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Spg003779 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003779
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionBHLH domain-containing protein
Genome locationscaffold4:48952697..48953383
RNA-Seq ExpressionSpg003779
SyntenySpg003779
Gene Ontology termsNA
InterPro domainsIPR044658 - Transcription factor bHLH92/bHLH041-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023537999.1 uncharacterized protein LOC111798884 [Cucurbita pepo subsp. pepo]2.1e-3167.8Show/hide
Query:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFR-EDANQASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQES
        M+ VFSLDEA RA+F  AIMQSFH TYICL          LLNLD  FR EDANQ SSSLGSFERRLFDEY+QL+F+VENN VPGHAF N+ISFLE+ +S
Subjt:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFR-EDANQASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQES

Query:  ALQTNSSSQIQRQFYAVS
         L  +SSSQIQ  FYA +
Subjt:  ALQTNSSSQIQRQFYAVS

XP_038890718.1 putative transcription factor bHLH041 isoform X1 [Benincasa hispida]5.5e-3269.17Show/hide
Query:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFRED---ANQASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQ
        ME VFSL +AARA+F  +IMQSFHSTYI L          LLNLDGF+ ED     Q SSSLGSFERRLF+EY QLIF++EN+ VPG+AFKNNISFLEVQ
Subjt:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFRED---ANQASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQ

Query:  ESALQTNSSSQIQRQFYAVS
        ES LQT+SSSQIQRQFYA +
Subjt:  ESALQTNSSSQIQRQFYAVS

XP_038890719.1 putative transcription factor bHLH041 isoform X2 [Benincasa hispida]7.2e-3270.34Show/hide
Query:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFRED---ANQASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQ
        ME VFSL +AARA+F  +IMQSFHSTYI L          LLNLDGF+ ED     Q SSSLGSFERRLF+EY QLIF++EN+ VPG+AFKNNISFLEVQ
Subjt:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFRED---ANQASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQ

Query:  ESALQTNSSSQIQRQFYA
        ES LQT+SSSQIQRQFYA
Subjt:  ESALQTNSSSQIQRQFYA

XP_038890720.1 putative transcription factor bHLH041 isoform X3 [Benincasa hispida]5.5e-3269.17Show/hide
Query:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFRED---ANQASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQ
        ME VFSL +AARA+F  +IMQSFHSTYI L          LLNLDGF+ ED     Q SSSLGSFERRLF+EY QLIF++EN+ VPG+AFKNNISFLEVQ
Subjt:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFRED---ANQASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQ

Query:  ESALQTNSSSQIQRQFYAVS
        ES LQT+SSSQIQRQFYA +
Subjt:  ESALQTNSSSQIQRQFYAVS

XP_038890721.1 putative transcription factor bHLH041 isoform X4 [Benincasa hispida]5.5e-3269.17Show/hide
Query:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFRED---ANQASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQ
        ME VFSL +AARA+F  +IMQSFHSTYI L          LLNLDGF+ ED     Q SSSLGSFERRLF+EY QLIF++EN+ VPG+AFKNNISFLEVQ
Subjt:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFRED---ANQASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQ

Query:  ESALQTNSSSQIQRQFYAVS
        ES LQT+SSSQIQRQFYA +
Subjt:  ESALQTNSSSQIQRQFYAVS

TrEMBL top hitse value%identityAlignment
A0A1S3C9K1 putative transcription factor bHLH041 isoform X21.9e-2561.48Show/hide
Query:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFREDAN-----QASSSLGSFERRLFDEYRQLIFHVENN--FVPGHAFKNNISF
        ME VFS ++ ARAS  H+IMQS  S+Y+CL          L+NL G FRED +     Q SSSLGS +RRLF++Y QLIF++ENN   VPGHAFKNNISF
Subjt:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFREDAN-----QASSSLGSFERRLFDEYRQLIFHVENN--FVPGHAFKNNISF

Query:  LEVQESALQTNSSSQIQRQFYA
        LEVQES L T+SSSQIQ QFYA
Subjt:  LEVQESALQTNSSSQIQRQFYA

A0A1S3CAK0 putative transcription factor bHLH041 isoform X11.9e-2560.48Show/hide
Query:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFREDAN-----QASSSLGSFERRLFDEYRQLIFHVENN--FVPGHAFKNNISF
        ME VFS ++ ARAS  H+IMQS  S+Y+CL          L+NL G FRED +     Q SSSLGS +RRLF++Y QLIF++ENN   VPGHAFKNNISF
Subjt:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFREDAN-----QASSSLGSFERRLFDEYRQLIFHVENN--FVPGHAFKNNISF

Query:  LEVQESALQTNSSSQIQRQFYAVS
        LEVQES L T+SSSQIQ QFYA +
Subjt:  LEVQESALQTNSSSQIQRQFYAVS

A0A6J1DKX4 putative transcription factor bHLH0416.8e-2858.68Show/hide
Query:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC-------FLLNLDGFFRE-----DANQASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEV
        ++ VFSLDE +RA+F   +M SFH  YIC+         LLNLD  +RE     D  QASSSLGSF+RRLF++Y QL+F+V+NN VPGHAF NNISFLE+
Subjt:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC-------FLLNLDGFFRE-----DANQASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEV

