; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003723 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003723
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase RING1-like
Genome locationscaffold4:48539574..48539939
RNA-Seq ExpressionSpg003723
SyntenySpg003723
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586449.1 E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]9.0e-4677.05Show/hide
Query:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF
        MAA LPE T SA AASYIMD+ESMFDLDTVLTGADD+Y D+ +T PPSVVV D PTV  DDVCAVCME+FR DEGGK IPCGHVYHQTC+SSWLSV GD 
Subjt:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF

Query:  CPLCRRHVSSGDKTEAPKTVQV
        CPLCR HVSS +K+E  K VQV
Subjt:  CPLCRRHVSSGDKTEAPKTVQV

KAG7021303.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.1e-4677.87Show/hide
Query:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF
        MAA LPE T SA AASYIMD+ESMFDLDTVLTGADD+Y D+ +T PPSVVV DLPTV  DDVCAVCME+FR DEGGK IPCGHVYHQTC+SSWLSV GD 
Subjt:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF

Query:  CPLCRRHVSSGDKTEAPKTVQV
        CPLCR HVSS +K+E  K VQV
Subjt:  CPLCRRHVSSGDKTEAPKTVQV

XP_022965415.1 E3 ubiquitin-protein ligase RNF181-like [Cucurbita maxima]1.2e-4577.05Show/hide
Query:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDK-TVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDF
        MAA LPE T SA AASYIMD+ESMFDLDTVLTGADD+Y D+  +T PPSVVV+DLPTV  DDVCAVCME+FR DEGGK IPCGHVYHQ+C+SSWLSVGD 
Subjt:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDK-TVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDF

Query:  CPLCRRHVSSGDKTEAPKTVQV
        CPLCR HVSS +K E  K VQV
Subjt:  CPLCRRHVSSGDKTEAPKTVQV

XP_023537996.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]1.3e-4778.51Show/hide
Query:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFC
        MAA LPE T SA AASYIMD+ESMFDLDTVLTGADD+Y D+ +T PPSVVV DLPTV  DDVCAVCME+FR DEGGK IPCGHVYHQTC+SSWLSVGD C
Subjt:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFC

Query:  PLCRRHVSSGDKTEAPKTVQV
        PLCR HVSS +K+E  K VQV
Subjt:  PLCRRHVSSGDKTEAPKTVQV

XP_038877426.1 E3 ubiquitin-protein ligase RNF126-like [Benincasa hispida]3.6e-4779.34Show/hide
Query:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFC
        MA  LPE TTSA AASYIMDIESMFDLDTVLTGADDFYY+KTV  PP VVV DLPTVA  DVCAVC+EDF PDE GK IPCGHVYHQ+CLSSWLSVGD C
Subjt:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFC

Query:  PLCRRHVSSGDKTEAPKTVQV
        PLCRRH++S ++ EAPKT  V
Subjt:  PLCRRHVSSGDKTEAPKTVQV

TrEMBL top hitse value%identityAlignment
A0A0A0LEZ1 RING-type domain-containing protein9.0e-4478.07Show/hide
Query:  TTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTV-AADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHV
        T++  AASYIMDIESMFDLDTVLTGADDFYY  TV  PP V+V +LPTV AADDVCAVCMEDF PDEGGK IPCGHVYHQ+CLSSWLS+ D CPLCR H+
Subjt:  TTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTV-AADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHV

Query:  SSGDKTEAPKTVQV
        + GDKTE  KTVQV
Subjt:  SSGDKTEAPKTVQV

A0A5A7V793 RING-H2 finger protein ATL5-like2.2e-4577.88Show/hide
Query:  TTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVS
        T++  AA YIMDIESMFDLDTVL+GADDFYY  T   PP VVV DLPTVA DD CAVCMEDF PDEGGK IPCGHVYHQ+C+SSWLSVGD CPLCRRH++
Subjt:  TTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVS

