; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg003798 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg003798
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6
Genome locationscaffold4:48276286..48279819
RNA-Seq ExpressionSpg003798
SyntenySpg003798
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586435.1 hypothetical protein SDJN03_19168, partial [Cucurbita argyrosperma subsp. sororia]1.8e-3088.17Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ
        MASLKAVSRLSSRLHSLASKLNKRSSSS+ SPFKSTC+S+ SA STSRL CTSRLPLELSSQGSLMPLHS I+AARLISSL IE+RGWGLVPQ
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ

KAG7021289.1 hypothetical protein SDJN02_17977 [Cucurbita argyrosperma subsp. argyrosperma]8.2e-3189.25Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ
        MASLKAVSRLSSRLHSLASKLNKRSSSS+ SPFKSTC+S+ SA STSRL CTSRLPLELSSQGSLMPLHS IAAARLISSL IE+RGWGLVPQ
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ

KAG7030432.1 hypothetical protein SDJN02_08779, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-3087.1Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ
        MASL+AVSRLSSRL SLA KLNKRS SSELSPFKS C+SQPSAASTSR+ CTSRLPLELSSQGSLMPLHS IAAARLISSL+IE++GWGLVPQ
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ

XP_023547330.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo]1.8e-3087.1Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ
        MASL+AVSRLSSRL SLA KLNKRS SSELSPFKS+C+SQPSAASTSR+ CTSRLPLELSSQGSLMPLHS IAAARLISSL+IE++GWGLVPQ
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ

XP_038889658.1 uncharacterized protein LOC120079520 [Benincasa hispida]1.8e-3087.1Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ
        MASLK VSRLSSRL SLA K NKRSS SELSPFKS C+SQPS ASTSRLPCTSRLP+ELSSQGSLMPLHS IAAARLISSLTIE++GWGLVPQ
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ

TrEMBL top hitse value%identityAlignment
A0A0A0LKT5 Uncharacterized protein2.0e-3088.17Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ
        MASLKAVSRLSSRL SLA K NKRSSSSEL  FKSTC+SQPSAASTSRL CTSRLP+ELSSQGSLMPLHS IAAARLISSLTIE++GWGLVPQ
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ

A0A6J1FCN7 uncharacterized protein LOC1114444079.8e-3088.17Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ
        MASLKAVSRLSSRLHSLASKLNKRSSSS+ SPFKST +S+ SA STSRL CTSRLPLELSSQGSLMPLHS IAAARLISSL IE+RGWGLVPQ
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ

A0A6J1G399 uncharacterized protein LOC1114503801.2e-3087.1Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ
        MASL+AVSRLSSRL SLA KLNKRS SSELSPFKS C+SQPSAASTSR+ CTSRLPLELSSQGSLMPLHS IAAARLISSL+IE++GWGLVPQ
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ

A0A6J1HLX3 uncharacterized protein LOC1114657371.2e-3087.1Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ
        MASL+AVSR+SSRLHSLASKLNKRSSSS+ SPFKSTC+S+ SA STSRL CTSRLPLELSSQGSLMPLHS IA+ARLISSLTIE+RGWGLVPQ
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ

A0A6J1KDE2 uncharacterized protein LOC1114938764.4e-3086.02Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ
        MASL+AVSRLSSRL SLA KLNKRS SSELSPFKS+C+SQPSAAS SR+ CTSRLPLELSSQGSLMPLHS IAAARLISSL+IE++GWGLVPQ
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein3.4e-1450.54Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ
        MAS   + RLSS++HSL  KL+K  ++  +S   S  KS   +++TSR+  + RLP+ELS   S++PLHS IA+ARLISSL++E++ WGLVPQ
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ

AT1G55205.2 unknown protein4.0e-1548.08Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQAYAYVST
        MAS   + RLSS++HSL  KL+K  ++  +S   S  KS   +++TSR+  + RLP+ELS   S++PLHS IA+ARLISSL++E++ WGLVPQ  ++ S 
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQAYAYVST

Query:  LLIY
         L Y
Subjt:  LLIY

AT3G13674.1 unknown protein3.1e-1252.63Show/hide
Query:  MASLKAVSRLSSRLHSLASKL-NKRSSSSEL-SPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ
        MAS + + R SSRL SL   L NK ++ S L SP KS   + PS+A++ RL  +SRLP+ELS   S++PLHS IA++RL+SSL++E++ WGLVPQ
Subjt:  MASLKAVSRLSSRLHSLASKL-NKRSSSSEL-SPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTTAAAGGCAGTCTCTCGTTTATCATCTCGCTTGCACTCTCTCGCTTCAAAGCTCAACAAAAGGTCTTCATCTTCTGAGCTATCTCCATTCAAATCGACTTG
TAAATCTCAGCCCTCCGCAGCTTCTACGTCGCGTCTTCCTTGCACTTCGCGGTTGCCATTAGAGTTGAGTAGCCAGGGGTCATTGATGCCATTGCACAGCACCATAGCTG
CAGCAAGATTGATTTCGAGTCTGACCATTGAAGCTCGAGGATGGGGTTTAGTTCCTCAGGCTTATGCTTATGTGTCGACTCTTCTAATTTATCACCCAGCTGCAAAGTAT
ACTGAAGTGCTGTATTTCAATGCCTTTATGACAGTTCTGCTTTGCAGGAAGTTGTTCTCTACAGGACCTTTATGCAGCCAAGTATTGTTCATCGCAAAGGATGTATGCAA
CTACCATGATTGTTGGAGTTATTACTATTGGAAAGCACACGGCATGCTGAATTTTATGATTGATGATGTATGTATGCCTTTGAATGACATATTGTCTCATAACAACAGCA
AGGACGACAATAGCAAGGACTCAGAGCAGAAATGCAGTCATATATATGGAGCGAATCCTAAGGTTCTCTTTTATGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCTTAAAGGCAGTCTCTCGTTTATCATCTCGCTTGCACTCTCTCGCTTCAAAGCTCAACAAAAGGTCTTCATCTTCTGAGCTATCTCCATTCAAATCGACTTG
TAAATCTCAGCCCTCCGCAGCTTCTACGTCGCGTCTTCCTTGCACTTCGCGGTTGCCATTAGAGTTGAGTAGCCAGGGGTCATTGATGCCATTGCACAGCACCATAGCTG
CAGCAAGATTGATTTCGAGTCTGACCATTGAAGCTCGAGGATGGGGTTTAGTTCCTCAGGCTTATGCTTATGTGTCGACTCTTCTAATTTATCACCCAGCTGCAAAGTAT
ACTGAAGTGCTGTATTTCAATGCCTTTATGACAGTTCTGCTTTGCAGGAAGTTGTTCTCTACAGGACCTTTATGCAGCCAAGTATTGTTCATCGCAAAGGATGTATGCAA
CTACCATGATTGTTGGAGTTATTACTATTGGAAAGCACACGGCATGCTGAATTTTATGATTGATGATGTATGTATGCCTTTGAATGACATATTGTCTCATAACAACAGCA
AGGACGACAATAGCAAGGACTCAGAGCAGAAATGCAGTCATATATATGGAGCGAATCCTAAGGTTCTCTTTTATGGATGA
Protein sequenceShow/hide protein sequence
MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCKSQPSAASTSRLPCTSRLPLELSSQGSLMPLHSTIAAARLISSLTIEARGWGLVPQAYAYVSTLLIYHPAAKY
TEVLYFNAFMTVLLCRKLFSTGPLCSQVLFIAKDVCNYHDCWSYYYWKAHGMLNFMIDDVCMPLNDILSHNNSKDDNSKDSEQKCSHIYGANPKVLFYG