Query:  QESALQTNSSSQIQRQFYAVS
        +ES LQT++S QIQRQFYA +
Subjt:  QESALQTNSSSQIQRQFYAVS

A0A6J1FCH4 uncharacterized protein LOC1114441436.6e-3167.5Show/hide
Query:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFRE-DANQASSSLGSFERRLFDEYRQLIFHVENN--FVPGHAFKNNISFLEVQ
        M+ VFSLDEA RA+F  AIMQSFH TYICL          LLNLD  FRE DANQ SSSLGSFERRLFDEY+QL+F+VENN   VPGHAF NNI FLE+ 
Subjt:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFRE-DANQASSSLGSFERRLFDEYRQLIFHVENN--FVPGHAFKNNISFLEVQ

Query:  ESALQTNSSSQIQRQFYAVS
        +S L T+SSSQIQ  FYA +
Subjt:  ESALQTNSSSQIQRQFYAVS

A0A6J1HKA4 uncharacterized protein LOC1114653354.7e-2964.52Show/hide
Query:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFRE-DANQASSSLGSFERRLFDEYRQLIFHVENN------FVPGHAFKNNISF
        M+ VFSLDEA RA+F  AIMQSFH TYICL          LLNLD  FRE DANQ SSSLGSFERRLFDEY+ LIF VENN       VPGHAF NNI F
Subjt:  MEFVFSLDEAARASFFHAIMQSFHSTYICLC--------FLLNLDGFFRE-DANQASSSLGSFERRLFDEYRQLIFHVENN------FVPGHAFKNNISF

Query:  LEVQESALQTNSSSQIQRQFYAVS
        LE+ +S L  +SSSQIQ  FYA +
Subjt:  LEVQESALQTNSSSQIQRQFYAVS

SwissProt top hitse value%identityAlignment
Q9LTS4 Putative transcription factor bHLH0411.5e-0835.8Show/hide
Query:  FLLNLDGFFREDANQ--ASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQESALQTNSSSQIQRQFYAVSV
        +L+++DG++ E + +  +SSS GS  R LF EYRQ +  ++N  VP  AF NN+ ++E++    Q  + +  QR FY + +
Subjt:  FLLNLDGFFREDANQ--ASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQESALQTNSSSQIQRQFYAVSV

Arabidopsis top hitse value%identityAlignment
AT5G56960.1 basic helix-loop-helix (bHLH) DNA-binding family protein1.1e-0935.8Show/hide
Query:  FLLNLDGFFREDANQ--ASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQESALQTNSSSQIQRQFYAVSV
        +L+++DG++ E + +  +SSS GS  R LF EYRQ +  ++N  VP  AF NN+ ++E++    Q  + +  QR FY + +
Subjt:  FLLNLDGFFREDANQ--ASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQESALQTNSSSQIQRQFYAVSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTTGTATTTTCCCTGGACGAGGCTGCTAGAGCCTCCTTCTTCCATGCCATTATGCAATCTTTTCACTCCACTTACATTTGCCTTTGTTTTTTGTTGAATCTTGA
TGGGTTTTTCCGGGAGGATGCGAATCAAGCGAGCAGTTCTTTGGGGAGTTTCGAACGGAGGCTCTTCGACGAGTACAGGCAATTGATATTTCATGTCGAAAACAACTTTG
TCCCTGGTCATGCTTTCAAGAACAACATTTCCTTTTTAGAGGTTCAGGAATCTGCGCTTCAAACCAATTCTTCGTCTCAAATCCAAAGGCAATTTTATGCTGTAAGTGTA
AGAGAATGTTCGGAAATGATTTTAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTTGTATTTTCCCTGGACGAGGCTGCTAGAGCCTCCTTCTTCCATGCCATTATGCAATCTTTTCACTCCACTTACATTTGCCTTTGTTTTTTGTTGAATCTTGA
TGGGTTTTTCCGGGAGGATGCGAATCAAGCGAGCAGTTCTTTGGGGAGTTTCGAACGGAGGCTCTTCGACGAGTACAGGCAATTGATATTTCATGTCGAAAACAACTTTG
TCCCTGGTCATGCTTTCAAGAACAACATTTCCTTTTTAGAGGTTCAGGAATCTGCGCTTCAAACCAATTCTTCGTCTCAAATCCAAAGGCAATTTTATGCTGTAAGTGTA
AGAGAATGTTCGGAAATGATTTTAGAATGA
Protein sequenceShow/hide protein sequence
MEFVFSLDEAARASFFHAIMQSFHSTYICLCFLLNLDGFFREDANQASSSLGSFERRLFDEYRQLIFHVENNFVPGHAFKNNISFLEVQESALQTNSSSQIQRQFYAVSV
RECSEMILE