Query:  SGDKTEAPKTVQV
         GDKTE  KTVQV
Subjt:  SGDKTEAPKTVQV

A0A6J1DM93 E3 ubiquitin-protein ligase RHA1B-like1.4e-2359.43Show/hide
Query:  AALPETTTSASAASYIMDIESMFDLDTVLTGADDF-YYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCP
        A L ETT + +AA     +E +FDLD VL+G DDF     T       +V DLPTV A DVCAVC EDFR DEGGK IPCGHVYH+ C+SSWL+V D CP
Subjt:  AALPETTTSASAASYIMDIESMFDLDTVLTGADDF-YYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCP

Query:  LCRRHV
        LCRR V
Subjt:  LCRRHV

A0A6J1FDN7 E3 ubiquitin-protein ligase RING1-like5.7e-4677.05Show/hide
Query:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF
        MAA LPE T SA AA YIMD+ESMFDLDTVLTGADD+Y D+ +T PPSVVV DLPTV  DDVCAVCME+FR DEGGK IPCGHVYHQTC+SSWLSV GD 
Subjt:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDF

Query:  CPLCRRHVSSGDKTEAPKTVQV
        CPLCR HVSS +K+E  K VQV
Subjt:  CPLCRRHVSSGDKTEAPKTVQV

A0A6J1HNM2 E3 ubiquitin-protein ligase RNF181-like5.7e-4677.05Show/hide
Query:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDK-TVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDF
        MAA LPE T SA AASYIMD+ESMFDLDTVLTGADD+Y D+  +T PPSVVV+DLPTV  DDVCAVCME+FR DEGGK IPCGHVYHQ+C+SSWLSVGD 
Subjt:  MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDK-TVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDF

Query:  CPLCRRHVSSGDKTEAPKTVQV
        CPLCR HVSS +K E  K VQV
Subjt:  CPLCRRHVSSGDKTEAPKTVQV

SwissProt top hitse value%identityAlignment
Q8LPN7 E3 ubiquitin-protein ligase RING1-like4.1e-0940.26Show/hide
Query:  TPPPSVVVTD-LPTVAAD--------DVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGD
        TPP S    D LPTV           + CAVCM++F      K +PC HV+HQ CL  WL + + CP+CR  + + D
Subjt:  TPPPSVVVTD-LPTVAAD--------DVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGD

Q9D0C1 E3 ubiquitin-protein ligase RNF1158.2e-1035.9Show/hide
Query:  PPPS--VVVTDLPTVAADD-------VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGDKT
        PPP+    +T LPTV            C VC ED+  +E  + +PC H +H +C+  WL + D CP+CR+ ++  D T
Subjt:  PPPS--VVVTDLPTVAADD-------VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGDKT

Q9M622 Receptor homology region, transmembrane domain- and RING domain-containing protein 12.4e-0935.29Show/hide
Query:  KTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDFCPLCRRHV------SSGDKTEAPKT
        K V   P    TD     A + CA+C+ED+R  E  +++PC H +H  C+ SWL+  G  CP+C+  +      S   K E+P+T
Subjt:  KTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDFCPLCRRHV------SSGDKTEAPKT

Q9VHI7 E3 ubiquitin-protein ligase Iruka5.3e-0932.97Show/hide
Query:  LDTVLTGADDFYYDKTVTPPP--SVVVTDLPTVA--ADDV-----CAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVS
        LDT++T        +T  PPP  +  + ++P V   A++V     C++C +DF+ DE  + +PC H+YH+ C+  WL++   CP+CR+ ++
Subjt:  LDTVLTGADDFYYDKTVTPPP--SVVVTDLPTVA--ADDV-----CAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVS

Q9Y4L5 E3 ubiquitin-protein ligase RNF1153.7e-1032.94Show/hide
Query:  PPPS--VVVTDLPTVAADD-------VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGDKTEAPKTVQ
        PPP+    +T LPTV            C VC ED+  +E  + +PC H +H +C+  WL + D CP+CR+ ++  D T   ++ +
Subjt:  PPPS--VVVTDLPTVAADD-------VCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGDKTEAPKTVQ

