN ELEPDIA+ERLEFWINHNNKS+SHDAVDVERGL E+RKLGIE QLW++SR+GLELNPNRKPRQSDF
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF

A0A6J1FI09 coiled-coil domain-containing protein SCD2 isoform X11.0e-3389.87Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF
        AWLTYFWRRAKNEELEPDI  ERLEFWINH+NK SSHDAVDVERGLIE+RKLGIENQLWE SRRGLE+N NRKPRQSDF
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF

A0A6J1HKU2 coiled-coil domain-containing protein SCD2-like isoform X19.5e-3289.47Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQ
        AWLTYFWRRAKNEELEPDI  ERLEFWINH+NK SSHDAVDVERGLIE+RKLGIENQLWE SRRGLE+N NRKPRQ
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQ

SwissProt top hitse value%identityAlignment
Q8RWD5 Coiled-coil domain-containing protein SCD25.8e-1858.11Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHN---NKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPN
        AWL YFW RAK   +E DIA+ER++ WI+ +   ++++SHDA+DVERGLIE+RKLGIE QLWE SRR ++  P+
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHN---NKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPN

Arabidopsis top hitse value%identityAlignment
AT3G48860.2 unknown protein4.1e-1958.11Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHN---NKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPN
        AWL YFW RAK   +E DIA+ER++ WI+ +   ++++SHDA+DVERGLIE+RKLGIE QLWE SRR ++  P+
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHN---NKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPN

AT4G08630.1 unknown protein8.0e-2363.89Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKS-SSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPN
        AWL+YFWRRAKN E+E D+ DERL++WIN   +S +S DAVDVERGL+E+RKL IE+QLW++SR+GL+   N
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKS-SSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPN

AT4G25070.1 unknown protein2.8e-2067.16Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINH-NNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGL
        AWL YFW+RAK   +E DIA+ERL+FWIN     SSSHDA+DVERG+ E+RKLGIE QLWE SR+ L
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINH-NNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGL

AT4G25070.2 unknown protein2.8e-2067.16Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINH-NNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGL
        AWL YFW+RAK   +E DIA+ERL+FWIN     SSSHDA+DVERG+ E+RKLGIE QLWE SR+ L
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINH-NNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGL

AT5G23700.1 unknown protein2.2e-1755.84Show/hide
Query:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSS--SHDAVDVERGLIEMRKLGIENQLWERSRRGL-ELNPNRKP
        AWL YFW RAK   +E DIADER +FW + +   S  S DAVDVERGL+E+RKLG+E QLWE  R+   +L P+  P
Subjt:  AWLTYFWRRAKNEELEPDIADERLEFWINHNNKSS--SHDAVDVERGLIEMRKLGIENQLWERSRRGL-ELNPNRKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGAAAATCAATTGCTTGGCTCACTTATTTCTGGAGGAGAGCAAAAAATGAAGAACTTGAACCAGACATTGCAGATGAACGTTTGGAGTTCTGGATCAACCACAA
TAATAAATCCTCTTCTCATGATGCCGTTGATGTTGAACGTGGGCTCATAGAGATGAGGAAGCTAGGTATTGAAAACCAGCTATGGGAAAGATCTCGCAGAGGGCTAGAGC
TGAACCCTAACCGCAAACCTCGTCAATCTGACTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGAAAATCAATTGCTTGGCTCACTTATTTCTGGAGGAGAGCAAAAAATGAAGAACTTGAACCAGACATTGCAGATGAACGTTTGGAGTTCTGGATCAACCACAA
TAATAAATCCTCTTCTCATGATGCCGTTGATGTTGAACGTGGGCTCATAGAGATGAGGAAGCTAGGTATTGAAAACCAGCTATGGGAAAGATCTCGCAGAGGGCTAGAGC
TGAACCCTAACCGCAAACCTCGTCAATCTGACTTCTGA
Protein sequenceShow/hide protein sequence
MVGKSIAWLTYFWRRAKNEELEPDIADERLEFWINHNNKSSSHDAVDVERGLIEMRKLGIENQLWERSRRGLELNPNRKPRQSDF