Arabidopsis top hitse value%identityAlignment
AT1G68180.1 RING/U-box superfamily protein1.5e-1133Show/hide
Query:  FDLDTVLTGADDFYYD----KTVTPPP----------SVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSG
        F+ D ++   D+ + D      + PPP          +V++TD   +  + VCA+C E+F   E GK + C H+YH +C+ SWL++ + CP+CR  V+ G
Subjt:  FDLDTVLTGADDFYYD----KTVTPPP----------SVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSG

AT3G19950.1 RING/U-box superfamily protein2.9e-1040.26Show/hide
Query:  TPPPSVVVTD-LPTVAAD--------DVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGD
        TPP S    D LPTV           + CAVCM++F      K +PC HV+HQ CL  WL + + CP+CR  + + D
Subjt:  TPPPSVVVTD-LPTVAAD--------DVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGD

AT3G56580.1 RING/U-box superfamily protein1.4e-0929.73Show/hide
Query:  PSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGDKTEAPKTVQ
        P++ +T     ++D  C VC ++F      K +PC H+YH  C+  WL   + CP+CR+ + S   + + ++ Q
Subjt:  PSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGDKTEAPKTVQ

AT3G56580.2 RING/U-box superfamily protein1.4e-0929.73Show/hide
Query:  PSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGDKTEAPKTVQ
        P++ +T     ++D  C VC ++F      K +PC H+YH  C+  WL   + CP+CR+ + S   + + ++ Q
Subjt:  PSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSGDKTEAPKTVQ

AT5G66160.1 receptor homology region transmembrane domain ring H2 motif protein 11.7e-1035.29Show/hide
Query:  KTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDFCPLCRRHV------SSGDKTEAPKT
        K V   P    TD     A + CA+C+ED+R  E  +++PC H +H  C+ SWL+  G  CP+C+  +      S   K E+P+T
Subjt:  KTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSV-GDFCPLCRRHV------SSGDKTEAPKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTGCCTTGCCTGAAACAACAACATCAGCTTCTGCAGCGAGCTACATCATGGACATCGAGTCGATGTTCGACCTCGACACGGTCCTCACCGGAGCCGATGACTT
CTACTACGATAAGACCGTCACACCGCCGCCATCGGTGGTGGTTACCGACTTGCCGACGGTGGCAGCTGACGACGTATGTGCGGTTTGCATGGAGGATTTCCGGCCGGACG
AAGGTGGTAAAATGATCCCCTGCGGCCACGTGTACCATCAAACTTGTCTATCCTCATGGCTCTCCGTCGGCGACTTTTGCCCTCTCTGCCGCCGCCATGTCTCCTCCGGC
GACAAGACGGAGGCGCCGAAGACCGTACAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCTGCCTTGCCTGAAACAACAACATCAGCTTCTGCAGCGAGCTACATCATGGACATCGAGTCGATGTTCGACCTCGACACGGTCCTCACCGGAGCCGATGACTT
CTACTACGATAAGACCGTCACACCGCCGCCATCGGTGGTGGTTACCGACTTGCCGACGGTGGCAGCTGACGACGTATGTGCGGTTTGCATGGAGGATTTCCGGCCGGACG
AAGGTGGTAAAATGATCCCCTGCGGCCACGTGTACCATCAAACTTGTCTATCCTCATGGCTCTCCGTCGGCGACTTTTGCCCTCTCTGCCGCCGCCATGTCTCCTCCGGC
GACAAGACGGAGGCGCCGAAGACCGTACAAGTTTAG
Protein sequenceShow/hide protein sequence
MAAALPETTTSASAASYIMDIESMFDLDTVLTGADDFYYDKTVTPPPSVVVTDLPTVAADDVCAVCMEDFRPDEGGKMIPCGHVYHQTCLSSWLSVGDFCPLCRRHVSSG
DKTEAPKTVQV